EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000488 (Gene tree)
Gene ID: 108264280
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 80056 bases
Position: chr4:16734189-16814244
Accession: 108264280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000673	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000723	-	5172	XM_017465645	ENSIPUP00000000673	1723 (aa)	XP_017321134	-

Gene Model

Click here to download ENSIPUG00000000488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000488	chd2	89	59.032	ENSIPUG00000001369	chd1	92	59.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000488	chd2	99	67.668	ENSG00000173575	CHD2	87	96.939	Homo_sapiens
ENSIPUG00000000488	chd2	98	80.399	ENSAPOG00000008913	chd2	98	79.449	Acanthochromis_polyacanthus
ENSIPUG00000000488	chd2	65	74.384	ENSAMEG00000010805	-	97	74.912	Ailuropoda_melanoleuca
ENSIPUG00000000488	chd2	98	80.316	ENSAOCG00000016332	chd2	98	78.968	Amphiprion_ocellaris
ENSIPUG00000000488	chd2	98	78.972	ENSAPEG00000016676	chd2	99	77.897	Amphiprion_percula
ENSIPUG00000000488	chd2	98	78.161	ENSATEG00000005246	chd2	99	76.824	Anabas_testudineus
ENSIPUG00000000488	chd2	100	68.884	ENSAPLG00000011141	-	71	74.924	Anas_platyrhynchos
ENSIPUG00000000488	chd2	100	65.322	ENSACAG00000000088	-	72	70.557	Anolis_carolinensis
ENSIPUG00000000488	chd2	100	68.533	ENSANAG00000024017	-	97	68.810	Aotus_nancymaae
ENSIPUG00000000488	chd2	98	79.519	ENSACLG00000021370	chd2	99	78.588	Astatotilapia_calliptera
ENSIPUG00000000488	chd2	100	68.169	ENSCJAG00000020444	-	72	73.696	Callithrix_jacchus
ENSIPUG00000000488	chd2	99	67.867	ENSCAFG00000010998	CHD2	95	73.414	Canis_familiaris
ENSIPUG00000000488	chd2	100	68.279	ENSCHIG00000022261	-	72	73.333	Capra_hircus
ENSIPUG00000000488	chd2	100	68.829	ENSTSYG00000003272	-	75	74.186	Carlito_syrichta
ENSIPUG00000000488	chd2	92	73.986	ENSCPOG00000005800	-	92	75.296	Cavia_porcellus
ENSIPUG00000000488	chd2	100	68.207	ENSCCAG00000035304	-	72	74.433	Cebus_capucinus
ENSIPUG00000000488	chd2	100	68.242	ENSCATG00000031069	-	71	74.489	Cercocebus_atys
ENSIPUG00000000488	chd2	100	68.534	ENSCLAG00000016269	-	71	74.281	Chinchilla_lanigera
ENSIPUG00000000488	chd2	100	68.242	ENSCSAG00000017007	-	71	74.489	Chlorocebus_sabaeus
ENSIPUG00000000488	chd2	72	80.848	ENSCHOG00000000608	-	63	80.934	Choloepus_hoffmanni
ENSIPUG00000000488	chd2	75	86.170	ENSCPBG00000018049	-	96	85.714	Chrysemys_picta_bellii
ENSIPUG00000000488	chd2	76	53.813	ENSCSAVG00000007580	-	93	58.455	Ciona_savignyi
ENSIPUG00000000488	chd2	100	68.187	ENSCANG00000038126	-	72	74.471	Colobus_angolensis_palliatus
ENSIPUG00000000488	chd2	100	69.290	ENSCGRG00001006649	Chd2	71	74.489	Cricetulus_griseus_chok1gshd
