EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000000425 (Gene tree)
Gene ID
108265821
Gene Symbol
Ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
14550 bases
Position
chr5:19821482-19836031
Accession
108265821
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000000560YTHPF04146.159.5e-4111
ENSIPUP00000000563YTHPF04146.159.8e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000000606-2946XM_017468549ENSIPUP00000000560610 (aa)XP_017324038W5U697
ENSIPUT00000000609-1635-ENSIPUP00000000563544 (aa)--
Gene Model
Click here to download ENSIPUG00000000425's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000425's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000000425Ythdf19957.433ENSIPUG00000011114ythdf210055.832
ENSIPUG00000000425Ythdf19461.607ENSIPUG00000014157YTHDF19762.304
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000000425Ythdf19875.492ENSG00000149658YTHDF19776.000Homo_sapiens
ENSIPUG00000000425Ythdf110079.040ENSAPOG00000010796YTHDF110080.417Acanthochromis_polyacanthus
ENSIPUG00000000425Ythdf19977.778ENSAPOG00000004358ythdf19980.141Acanthochromis_polyacanthus
ENSIPUG00000000425Ythdf19875.993ENSAMEG00000017323YTHDF19777.091Ailuropoda_melanoleuca
ENSIPUG00000000425Ythdf19782.332ENSACIG00000020083YTHDF19782.940Amphilophus_citrinellus
ENSIPUG00000000425Ythdf19479.221ENSACIG00000011264ythdf19777.087Amphilophus_citrinellus
ENSIPUG00000000425Ythdf19978.219ENSAOCG00000022251ythdf19979.487Amphiprion_ocellaris
ENSIPUG00000000425Ythdf110079.200ENSAOCG00000012567YTHDF110080.096Amphiprion_ocellaris
ENSIPUG00000000425Ythdf110079.360ENSAPEG00000008750YTHDF110080.257Amphiprion_percula
ENSIPUG00000000425Ythdf19978.219ENSAPEG00000021878ythdf19979.487Amphiprion_percula
ENSIPUG00000000425Ythdf19979.227ENSATEG00000023840ythdf19980.515Anabas_testudineus
ENSIPUG00000000425Ythdf19981.655ENSATEG00000005996YTHDF19881.932Anabas_testudineus
ENSIPUG00000000425Ythdf19876.087ENSAPLG00000005985YTHDF19777.858Anas_platyrhynchos
ENSIPUG00000000425Ythdf19877.091ENSACAG00000005560YTHDF19777.495Anolis_carolinensis
ENSIPUG00000000425Ythdf19874.776ENSANAG00000034786-10075.581Aotus_nancymaae
ENSIPUG00000000425Ythdf19863.110ENSANAG00000021022-9764.469Aotus_nancymaae
ENSIPUG00000000425Ythdf110079.743ENSACLG00000025518YTHDF110080.193Astatotilapia_calliptera
ENSIPUG00000000425Ythdf19874.549ENSBTAG00000010383YTHDF110074.710Bos_taurus
ENSIPUG00000000425Ythdf19875.134ENSCJAG00000010056YTHDF19776.182Callithrix_jacchus
ENSIPUG00000000425Ythdf19175.922ENSCAFG00000012772YTHDF19976.893Canis_familiaris
ENSIPUG00000000425Ythdf19175.922ENSCAFG00020001214YTHDF19976.893Canis_lupus_dingo
ENSIPUG00000000425Ythdf19874.549ENSCHIG00000026494YTHDF110073.797Capra_hircus
ENSIPUG00000000425Ythdf19974.245ENSTSYG00000033436YTHDF19975.401Carlito_syrichta
ENSIPUG00000000425Ythdf19773.599ENSCAPG00000002544YTHDF19374.364Cavia_aperea
ENSIPUG00000000425Ythdf19875.090ENSCPOG00000010202YTHDF19775.318Cavia_porcellus
ENSIPUG00000000425Ythdf19875.681ENSCCAG00000024650YTHDF19776.364Cebus_capucinus
