EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000537 (Gene tree)
Gene ID: 108271013
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: protein strawberry notch homolog 2-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 64727 bases
Position: chr10:16558083-16622809
Accession: 108271013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000763	ResIII	PF04851.15	1.6e-07	1	1
ENSIPUP00000000754	ResIII	PF04851.15	1.7e-07	1	1
ENSIPUP00000000734	ResIII	PF04851.15	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000818	-	4437	XM_017478161	ENSIPUP00000000763	1340 (aa)	XP_017333650	A0A2D0RU01
ENSIPUT00000000809	-	4758	-	ENSIPUP00000000754	1382 (aa)	-	-
ENSIPUT00000000789	-	4842	XM_017478160	ENSIPUP00000000734	1410 (aa)	XP_017333649	A0A2D0RT19

Gene Model

Click here to download ENSIPUG00000000537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000537	si:ch73-63e15.2	85	77.408	ENSIPUG00000019672	sbno2	99	74.658
ENSIPUG00000000537	si:ch73-63e15.2	70	65.760	ENSIPUG00000015830	Sbno1	68	65.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000537	si:ch73-63e15.2	84	68.326	ENSG00000064932	SBNO2	87	69.520	Homo_sapiens
ENSIPUG00000000537	si:ch73-63e15.2	86	79.966	ENSAPOG00000003185	si:ch73-63e15.2	90	78.299	Acanthochromis_polyacanthus
ENSIPUG00000000537	si:ch73-63e15.2	86	80.558	ENSAOCG00000016581	si:ch73-63e15.2	93	81.230	Amphiprion_ocellaris
ENSIPUG00000000537	si:ch73-63e15.2	86	80.642	ENSAPEG00000008862	si:ch73-63e15.2	77	81.558	Amphiprion_percula
ENSIPUG00000000537	si:ch73-63e15.2	96	73.956	ENSATEG00000023838	si:ch73-63e15.2	99	77.976	Anabas_testudineus
ENSIPUG00000000537	si:ch73-63e15.2	84	70.396	ENSAPLG00000007158	SBNO2	90	69.767	Anas_platyrhynchos
ENSIPUG00000000537	si:ch73-63e15.2	83	69.070	ENSANAG00000026685	SBNO2	92	66.667	Aotus_nancymaae
ENSIPUG00000000537	si:ch73-63e15.2	92	75.968	ENSACLG00000005090	si:ch73-63e15.2	80	76.410	Astatotilapia_calliptera
ENSIPUG00000000537	si:ch73-63e15.2	99	78.726	ENSAMXG00000015881	si:ch73-63e15.2	99	79.102	Astyanax_mexicanus
ENSIPUG00000000537	si:ch73-63e15.2	88	74.646	ENSAMXG00000018868	sbno2a	96	77.732	Astyanax_mexicanus
ENSIPUG00000000537	si:ch73-63e15.2	83	69.634	ENSBTAG00000020780	SBNO2	87	69.546	Bos_taurus
ENSIPUG00000000537	si:ch73-63e15.2	83	69.599	ENSCAFG00000019543	SBNO2	87	67.635	Canis_familiaris
ENSIPUG00000000537	si:ch73-63e15.2	83	69.599	ENSCAFG00020017115	SBNO2	92	67.635	Canis_lupus_dingo
ENSIPUG00000000537	si:ch73-63e15.2	83	69.660	ENSCHIG00000026127	SBNO2	90	65.998	Capra_hircus
ENSIPUG00000000537	si:ch73-63e15.2	83	67.860	ENSCAPG00000005731	SBNO2	98	65.557	Cavia_aperea
ENSIPUG00000000537	si:ch73-63e15.2	83	67.650	ENSCPOG00000007477	SBNO2	90	65.486	Cavia_porcellus
