EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000529 (Gene tree)
Gene ID: 108264005
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 27072 bases
Position: chr4:17020598-17047669
Accession: 108264005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000729	HRDC	PF00570.23	7.5e-13	1	1
ENSIPUP00000000729	BDHCT	PF08072.11	1.5e-17	1	1
ENSIPUP00000000729	DEAD	PF00270.29	6.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000783	-	3399	XM_017465286	ENSIPUP00000000729	1132 (aa)	XP_017320775	-

Gene Model

Click here to download ENSIPUG00000000529's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03440	Homologous recombination	KEGG
ipu03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000529	blm	50	37.919	ENSIPUG00000024092	recql	87	34.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000529	blm	85	54.468	ENSG00000197299	BLM	74	55.238	Homo_sapiens
ENSIPUG00000000529	blm	86	60.857	ENSAPOG00000017966	blm	78	63.289	Acanthochromis_polyacanthus
ENSIPUG00000000529	blm	68	64.885	ENSAMEG00000013843	BLM	74	54.606	Ailuropoda_melanoleuca
ENSIPUG00000000529	blm	89	61.815	ENSACIG00000023762	blm	76	62.665	Amphilophus_citrinellus
ENSIPUG00000000529	blm	77	70.651	ENSAOCG00000003318	blm	77	62.938	Amphiprion_ocellaris
ENSIPUG00000000529	blm	76	70.366	ENSAPEG00000018105	blm	75	62.749	Amphiprion_percula
ENSIPUG00000000529	blm	80	72.361	ENSATEG00000006421	blm	77	63.281	Anabas_testudineus
ENSIPUG00000000529	blm	94	50.297	ENSAPLG00000006878	BLM	97	50.128	Anas_platyrhynchos
ENSIPUG00000000529	blm	71	65.245	ENSACAG00000014275	BLM	61	60.321	Anolis_carolinensis
ENSIPUG00000000529	blm	85	54.805	ENSANAG00000038415	BLM	74	55.619	Aotus_nancymaae
ENSIPUG00000000529	blm	82	68.688	ENSACLG00000020354	blm	75	63.012	Astatotilapia_calliptera
ENSIPUG00000000529	blm	98	72.718	ENSAMXG00000016970	blm	83	74.082	Astyanax_mexicanus
ENSIPUG00000000529	blm	59	76.786	ENSBTAG00000020301	BLM	57	69.032	Bos_taurus
ENSIPUG00000000529	blm	57	40.757	WBGene00001865	him-6	75	38.592	Caenorhabditis_elegans
ENSIPUG00000000529	blm	68	65.306	ENSCJAG00000009803	BLM	74	55.661	Callithrix_jacchus
ENSIPUG00000000529	blm	68	63.822	ENSCAFG00000012385	BLM	77	51.971	Canis_familiaris
ENSIPUG00000000529	blm	68	63.822	ENSCAFG00020016111	BLM	90	65.200	Canis_lupus_dingo
ENSIPUG00000000529	blm	59	76.786	ENSCHIG00000010329	BLM	79	52.065	Capra_hircus
ENSIPUG00000000529	blm	68	65.649	ENSTSYG00000012368	BLM	74	55.143	Carlito_syrichta
ENSIPUG00000000529	blm	62	71.971	ENSCAPG00000017976	BLM	73	58.778	Cavia_aperea
ENSIPUG00000000529	blm	85	54.962	ENSCPOG00000001761	BLM	74	54.962	Cavia_porcellus
ENSIPUG00000000529	blm	68	66.327	ENSCCAG00000023069	BLM	74	55.661	Cebus_capucinus
ENSIPUG00000000529	blm	68	65.732	ENSCATG00000040609	BLM	76	77.597	Cercocebus_atys
ENSIPUG00000000529	blm	68	65.732	ENSCLAG00000012111	BLM	74	55.492	Chinchilla_lanigera
ENSIPUG00000000529	blm	68	65.987	ENSCSAG00000017040	BLM	73	55.333	Chlorocebus_sabaeus
ENSIPUG00000000529	blm	60	62.100	ENSCHOG00000006255	BLM	69	53.040	Choloepus_hoffmanni
ENSIPUG00000000529	blm	83	58.804	ENSCPBG00000025000	BLM	93	55.621	Chrysemys_picta_bellii
