EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 22787 bases
Position: chr4:16374135-16396921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000629	RVT_1	PF00078.27	2.7e-07	1	1
ENSIPUP00000000629	zf-CCHC	PF00098.23	0.00054	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000676	-	2004	-	ENSIPUP00000000629	667 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000000467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000467	-	89	81.804	ENSIPUG00000023478	-	98	81.804
ENSIPUG00000000467	-	86	82.160	ENSIPUG00000009957	-	97	81.745
ENSIPUG00000000467	-	87	84.098	ENSIPUG00000020583	-	94	82.428

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000467	-	51	34.465	ENSAPOG00000012172	-	68	34.465	Acanthochromis_polyacanthus
ENSIPUG00000000467	-	80	31.520	ENSACAG00000029367	-	67	39.564	Anolis_carolinensis
ENSIPUG00000000467	-	77	47.007	ENSAMXG00000029689	-	76	46.561	Astyanax_mexicanus
ENSIPUG00000000467	-	86	44.378	ENSAMXG00000033831	-	85	43.778	Astyanax_mexicanus
ENSIPUG00000000467	-	78	44.178	ENSAMXG00000030934	-	89	44.178	Astyanax_mexicanus
ENSIPUG00000000467	-	86	42.814	ENSAMXG00000036897	-	90	42.965	Astyanax_mexicanus
ENSIPUG00000000467	-	75	44.681	ENSAMXG00000038544	-	84	44.681	Astyanax_mexicanus
ENSIPUG00000000467	-	87	45.016	ENSAMXG00000043875	-	92	44.704	Astyanax_mexicanus
ENSIPUG00000000467	-	80	38.917	ENSKMAG00000021728	-	89	38.917	Kryptolebias_marmoratus
ENSIPUG00000000467	-	78	37.913	ENSORLG00000027546	-	81	37.913	Oryzias_latipes
ENSIPUG00000000467	-	82	37.459	ENSORLG00000025074	-	88	37.459	Oryzias_latipes
ENSIPUG00000000467	-	84	35.612	ENSORLG00020008270	-	89	35.612	Oryzias_latipes_hni
ENSIPUG00000000467	-	80	36.780	ENSORLG00020018037	-	86	36.780	Oryzias_latipes_hni
ENSIPUG00000000467	-	84	36.000	ENSORLG00020019360	-	84	36.860	Oryzias_latipes_hni
ENSIPUG00000000467	-	80	40.314	ENSPKIG00000021000	-	99	40.331	Paramormyrops_kingsleyae
ENSIPUG00000000467	-	80	39.219	ENSPKIG00000000452	-	92	38.972	Paramormyrops_kingsleyae
ENSIPUG00000000467	-	81	44.351	ENSPNAG00000003267	-	99	41.106	Pygocentrus_nattereri
ENSIPUG00000000467	-	83	44.333	ENSPNAG00000014076	-	93	44.333	Pygocentrus_nattereri