ENSIPUG00000000425Ythdf19875.850ENSCATG00000033272YTHDF19776.727Cercocebus_atys
ENSIPUG00000000425Ythdf19875.714ENSCLAG00000005989YTHDF110075.267Chinchilla_lanigera
ENSIPUG00000000425Ythdf19875.850ENSCSAG00000016266YTHDF19776.727Chlorocebus_sabaeus
ENSIPUG00000000425Ythdf19878.142ENSCPBG00000027183YTHDF19778.142Chrysemys_picta_bellii
ENSIPUG00000000425Ythdf19875.671ENSCANG00000029082YTHDF19776.545Colobus_angolensis_palliatus
ENSIPUG00000000425Ythdf19875.492ENSCGRG00001016568Ythdf19776.727Cricetulus_griseus_chok1gshd
ENSIPUG00000000425Ythdf19875.492ENSCGRG00000009207Ythdf19976.727Cricetulus_griseus_crigri
ENSIPUG00000000425Ythdf19481.143ENSCSEG00000020623YTHDF19583.051Cynoglossus_semilaevis
ENSIPUG00000000425Ythdf110079.549ENSCVAG00000014378YTHDF19982.971Cyprinodon_variegatus
ENSIPUG00000000425Ythdf19680.776ENSCVAG00000017940ythdf19581.648Cyprinodon_variegatus
ENSIPUG00000000425Ythdf110085.737ENSDARG00000016447ythdf110086.538Danio_rerio
ENSIPUG00000000425Ythdf19875.627ENSDNOG00000043590YTHDF19775.725Dasypus_novemcinctus
ENSIPUG00000000425Ythdf19775.045ENSDORG00000002879Ythdf19475.774Dipodomys_ordii
ENSIPUG00000000425Ythdf18158.657ENSETEG00000017860-9659.341Echinops_telfairi
ENSIPUG00000000425Ythdf19876.588ENSEASG00005023186YTHDF19776.673Equus_asinus_asinus
ENSIPUG00000000425Ythdf19874.819ENSECAG00000019475YTHDF110076.493Equus_caballus
ENSIPUG00000000425Ythdf19275.000ENSEEUG00000007461YTHDF110076.527Erinaceus_europaeus
ENSIPUG00000000425Ythdf19479.851ENSELUG00000001906YTHDF19979.664Esox_lucius
ENSIPUG00000000425Ythdf19980.511ENSELUG00000022768ythdf19983.413Esox_lucius
ENSIPUG00000000425Ythdf19875.271ENSFCAG00000008917YTHDF19776.909Felis_catus
ENSIPUG00000000425Ythdf19878.142ENSFALG00000010463YTHDF19778.142Ficedula_albicollis
ENSIPUG00000000425Ythdf19877.007ENSFDAG00000019602YTHDF19777.920Fukomys_damarensis
ENSIPUG00000000425Ythdf19681.066ENSFHEG00000023218ythdf19681.564Fundulus_heteroclitus
ENSIPUG00000000425Ythdf19782.332ENSFHEG00000002540YTHDF19982.332Fundulus_heteroclitus
ENSIPUG00000000425Ythdf19976.823ENSGMOG00000019610ythdf19978.105Gadus_morhua
ENSIPUG00000000425Ythdf19876.268ENSGALG00000005745YTHDF110077.756Gallus_gallus
ENSIPUG00000000425Ythdf110079.360ENSGAFG00000021100YTHDF110080.899Gambusia_affinis
ENSIPUG00000000425Ythdf110077.273ENSGACG00000002613YTHDF110076.375Gasterosteus_aculeatus
ENSIPUG00000000425Ythdf19978.803ENSGACG00000012014ythdf19978.120Gasterosteus_aculeatus
ENSIPUG00000000425Ythdf19877.960ENSGAGG00000003007YTHDF19777.960Gopherus_agassizii
ENSIPUG00000000425Ythdf19875.850ENSGGOG00000008340YTHDF19776.364Gorilla_gorilla
ENSIPUG00000000425Ythdf110080.225ENSHBUG00000004875YTHDF110080.676Haplochromis_burtoni
ENSIPUG00000000425Ythdf19978.491ENSHBUG00000011284ythdf19977.446Haplochromis_burtoni
ENSIPUG00000000425Ythdf19876.642ENSHGLG00000006585YTHDF19776.642Heterocephalus_glaber_female
ENSIPUG00000000425Ythdf19876.642ENSHGLG00100004683YTHDF19776.642Heterocephalus_glaber_male
ENSIPUG00000000425Ythdf110077.814ENSHCOG00000011303YTHDF110080.561Hippocampus_comes