ENSIPUG00000000529	blm	68	66.108	ENSCGRG00001024897	Blm	75	53.947	Cricetulus_griseus_chok1gshd
ENSIPUG00000000529	blm	83	69.487	ENSCSEG00000013483	blm	83	60.367	Cynoglossus_semilaevis
ENSIPUG00000000529	blm	51	73.993	ENSCVAG00000017583	blm	82	63.905	Cyprinodon_variegatus
ENSIPUG00000000529	blm	86	72.629	ENSDARG00000077089	blm	70	73.276	Danio_rerio
ENSIPUG00000000529	blm	68	64.331	ENSDNOG00000010159	BLM	74	53.645	Dasypus_novemcinctus
ENSIPUG00000000529	blm	67	65.693	ENSDORG00000011033	Blm	99	55.333	Dipodomys_ordii
ENSIPUG00000000529	blm	58	43.694	FBgn0002906	Blm	52	40.506	Drosophila_melanogaster
ENSIPUG00000000529	blm	57	49.603	ENSETEG00000015019	BLM	66	41.667	Echinops_telfairi
ENSIPUG00000000529	blm	52	57.336	ENSEBUG00000015743	-	97	50.786	Eptatretus_burgeri
ENSIPUG00000000529	blm	85	51.734	ENSEASG00005006727	BLM	74	52.027	Equus_asinus_asinus
ENSIPUG00000000529	blm	71	62.278	ENSECAG00000011405	BLM	74	54.202	Equus_caballus
ENSIPUG00000000529	blm	68	63.057	ENSEEUG00000001434	BLM	75	53.238	Erinaceus_europaeus
ENSIPUG00000000529	blm	77	73.436	ENSELUG00000019098	blm	60	75.845	Esox_lucius
ENSIPUG00000000529	blm	69	63.217	ENSFCAG00000006087	BLM	74	54.123	Felis_catus
ENSIPUG00000000529	blm	73	60.635	ENSFALG00000010981	BLM	68	60.752	Ficedula_albicollis
ENSIPUG00000000529	blm	60	75.740	ENSFDAG00000012658	BLM	71	59.013	Fukomys_damarensis
ENSIPUG00000000529	blm	77	70.694	ENSFHEG00000002553	blm	75	63.188	Fundulus_heteroclitus
ENSIPUG00000000529	blm	87	68.009	ENSGMOG00000016431	blm	99	65.242	Gadus_morhua
ENSIPUG00000000529	blm	73	64.865	ENSGALG00000008256	BLM	66	60.578	Gallus_gallus
ENSIPUG00000000529	blm	76	71.429	ENSGAFG00000001117	blm	79	62.888	Gambusia_affinis
ENSIPUG00000000529	blm	86	67.360	ENSGACG00000010863	blm	100	81.818	Gasterosteus_aculeatus
ENSIPUG00000000529	blm	70	65.014	ENSGAGG00000005383	BLM	84	65.014	Gopherus_agassizii
ENSIPUG00000000529	blm	85	54.424	ENSGGOG00000007710	BLM	77	76.774	Gorilla_gorilla
ENSIPUG00000000529	blm	83	68.578	ENSHBUG00000015943	blm	75	63.324	Haplochromis_burtoni
ENSIPUG00000000529	blm	71	62.620	ENSHGLG00000013231	BLM	73	55.225	Heterocephalus_glaber_female
ENSIPUG00000000529	blm	85	62.791	ENSHCOG00000011455	blm	100	62.993	Hippocampus_comes
ENSIPUG00000000529	blm	68	64.586	ENSSTOG00000005000	BLM	73	53.920	Ictidomys_tridecemlineatus
ENSIPUG00000000529	blm	68	59.311	ENSJJAG00000016322	Blm	99	50.287	Jaculus_jaculus
ENSIPUG00000000529	blm	86	63.158	ENSKMAG00000016608	blm	75	63.828	Kryptolebias_marmoratus
ENSIPUG00000000529	blm	60	77.219	ENSLBEG00000018729	blm	84	74.756	Labrus_bergylta
ENSIPUG00000000529	blm	71	67.893	ENSLACG00000006490	BLM	63	63.348	Latimeria_chalumnae
ENSIPUG00000000529	blm	76	67.213	ENSLOCG00000014302	blm	69	66.515	Lepisosteus_oculatus
ENSIPUG00000000529	blm	68	65.860	ENSMFAG00000042982	BLM	76	77.597	Macaca_fascicularis
ENSIPUG00000000529	blm	68	65.860	ENSMMUG00000019526	BLM	76	77.597	Macaca_mulatta
ENSIPUG00000000529	blm	68	65.732	ENSMNEG00000031251	BLM	76	77.273	Macaca_nemestrina
ENSIPUG00000000529	blm	67	61.735	ENSMLEG00000032934	BLM	78	49.955	Mandrillus_leucophaeus