ENSIPUG00000000537	si:ch73-63e15.2	84	68.690	ENSCCAG00000037518	SBNO2	89	68.426	Cebus_capucinus
ENSIPUG00000000537	si:ch73-63e15.2	85	68.345	ENSCATG00000037046	SBNO2	87	69.565	Cercocebus_atys
ENSIPUG00000000537	si:ch73-63e15.2	83	69.500	ENSCLAG00000010178	SBNO2	98	69.588	Chinchilla_lanigera
ENSIPUG00000000537	si:ch73-63e15.2	85	68.259	ENSCSAG00000012317	SBNO2	88	66.886	Chlorocebus_sabaeus
ENSIPUG00000000537	si:ch73-63e15.2	90	66.074	ENSCPBG00000008920	SBNO2	90	72.340	Chrysemys_picta_bellii
ENSIPUG00000000537	si:ch73-63e15.2	80	68.068	ENSCANG00000036745	SBNO2	94	69.280	Colobus_angolensis_palliatus
ENSIPUG00000000537	si:ch73-63e15.2	83	67.190	ENSCGRG00001023960	Sbno2	89	65.378	Cricetulus_griseus_chok1gshd
ENSIPUG00000000537	si:ch73-63e15.2	83	68.352	ENSCGRG00000011984	Sbno2	89	66.475	Cricetulus_griseus_crigri
ENSIPUG00000000537	si:ch73-63e15.2	84	77.178	ENSCSEG00000006856	si:ch73-63e15.2	92	81.503	Cynoglossus_semilaevis
ENSIPUG00000000537	si:ch73-63e15.2	85	80.155	ENSCVAG00000005663	si:ch73-63e15.2	78	80.155	Cyprinodon_variegatus
ENSIPUG00000000537	si:ch73-63e15.2	99	72.198	ENSDARG00000016188	SBNO2	82	82.193	Danio_rerio
ENSIPUG00000000537	si:ch73-63e15.2	86	75.595	ENSDARG00000098801	sbno2a	91	72.887	Danio_rerio
ENSIPUG00000000537	si:ch73-63e15.2	84	68.498	ENSDORG00000002916	Sbno2	91	66.023	Dipodomys_ordii
ENSIPUG00000000537	si:ch73-63e15.2	83	69.599	ENSEASG00005021621	SBNO2	88	69.520	Equus_asinus_asinus
ENSIPUG00000000537	si:ch73-63e15.2	83	68.990	ENSECAG00000011827	SBNO2	88	69.432	Equus_caballus
ENSIPUG00000000537	si:ch73-63e15.2	87	81.229	ENSELUG00000020457	si:ch73-63e15.2	82	80.801	Esox_lucius
ENSIPUG00000000537	si:ch73-63e15.2	86	68.714	ENSFALG00000013988	SBNO2	94	65.145	Ficedula_albicollis
ENSIPUG00000000537	si:ch73-63e15.2	81	67.582	ENSFDAG00000015186	SBNO2	88	66.438	Fukomys_damarensis
ENSIPUG00000000537	si:ch73-63e15.2	93	74.804	ENSFHEG00000022262	si:ch73-63e15.2	78	78.898	Fundulus_heteroclitus
ENSIPUG00000000537	si:ch73-63e15.2	83	81.012	ENSGMOG00000007542	si:ch73-63e15.2	96	80.509	Gadus_morhua
ENSIPUG00000000537	si:ch73-63e15.2	98	63.830	ENSGALG00000037522	SBNO2	84	70.765	Gallus_gallus
ENSIPUG00000000537	si:ch73-63e15.2	85	80.259	ENSGAFG00000004860	si:ch73-63e15.2	90	81.217	Gambusia_affinis
ENSIPUG00000000537	si:ch73-63e15.2	83	80.522	ENSGACG00000013190	si:ch73-63e15.2	95	80.522	Gasterosteus_aculeatus
ENSIPUG00000000537	si:ch73-63e15.2	98	63.887	ENSGAGG00000008348	SBNO2	89	69.288	Gopherus_agassizii
ENSIPUG00000000537	si:ch73-63e15.2	92	76.187	ENSHBUG00000010742	si:ch73-63e15.2	78	80.086	Haplochromis_burtoni
ENSIPUG00000000537	si:ch73-63e15.2	84	68.653	ENSHGLG00000008739	SBNO2	89	66.859	Heterocephalus_glaber_female
ENSIPUG00000000537	si:ch73-63e15.2	83	69.170	ENSHGLG00100005269	SBNO2	98	69.258	Heterocephalus_glaber_male