ENSIPUG00000000488	chd2	100	69.290	ENSCGRG00000018154	Chd2	71	74.489	Cricetulus_griseus_crigri
ENSIPUG00000000488	chd2	100	70.331	ENSCSEG00000003646	chd2	99	68.880	Cynoglossus_semilaevis
ENSIPUG00000000488	chd2	98	71.278	ENSCVAG00000002427	chd2	98	70.696	Cyprinodon_variegatus
ENSIPUG00000000488	chd2	99	79.696	ENSDARG00000060687	chd2	98	81.365	Danio_rerio
ENSIPUG00000000488	chd2	100	68.771	ENSDNOG00000009796	-	71	75.076	Dasypus_novemcinctus
ENSIPUG00000000488	chd2	57	70.263	ENSEBUG00000014994	chd2	80	72.826	Eptatretus_burgeri
ENSIPUG00000000488	chd2	100	68.565	ENSEASG00005015526	-	97	78.494	Equus_asinus_asinus
ENSIPUG00000000488	chd2	72	82.803	ENSELUG00000017981	chd2	98	76.224	Esox_lucius
ENSIPUG00000000488	chd2	98	68.782	ENSFALG00000010369	-	71	75.019	Ficedula_albicollis
ENSIPUG00000000488	chd2	100	68.791	ENSFDAG00000020651	-	71	74.052	Fukomys_damarensis
ENSIPUG00000000488	chd2	91	75.062	ENSFHEG00000002119	chd2	94	75.396	Fundulus_heteroclitus
ENSIPUG00000000488	chd2	75	76.749	ENSGMOG00000002890	chd2	97	73.769	Gadus_morhua
ENSIPUG00000000488	chd2	100	68.586	ENSGALG00000006949	CHD2	71	74.829	Gallus_gallus
ENSIPUG00000000488	chd2	99	73.611	ENSGAFG00000001905	chd2	97	73.311	Gambusia_affinis
ENSIPUG00000000488	chd2	75	77.973	ENSGACG00000013246	chd2	97	74.350	Gasterosteus_aculeatus
ENSIPUG00000000488	chd2	83	77.302	ENSGAGG00000013176	-	97	86.667	Gopherus_agassizii
ENSIPUG00000000488	chd2	99	68.053	ENSGGOG00000015677	CHD2	97	68.571	Gorilla_gorilla
ENSIPUG00000000488	chd2	98	79.683	ENSHBUG00000017947	chd2	99	78.805	Haplochromis_burtoni
ENSIPUG00000000488	chd2	100	68.320	ENSHGLG00000004435	CHD2	71	74.052	Heterocephalus_glaber_female
ENSIPUG00000000488	chd2	100	67.934	ENSHGLG00100016376	-	71	73.520	Heterocephalus_glaber_male
ENSIPUG00000000488	chd2	98	72.125	ENSHCOG00000008855	chd2	98	72.043	Hippocampus_comes
ENSIPUG00000000488	chd2	100	69.146	ENSSTOG00000001270	-	71	74.355	Ictidomys_tridecemlineatus
ENSIPUG00000000488	chd2	100	68.537	ENSJJAG00000000213	Chd2	71	74.433	Jaculus_jaculus
ENSIPUG00000000488	chd2	84	78.328	ENSKMAG00000015849	chd2	69	84.251	Kryptolebias_marmoratus
ENSIPUG00000000488	chd2	73	75.273	ENSLAFG00000016885	-	98	82.230	Loxodonta_africana
ENSIPUG00000000488	chd2	99	67.723	ENSMFAG00000033343	-	71	73.926	Macaca_fascicularis
ENSIPUG00000000488	chd2	99	67.723	ENSMMUG00000011782	-	71	73.926	Macaca_mulatta
ENSIPUG00000000488	chd2	99	67.485	ENSMNEG00000036875	-	72	73.149	Macaca_nemestrina
ENSIPUG00000000488	chd2	100	68.242	ENSMLEG00000035026	-	72	74.041	Mandrillus_leucophaeus
ENSIPUG00000000488	chd2	99	78.254	ENSMAMG00000009082	chd2	99	77.183	Mastacembelus_armatus