ENSIPUG00000000529	blm	86	62.188	ENSMAMG00000008726	blm	76	63.767	Mastacembelus_armatus
ENSIPUG00000000529	blm	86	62.945	ENSMZEG00005022323	blm	75	63.532	Maylandia_zebra
ENSIPUG00000000529	blm	51	61.017	ENSMGAG00000010473	BLM	99	61.017	Meleagris_gallopavo
ENSIPUG00000000529	blm	68	65.561	ENSMAUG00000008953	Blm	74	55.005	Mesocricetus_auratus
ENSIPUG00000000529	blm	68	66.324	ENSMOCG00000016367	Blm	75	55.146	Microtus_ochrogaster
ENSIPUG00000000529	blm	80	71.834	ENSMMOG00000006959	blm	76	63.263	Mola_mola
ENSIPUG00000000529	blm	67	64.413	ENSMODG00000019449	BLM	59	60.714	Monodelphis_domestica
ENSIPUG00000000529	blm	72	71.767	ENSMALG00000007323	blm	76	63.862	Monopterus_albus
ENSIPUG00000000529	blm	68	66.067	MGP_CAROLIEiJ_G0029907	Blm	74	55.429	Mus_caroli
ENSIPUG00000000529	blm	68	66.067	ENSMUSG00000030528	Blm	74	54.820	Mus_musculus
ENSIPUG00000000529	blm	68	65.513	MGP_PahariEiJ_G0013129	Blm	74	54.798	Mus_pahari
ENSIPUG00000000529	blm	68	65.982	MGP_SPRETEiJ_G0031009	Blm	74	54.820	Mus_spretus
ENSIPUG00000000529	blm	50	70.228	ENSMPUG00000015657	BLM	52	65.517	Mustela_putorius_furo
ENSIPUG00000000529	blm	68	64.512	ENSMLUG00000014697	BLM	74	54.044	Myotis_lucifugus
ENSIPUG00000000529	blm	68	65.548	ENSNGAG00000001275	Blm	74	54.475	Nannospalax_galili
ENSIPUG00000000529	blm	76	71.961	ENSNBRG00000019702	blm	75	63.776	Neolamprologus_brichardi
ENSIPUG00000000529	blm	85	52.281	ENSNLEG00000012087	BLM	99	51.718	Nomascus_leucogenys
ENSIPUG00000000529	blm	65	60.800	ENSMEUG00000007253	BLM	78	48.313	Notamacropus_eugenii
ENSIPUG00000000529	blm	62	66.061	ENSOPRG00000011667	BLM	51	66.061	Ochotona_princeps
ENSIPUG00000000529	blm	68	60.255	ENSODEG00000015373	BLM	99	51.538	Octodon_degus
ENSIPUG00000000529	blm	82	66.775	ENSONIG00000015193	blm	73	61.823	Oreochromis_niloticus
ENSIPUG00000000529	blm	66	65.544	ENSOANG00000009316	-	99	65.544	Ornithorhynchus_anatinus
ENSIPUG00000000529	blm	68	64.549	ENSOCUG00000013969	BLM	75	52.714	Oryctolagus_cuniculus
ENSIPUG00000000529	blm	86	65.138	ENSORLG00000008110	blm	76	65.616	Oryzias_latipes
ENSIPUG00000000529	blm	86	65.138	ENSORLG00020004812	blm	76	65.616	Oryzias_latipes_hni
ENSIPUG00000000529	blm	86	64.976	ENSORLG00015018640	blm	99	66.002	Oryzias_latipes_hsok
ENSIPUG00000000529	blm	80	72.598	ENSOMEG00000023545	blm	75	64.689	Oryzias_melastigma
ENSIPUG00000000529	blm	67	64.623	ENSOGAG00000005708	BLM	61	60.784	Otolemur_garnettii
ENSIPUG00000000529	blm	68	64.403	ENSOARG00000012875	BLM	60	61.290	Ovis_aries
ENSIPUG00000000529	blm	68	65.732	ENSPPAG00000032173	BLM	74	55.143	Pan_paniscus
ENSIPUG00000000529	blm	68	64.076	ENSPPRG00000002471	BLM	74	53.429	Panthera_pardus
ENSIPUG00000000529	blm	68	63.694	ENSPTIG00000016168	BLM	74	53.042	Panthera_tigris_altaica
ENSIPUG00000000529	blm	68	65.223	ENSPTRG00000007460	BLM	81	51.337	Pan_troglodytes
ENSIPUG00000000529	blm	68	65.860	ENSPANG00000018572	BLM	76	77.597	Papio_anubis
ENSIPUG00000000529	blm	76	72.899	ENSPKIG00000008954	blm	66	70.764	Paramormyrops_kingsleyae
ENSIPUG00000000529	blm	66	73.517	ENSPMGG00000006629	blm	100	63.158	Periophthalmus_magnuspinnatus