ENSIPUG00000000537	si:ch73-63e15.2	85	78.833	ENSHCOG00000000884	si:ch73-63e15.2	92	76.340	Hippocampus_comes
ENSIPUG00000000537	si:ch73-63e15.2	83	68.783	ENSSTOG00000025832	SBNO2	94	64.615	Ictidomys_tridecemlineatus
ENSIPUG00000000537	si:ch73-63e15.2	84	66.667	ENSJJAG00000017397	Sbno2	94	62.238	Jaculus_jaculus
ENSIPUG00000000537	si:ch73-63e15.2	87	78.469	ENSKMAG00000005541	si:ch73-63e15.2	80	78.469	Kryptolebias_marmoratus
ENSIPUG00000000537	si:ch73-63e15.2	95	73.135	ENSLBEG00000025016	si:ch73-63e15.2	97	81.124	Labrus_bergylta
ENSIPUG00000000537	si:ch73-63e15.2	85	81.739	ENSLOCG00000004643	si:ch73-63e15.2	85	81.739	Lepisosteus_oculatus
ENSIPUG00000000537	si:ch73-63e15.2	84	64.726	ENSLAFG00000008824	SBNO2	89	66.254	Loxodonta_africana
ENSIPUG00000000537	si:ch73-63e15.2	85	66.781	ENSMFAG00000040030	SBNO2	93	65.781	Macaca_fascicularis
ENSIPUG00000000537	si:ch73-63e15.2	85	68.345	ENSMMUG00000010886	SBNO2	88	67.910	Macaca_mulatta
ENSIPUG00000000537	si:ch73-63e15.2	85	68.259	ENSMNEG00000039927	SBNO2	92	66.942	Macaca_nemestrina
ENSIPUG00000000537	si:ch73-63e15.2	78	68.988	ENSMLEG00000038556	SBNO2	95	67.469	Mandrillus_leucophaeus
ENSIPUG00000000537	si:ch73-63e15.2	97	73.289	ENSMAMG00000018758	si:ch73-63e15.2	75	80.866	Mastacembelus_armatus
ENSIPUG00000000537	si:ch73-63e15.2	97	73.736	ENSMZEG00005010682	si:ch73-63e15.2	80	76.550	Maylandia_zebra
ENSIPUG00000000537	si:ch73-63e15.2	83	70.563	ENSMGAG00000003801	SBNO2	89	70.563	Meleagris_gallopavo
ENSIPUG00000000537	si:ch73-63e15.2	84	68.480	ENSMAUG00000008034	Sbno2	89	66.941	Mesocricetus_auratus
ENSIPUG00000000537	si:ch73-63e15.2	85	68.515	ENSMICG00000013071	SBNO2	87	69.615	Microcebus_murinus
ENSIPUG00000000537	si:ch73-63e15.2	84	68.594	ENSMOCG00000010504	Sbno2	89	66.804	Microtus_ochrogaster
ENSIPUG00000000537	si:ch73-63e15.2	87	68.121	ENSMODG00000005382	SBNO2	90	65.427	Monodelphis_domestica
ENSIPUG00000000537	si:ch73-63e15.2	70	74.372	ENSMALG00000021831	si:ch73-63e15.2	98	76.262	Monopterus_albus
ENSIPUG00000000537	si:ch73-63e15.2	84	68.221	ENSMUSG00000035673	Sbno2	98	66.612	Mus_musculus
ENSIPUG00000000537	si:ch73-63e15.2	84	68.048	MGP_PahariEiJ_G0030976	Sbno2	89	66.530	Mus_pahari
ENSIPUG00000000537	si:ch73-63e15.2	84	68.394	MGP_SPRETEiJ_G0016381	Sbno2	95	66.776	Mus_spretus
ENSIPUG00000000537	si:ch73-63e15.2	71	71.226	ENSMPUG00000008747	SBNO2	96	68.381	Mustela_putorius_furo
ENSIPUG00000000537	si:ch73-63e15.2	84	67.990	ENSNGAG00000004308	Sbno2	93	65.000	Nannospalax_galili
ENSIPUG00000000537	si:ch73-63e15.2	80	80.365	ENSNBRG00000022968	si:ch73-63e15.2	96	82.778	Neolamprologus_brichardi
ENSIPUG00000000537	si:ch73-63e15.2	82	67.788	ENSNLEG00000001305	SBNO2	90	68.224	Nomascus_leucogenys