ENSIPUG00000000425Ythdf19777.705ENSHCOG00000008866ythdf19976.238Hippocampus_comes
ENSIPUG00000000425Ythdf19876.909ENSSTOG00000023001YTHDF19877.536Ictidomys_tridecemlineatus
ENSIPUG00000000425Ythdf19876.386ENSJJAG00000013589Ythdf19977.273Jaculus_jaculus
ENSIPUG00000000425Ythdf110079.904ENSKMAG00000017472YTHDF19982.790Kryptolebias_marmoratus
ENSIPUG00000000425Ythdf19978.803ENSKMAG00000005595ythdf19978.699Kryptolebias_marmoratus
ENSIPUG00000000425Ythdf110078.060ENSLBEG00000012068YTHDF110077.849Labrus_bergylta
ENSIPUG00000000425Ythdf19977.346ENSLBEG00000014105ythdf19979.806Labrus_bergylta
ENSIPUG00000000425Ythdf19773.835ENSLACG00000014195YTHDF19676.252Latimeria_chalumnae
ENSIPUG00000000425Ythdf110076.797ENSLOCG00000005020ythdf110076.710Lepisosteus_oculatus
ENSIPUG00000000425Ythdf19877.536ENSLAFG00000008884YTHDF19776.182Loxodonta_africana
ENSIPUG00000000425Ythdf19875.850ENSMFAG00000042868YTHDF19776.727Macaca_fascicularis
ENSIPUG00000000425Ythdf19875.850ENSMMUG00000009227YTHDF19776.727Macaca_mulatta
ENSIPUG00000000425Ythdf19875.850ENSMNEG00000030851YTHDF19776.727Macaca_nemestrina
ENSIPUG00000000425Ythdf19875.850ENSMLEG00000009252YTHDF19976.727Mandrillus_leucophaeus
ENSIPUG00000000425Ythdf19978.479ENSMAMG00000024255ythdf19978.479Mastacembelus_armatus
ENSIPUG00000000425Ythdf19783.060ENSMAMG00000011072YTHDF19783.060Mastacembelus_armatus
ENSIPUG00000000425Ythdf19978.686ENSMZEG00005026397ythdf19978.675Maylandia_zebra
ENSIPUG00000000425Ythdf110080.225ENSMZEG00005023596YTHDF110080.676Maylandia_zebra
ENSIPUG00000000425Ythdf19876.268ENSMGAG00000006139YTHDF19778.040Meleagris_gallopavo
ENSIPUG00000000425Ythdf19875.313ENSMAUG00000017660Ythdf19776.545Mesocricetus_auratus
ENSIPUG00000000425Ythdf19874.955ENSMICG00000032266YTHDF19775.818Microcebus_murinus
ENSIPUG00000000425Ythdf19875.313ENSMOCG00000013573Ythdf19776.588Microtus_ochrogaster
ENSIPUG00000000425Ythdf19978.191ENSMMOG00000020467YTHDF19978.479Mola_mola
ENSIPUG00000000425Ythdf19476.768ENSMMOG00000017500ythdf19777.815Mola_mola
ENSIPUG00000000425Ythdf19176.641ENSMODG00000016842YTHDF110078.035Monodelphis_domestica
ENSIPUG00000000425Ythdf19977.655ENSMALG00000015672ythdf19978.115Monopterus_albus
ENSIPUG00000000425Ythdf110078.973ENSMALG00000022209YTHDF110078.261Monopterus_albus
ENSIPUG00000000425Ythdf19875.492MGP_CAROLIEiJ_G0024790Ythdf19776.545Mus_caroli
ENSIPUG00000000425Ythdf19875.492ENSMUSG00000038848Ythdf19776.545Mus_musculus
ENSIPUG00000000425Ythdf19875.492MGP_PahariEiJ_G0026237Ythdf19776.545Mus_pahari
ENSIPUG00000000425Ythdf19875.492MGP_SPRETEiJ_G0025715Ythdf19776.545Mus_spretus
ENSIPUG00000000425Ythdf19172.656ENSMPUG00000008111YTHDF110075.681Mustela_putorius_furo
ENSIPUG00000000425Ythdf19776.673ENSMLUG00000002241YTHDF19676.225Myotis_lucifugus
ENSIPUG00000000425Ythdf19876.744ENSNGAG00000000334Ythdf19777.636Nannospalax_galili
ENSIPUG00000000425Ythdf19781.703ENSNBRG00000015321YTHDF19980.801Neolamprologus_brichardi
ENSIPUG00000000425Ythdf19776.923ENSNBRG00000008213ythdf19879.104Neolamprologus_brichardi