ENSIPUG00000000488	chd2	99	79.356	ENSMZEG00005021333	chd2	99	78.588	Maylandia_zebra
ENSIPUG00000000488	chd2	100	68.548	ENSMGAG00000008966	-	72	74.772	Meleagris_gallopavo
ENSIPUG00000000488	chd2	100	68.279	ENSMICG00000000332	-	72	73.429	Microcebus_murinus
ENSIPUG00000000488	chd2	100	68.470	ENSMOCG00000015124	Chd2	71	74.099	Microtus_ochrogaster
ENSIPUG00000000488	chd2	100	69.096	ENSMODG00000013158	-	72	74.925	Monodelphis_domestica
ENSIPUG00000000488	chd2	98	78.811	ENSMALG00000007755	chd2	98	78.680	Monopterus_albus
ENSIPUG00000000488	chd2	100	69.167	MGP_CAROLIEiJ_G0029860	Chd2	72	74.431	Mus_caroli
ENSIPUG00000000488	chd2	100	68.743	ENSMUSG00000078671	Chd2	71	74.355	Mus_musculus
ENSIPUG00000000488	chd2	100	69.112	MGP_PahariEiJ_G0013082	Chd2	98	68.560	Mus_pahari
ENSIPUG00000000488	chd2	100	69.019	MGP_SPRETEiJ_G0030962	Chd2	71	74.355	Mus_spretus
ENSIPUG00000000488	chd2	100	68.774	ENSMPUG00000017577	-	71	74.186	Mustela_putorius_furo
ENSIPUG00000000488	chd2	100	68.941	ENSMLUG00000009292	-	71	74.473	Myotis_lucifugus
ENSIPUG00000000488	chd2	100	68.424	ENSNGAG00000010792	Chd2	71	74.376	Nannospalax_galili
ENSIPUG00000000488	chd2	98	77.325	ENSNBRG00000020591	chd2	74	82.018	Neolamprologus_brichardi
ENSIPUG00000000488	chd2	99	69.254	ENSNLEG00000012349	-	75	71.991	Nomascus_leucogenys
ENSIPUG00000000488	chd2	70	75.821	ENSMEUG00000001522	-	70	77.953	Notamacropus_eugenii
ENSIPUG00000000488	chd2	100	68.197	ENSODEG00000016028	-	72	74.071	Octodon_degus
ENSIPUG00000000488	chd2	98	77.314	ENSONIG00000015136	chd2	73	81.777	Oreochromis_niloticus
ENSIPUG00000000488	chd2	89	69.206	ENSOANG00000004385	-	100	67.471	Ornithorhynchus_anatinus
ENSIPUG00000000488	chd2	99	64.298	ENSOCUG00000001628	-	98	73.926	Oryctolagus_cuniculus
ENSIPUG00000000488	chd2	98	76.467	ENSORLG00000008403	chd2	79	81.136	Oryzias_latipes
ENSIPUG00000000488	chd2	98	76.800	ENSORLG00020004138	chd2	73	80.572	Oryzias_latipes_hni
ENSIPUG00000000488	chd2	99	68.480	ENSOMEG00000005831	chd2	75	75.833	Oryzias_melastigma
ENSIPUG00000000488	chd2	100	66.484	ENSOGAG00000010399	-	71	71.537	Otolemur_garnettii
ENSIPUG00000000488	chd2	100	69.435	ENSOARG00000010343	-	98	68.882	Ovis_aries
ENSIPUG00000000488	chd2	100	68.701	ENSPPAG00000030381	-	98	68.865	Pan_paniscus
ENSIPUG00000000488	chd2	99	67.668	ENSPTRG00000007478	CHD2	73	73.097	Pan_troglodytes
ENSIPUG00000000488	chd2	100	65.604	ENSPANG00000033355	-	71	70.855	Papio_anubis
ENSIPUG00000000488	chd2	98	79.859	ENSPKIG00000000495	chd2	97	79.243	Paramormyrops_kingsleyae
ENSIPUG00000000488	chd2	85	76.610	ENSPMGG00000009941	chd2	99	75.016	Periophthalmus_magnuspinnatus
ENSIPUG00000000488	chd2	100	69.527	ENSPEMG00000019507	Chd2	71	74.887	Peromyscus_maniculatus_bairdii