ENSIPUG00000000529	blm	68	65.473	ENSPEMG00000017348	Blm	74	54.876	Peromyscus_maniculatus_bairdii
ENSIPUG00000000529	blm	57	61.444	ENSPMAG00000000445	blm	99	56.393	Petromyzon_marinus
ENSIPUG00000000529	blm	67	64.396	ENSPCIG00000006609	BLM	60	60.068	Phascolarctos_cinereus
ENSIPUG00000000529	blm	86	61.605	ENSPFOG00000005059	blm	75	63.521	Poecilia_formosa
ENSIPUG00000000529	blm	86	61.605	ENSPLAG00000017344	blm	75	63.398	Poecilia_latipinna
ENSIPUG00000000529	blm	86	61.799	ENSPMEG00000000321	blm	75	63.716	Poecilia_mexicana
ENSIPUG00000000529	blm	86	61.808	ENSPREG00000007715	blm	75	63.168	Poecilia_reticulata
ENSIPUG00000000529	blm	68	64.331	ENSPPYG00000006784	BLM	61	60.575	Pongo_abelii
ENSIPUG00000000529	blm	67	62.197	ENSPCAG00000008960	BLM	61	58.796	Procavia_capensis
ENSIPUG00000000529	blm	85	47.020	ENSPCOG00000000439	BLM	72	47.469	Propithecus_coquereli
ENSIPUG00000000529	blm	73	75.817	ENSPVAG00000011642	BLM	51	75.817	Pteropus_vampyrus
ENSIPUG00000000529	blm	86	54.119	ENSPNYG00000010956	blm	73	54.928	Pundamilia_nyererei
ENSIPUG00000000529	blm	99	77.223	ENSPNAG00000011714	blm	82	77.887	Pygocentrus_nattereri
ENSIPUG00000000529	blm	68	65.557	ENSRNOG00000011213	Blm	74	54.685	Rattus_norvegicus
ENSIPUG00000000529	blm	68	65.605	ENSRBIG00000029656	BLM	77	77.097	Rhinopithecus_bieti
ENSIPUG00000000529	blm	68	65.605	ENSRROG00000037871	BLM	77	77.097	Rhinopithecus_roxellana
ENSIPUG00000000529	blm	56	74.691	ENSSBOG00000030957	BLM	71	56.400	Saimiri_boliviensis_boliviensis
ENSIPUG00000000529	blm	67	64.267	ENSSHAG00000007988	BLM	75	53.214	Sarcophilus_harrisii
ENSIPUG00000000529	blm	87	66.634	ENSSFOG00015015462	blm	95	59.464	Scleropages_formosus
ENSIPUG00000000529	blm	79	70.225	ENSSMAG00000001120	blm	79	61.116	Scophthalmus_maximus
ENSIPUG00000000529	blm	76	71.801	ENSSDUG00000010955	blm	76	68.818	Seriola_dumerili
ENSIPUG00000000529	blm	86	61.090	ENSSLDG00000000634	blm	65	68.490	Seriola_lalandi_dorsalis
ENSIPUG00000000529	blm	68	59.795	ENSSARG00000006398	BLM	79	50.712	Sorex_araneus
ENSIPUG00000000529	blm	86	53.104	ENSSPUG00000000013	BLM	93	53.743	Sphenodon_punctatus
ENSIPUG00000000529	blm	76	72.129	ENSSPAG00000013999	blm	74	63.767	Stegastes_partitus
ENSIPUG00000000529	blm	68	64.923	ENSSSCG00000001816	BLM	58	64.250	Sus_scrofa
ENSIPUG00000000529	blm	68	57.560	ENSTGUG00000009959	-	76	53.908	Taeniopygia_guttata
ENSIPUG00000000529	blm	86	61.223	ENSTRUG00000019860	blm	76	61.737	Takifugu_rubripes
ENSIPUG00000000529	blm	77	70.167	ENSTNIG00000019246	blm	76	62.042	Tetraodon_nigroviridis
ENSIPUG00000000529	blm	68	64.586	ENSTTRG00000016386	BLM	74	54.433	Tursiops_truncatus
ENSIPUG00000000529	blm	81	56.450	ENSUMAG00000009105	BLM	95	68.715	Ursus_maritimus
ENSIPUG00000000529	blm	68	61.529	ENSVPAG00000000085	BLM	79	49.418	Vicugna_pacos
ENSIPUG00000000529	blm	59	76.702	ENSVVUG00000006402	BLM	77	52.337	Vulpes_vulpes
ENSIPUG00000000529	blm	74	62.053	ENSXETG00000007847	blm	60	62.053	Xenopus_tropicalis
ENSIPUG00000000529	blm	73	67.831	ENSXCOG00000020227	blm	73	60.331	Xiphophorus_couchianus
ENSIPUG00000000529	blm	73	70.560	ENSXMAG00000002951	blm	75	62.755	Xiphophorus_maculatus