ENSIPUG00000000425Ythdf19569.811ENSOPRG00000001758-9869.732Ochotona_princeps
ENSIPUG00000000425Ythdf19461.959ENSODEG00000000074-9762.230Octodon_degus
ENSIPUG00000000425Ythdf19876.087ENSODEG00000004380-9776.770Octodon_degus
ENSIPUG00000000425Ythdf19478.393ENSONIG00000016799ythdf110078.053Oreochromis_niloticus
ENSIPUG00000000425Ythdf19876.173ENSOANG00000003723YTHDF19777.132Ornithorhynchus_anatinus
ENSIPUG00000000425Ythdf110079.194ENSORLG00000009739YTHDF19982.194Oryzias_latipes
ENSIPUG00000000425Ythdf19977.258ENSORLG00000014665YTHDF19977.994Oryzias_latipes
ENSIPUG00000000425Ythdf19977.706ENSORLG00020000307ythdf19978.444Oryzias_latipes_hni
ENSIPUG00000000425Ythdf19782.117ENSORLG00020001332YTHDF19983.424Oryzias_latipes_hni
ENSIPUG00000000425Ythdf19977.544ENSORLG00015006302ythdf19978.282Oryzias_latipes_hsok
ENSIPUG00000000425Ythdf110078.871ENSORLG00015018321YTHDF19981.835Oryzias_latipes_hsok
ENSIPUG00000000425Ythdf19978.479ENSOMEG00000002941YTHDF19978.571Oryzias_melastigma
ENSIPUG00000000425Ythdf110079.126ENSOMEG00000011843YTHDF110079.073Oryzias_melastigma
ENSIPUG00000000425Ythdf19876.044ENSOGAG00000000480YTHDF19776.727Otolemur_garnettii
ENSIPUG00000000425Ythdf19875.985ENSOARG00000011639YTHDF19675.985Ovis_aries
ENSIPUG00000000425Ythdf19875.850ENSPPAG00000023277YTHDF19976.364Pan_paniscus
ENSIPUG00000000425Ythdf19875.632ENSPPRG00000020805YTHDF19776.909Panthera_pardus
ENSIPUG00000000425Ythdf17980.080ENSPTIG00000017355YTHDF19680.080Panthera_tigris_altaica
ENSIPUG00000000425Ythdf19875.850ENSPTRG00000013730YTHDF19776.364Pan_troglodytes
ENSIPUG00000000425Ythdf19875.850ENSPANG00000021472YTHDF19776.727Papio_anubis
ENSIPUG00000000425Ythdf19774.054ENSPKIG00000005427ythdf19774.549Paramormyrops_kingsleyae
ENSIPUG00000000425Ythdf19675.681ENSPKIG00000005026YTHDF19873.390Paramormyrops_kingsleyae
ENSIPUG00000000425Ythdf19675.686ENSPSIG00000005529YTHDF19476.636Pelodiscus_sinensis
ENSIPUG00000000425Ythdf19779.518ENSPMGG00000009101YTHDF19980.207Periophthalmus_magnuspinnatus
ENSIPUG00000000425Ythdf19476.344ENSPMGG00000015328ythdf19780.070Periophthalmus_magnuspinnatus
ENSIPUG00000000425Ythdf19875.313ENSPEMG00000020199Ythdf19976.588Peromyscus_maniculatus_bairdii
ENSIPUG00000000425Ythdf19675.912ENSPCIG00000017170YTHDF110077.457Phascolarctos_cinereus
ENSIPUG00000000425Ythdf19979.024ENSPFOG00000005405ythdf19978.862Poecilia_formosa
ENSIPUG00000000425Ythdf19979.024ENSPLAG00000006653ythdf19978.862Poecilia_latipinna
ENSIPUG00000000425Ythdf110079.647ENSPLAG00000006298YTHDF110080.738Poecilia_latipinna
ENSIPUG00000000425Ythdf19978.247ENSPMEG00000023753ythdf19978.734Poecilia_mexicana
ENSIPUG00000000425Ythdf110079.647ENSPMEG00000020969-10080.738Poecilia_mexicana
ENSIPUG00000000425Ythdf19978.514ENSPREG00000002173ythdf19978.833Poecilia_reticulata
ENSIPUG00000000425Ythdf19779.344ENSPREG00000017662YTHDF19879.868Poecilia_reticulata
ENSIPUG00000000425Ythdf19872.420ENSPPYG00000011226YTHDF19883.333Pongo_abelii
ENSIPUG00000000425Ythdf18973.161ENSPCAG00000002452YTHDF19872.387Procavia_capensis