ENSIPUG00000000488	chd2	92	71.807	ENSPCIG00000009417	-	98	77.264	Phascolarctos_cinereus
ENSIPUG00000000488	chd2	98	75.770	ENSPFOG00000007050	chd2	98	76.480	Poecilia_formosa
ENSIPUG00000000488	chd2	98	76.055	ENSPLAG00000005067	chd2	98	76.592	Poecilia_latipinna
ENSIPUG00000000488	chd2	98	75.713	ENSPMEG00000019628	chd2	98	76.828	Poecilia_mexicana
ENSIPUG00000000488	chd2	99	66.466	ENSPPYG00000006799	-	71	72.193	Pongo_abelii
ENSIPUG00000000488	chd2	100	68.901	ENSPCOG00000028084	-	71	74.413	Propithecus_coquereli
ENSIPUG00000000488	chd2	99	79.402	ENSPNYG00000010273	chd2	99	78.690	Pundamilia_nyererei
ENSIPUG00000000488	chd2	89	86.632	ENSPNAG00000016719	chd2	99	81.870	Pygocentrus_nattereri
ENSIPUG00000000488	chd2	100	69.184	ENSRNOG00000012716	Chd2	72	74.113	Rattus_norvegicus
ENSIPUG00000000488	chd2	100	68.514	ENSRBIG00000036875	-	98	68.535	Rhinopithecus_bieti
ENSIPUG00000000488	chd2	100	68.297	ENSRROG00000041087	-	92	74.489	Rhinopithecus_roxellana
ENSIPUG00000000488	chd2	100	68.224	ENSSBOG00000023754	-	73	73.732	Saimiri_boliviensis_boliviensis
ENSIPUG00000000488	chd2	100	69.534	ENSSHAG00000012513	-	72	75.075	Sarcophilus_harrisii
ENSIPUG00000000488	chd2	100	79.621	ENSSFOG00015023759	chd2	98	79.278	Scleropages_formosus
ENSIPUG00000000488	chd2	98	78.023	ENSSMAG00000001726	chd2	99	76.735	Scophthalmus_maximus
ENSIPUG00000000488	chd2	98	77.228	ENSSLDG00000001146	chd2	74	81.383	Seriola_lalandi_dorsalis
ENSIPUG00000000488	chd2	77	80.000	ENSSARG00000014112	-	77	80.000	Sorex_araneus
ENSIPUG00000000488	chd2	100	67.283	ENSSPUG00000011266	-	72	74.292	Sphenodon_punctatus
ENSIPUG00000000488	chd2	98	78.191	ENSSPAG00000016452	chd2	99	77.224	Stegastes_partitus
ENSIPUG00000000488	chd2	100	69.287	ENSSSCG00000002266	-	98	69.460	Sus_scrofa
ENSIPUG00000000488	chd2	98	69.001	ENSTGUG00000008540	-	71	75.591	Taeniopygia_guttata
ENSIPUG00000000488	chd2	85	74.211	ENSTRUG00000008842	chd2	85	73.320	Takifugu_rubripes
ENSIPUG00000000488	chd2	89	78.770	ENSTNIG00000010760	chd2	98	78.337	Tetraodon_nigroviridis
ENSIPUG00000000488	chd2	71	70.053	ENSTBEG00000017730	-	74	70.053	Tupaia_belangeri
ENSIPUG00000000488	chd2	91	71.410	ENSTTRG00000000430	-	74	75.596	Tursiops_truncatus
ENSIPUG00000000488	chd2	100	69.490	ENSUMAG00000000083	-	98	69.261	Ursus_maritimus
ENSIPUG00000000488	chd2	87	70.015	ENSVPAG00000009645	-	60	87.523	Vicugna_pacos
ENSIPUG00000000488	chd2	91	64.836	ENSXETG00000024129	chd2	91	76.797	Xenopus_tropicalis
ENSIPUG00000000488	chd2	98	72.842	ENSXCOG00000020255	chd2	99	73.209	Xiphophorus_couchianus
ENSIPUG00000000488	chd2	99	77.465	ENSXMAG00000002707	chd2	98	76.590	Xiphophorus_maculatus