ENSIPUG00000000425Ythdf19875.492ENSPCOG00000025969YTHDF19776.364Propithecus_coquereli
ENSIPUG00000000425Ythdf19671.747ENSPVAG00000017568YTHDF19573.913Pteropus_vampyrus
ENSIPUG00000000425Ythdf110080.225ENSPNYG00000002266YTHDF110080.676Pundamilia_nyererei
ENSIPUG00000000425Ythdf19978.491ENSPNYG00000014007ythdf19978.451Pundamilia_nyererei
ENSIPUG00000000425Ythdf110087.460ENSPNAG00000012447ythdf110088.424Pygocentrus_nattereri
ENSIPUG00000000425Ythdf19875.671ENSRNOG00000027015Ythdf19776.727Rattus_norvegicus
ENSIPUG00000000425Ythdf19875.492ENSRBIG00000044959YTHDF19776.364Rhinopithecus_bieti
ENSIPUG00000000425Ythdf19875.492ENSRROG00000033014YTHDF19776.364Rhinopithecus_roxellana
ENSIPUG00000000425Ythdf19774.373ENSSBOG00000027278YTHDF110074.806Saimiri_boliviensis_boliviensis
ENSIPUG00000000425Ythdf19875.676ENSSHAG00000010430YTHDF18778.119Sarcophilus_harrisii
ENSIPUG00000000425Ythdf110078.361ENSSFOG00015000284ythdf110078.049Scleropages_formosus
ENSIPUG00000000425Ythdf19289.394ENSSMAG00000007635YTHDF19878.974Scophthalmus_maximus
ENSIPUG00000000425Ythdf17593.038ENSSMAG00000013715ythdf19291.716Scophthalmus_maximus
ENSIPUG00000000425Ythdf19289.015ENSSDUG00000015823YTHDF19783.091Seriola_dumerili
ENSIPUG00000000425Ythdf19978.730ENSSDUG00000000435ythdf19979.200Seriola_dumerili
ENSIPUG00000000425Ythdf19289.015ENSSLDG00000001054YTHDF19288.571Seriola_lalandi_dorsalis
ENSIPUG00000000425Ythdf19978.503ENSSLDG00000024948ythdf19978.973Seriola_lalandi_dorsalis
ENSIPUG00000000425Ythdf19175.822ENSSPUG00000015143YTHDF110077.649Sphenodon_punctatus
ENSIPUG00000000425Ythdf19880.541ENSSPAG00000003666YTHDF110079.454Stegastes_partitus
ENSIPUG00000000425Ythdf19977.201ENSSPAG00000014989ythdf19978.447Stegastes_partitus
ENSIPUG00000000425Ythdf19875.046ENSSSCG00000040086YTHDF19775.956Sus_scrofa
ENSIPUG00000000425Ythdf19876.268ENSTGUG00000007565YTHDF19978.040Taeniopygia_guttata
ENSIPUG00000000425Ythdf19477.629ENSTRUG00000005049YTHDF19976.847Takifugu_rubripes
ENSIPUG00000000425Ythdf19778.497ENSTRUG00000004288ythdf19979.768Takifugu_rubripes
ENSIPUG00000000425Ythdf19880.519ENSTNIG00000012490ythdf19780.705Tetraodon_nigroviridis
ENSIPUG00000000425Ythdf19878.442ENSTNIG00000003975YTHDF19778.261Tetraodon_nigroviridis
ENSIPUG00000000425Ythdf19675.601ENSTTRG00000001804YTHDF19575.422Tursiops_truncatus
ENSIPUG00000000425Ythdf19775.949ENSUAMG00000011021YTHDF110076.550Ursus_americanus
ENSIPUG00000000425Ythdf19175.385ENSUMAG00000022290YTHDF110076.357Ursus_maritimus
ENSIPUG00000000425Ythdf19175.922ENSVVUG00000015275YTHDF19976.893Vulpes_vulpes
ENSIPUG00000000425Ythdf19675.092ENSXETG00000027086ythdf19475.926Xenopus_tropicalis
ENSIPUG00000000425Ythdf19778.947ENSXCOG00000008115YTHDF19980.363Xiphophorus_couchianus
ENSIPUG00000000425Ythdf19680.399ENSXCOG00000002490ythdf19380.699Xiphophorus_couchianus
ENSIPUG00000000425Ythdf19978.084ENSXMAG00000008525ythdf19979.115Xiphophorus_maculatus
ENSIPUG00000000425Ythdf19783.091ENSXMAG00000015644YTHDF19982.909Xiphophorus_maculatus

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