ENSIPUG00000000537	si:ch73-63e15.2	69	65.499	ENSMEUG00000013511	-	77	65.499	Notamacropus_eugenii
ENSIPUG00000000537	si:ch73-63e15.2	81	69.439	ENSOPRG00000017238	SBNO2	93	68.871	Ochotona_princeps
ENSIPUG00000000537	si:ch73-63e15.2	84	67.410	ENSODEG00000011822	SBNO2	90	65.980	Octodon_degus
ENSIPUG00000000537	si:ch73-63e15.2	91	77.115	ENSONIG00000002490	si:ch73-63e15.2	96	78.453	Oreochromis_niloticus
ENSIPUG00000000537	si:ch73-63e15.2	96	72.893	ENSORLG00000000913	si:ch73-63e15.2	77	81.261	Oryzias_latipes
ENSIPUG00000000537	si:ch73-63e15.2	96	72.817	ENSORLG00020010978	si:ch73-63e15.2	78	79.503	Oryzias_latipes_hni
ENSIPUG00000000537	si:ch73-63e15.2	84	79.913	ENSORLG00015000202	si:ch73-63e15.2	77	81.261	Oryzias_latipes_hsok
ENSIPUG00000000537	si:ch73-63e15.2	85	79.452	ENSOMEG00000000359	si:ch73-63e15.2	79	77.860	Oryzias_melastigma
ENSIPUG00000000537	si:ch73-63e15.2	84	65.979	ENSOARG00000011130	SBNO2	93	63.200	Ovis_aries
ENSIPUG00000000537	si:ch73-63e15.2	85	67.288	ENSPPAG00000032482	SBNO2	89	68.448	Pan_paniscus
ENSIPUG00000000537	si:ch73-63e15.2	85	68.205	ENSPTRG00000010185	SBNO2	88	69.291	Pan_troglodytes
ENSIPUG00000000537	si:ch73-63e15.2	85	65.017	ENSPANG00000009658	SBNO2	87	66.174	Papio_anubis
ENSIPUG00000000537	si:ch73-63e15.2	86	70.769	ENSPKIG00000009707	-	86	78.122	Paramormyrops_kingsleyae
ENSIPUG00000000537	si:ch73-63e15.2	99	70.389	ENSPKIG00000024201	si:ch73-63e15.2	86	78.323	Paramormyrops_kingsleyae
ENSIPUG00000000537	si:ch73-63e15.2	70	73.320	ENSPSIG00000002852	SBNO2	99	73.320	Pelodiscus_sinensis
ENSIPUG00000000537	si:ch73-63e15.2	86	75.768	ENSPMGG00000014375	si:ch73-63e15.2	90	77.083	Periophthalmus_magnuspinnatus
ENSIPUG00000000537	si:ch73-63e15.2	84	67.418	ENSPEMG00000024122	Sbno2	89	65.347	Peromyscus_maniculatus_bairdii
ENSIPUG00000000537	si:ch73-63e15.2	96	63.973	ENSPCIG00000011264	SBNO2	90	65.632	Phascolarctos_cinereus
ENSIPUG00000000537	si:ch73-63e15.2	87	79.325	ENSPFOG00000004096	si:ch73-63e15.2	99	78.602	Poecilia_formosa
ENSIPUG00000000537	si:ch73-63e15.2	87	79.241	ENSPLAG00000014653	si:ch73-63e15.2	79	78.506	Poecilia_latipinna
ENSIPUG00000000537	si:ch73-63e15.2	87	79.241	ENSPMEG00000002129	si:ch73-63e15.2	96	76.627	Poecilia_mexicana
ENSIPUG00000000537	si:ch73-63e15.2	94	74.189	ENSPREG00000006755	si:ch73-63e15.2	87	71.761	Poecilia_reticulata
ENSIPUG00000000537	si:ch73-63e15.2	80	68.018	ENSPCAG00000012256	SBNO2	80	68.018	Procavia_capensis
ENSIPUG00000000537	si:ch73-63e15.2	85	61.591	ENSPCOG00000015216	SBNO2	91	60.599	Propithecus_coquereli
ENSIPUG00000000537	si:ch73-63e15.2	92	76.108	ENSPNYG00000019926	si:ch73-63e15.2	78	80.000	Pundamilia_nyererei
ENSIPUG00000000537	si:ch73-63e15.2	89	73.616	ENSPNAG00000026609	sbno2a	99	68.348	Pygocentrus_nattereri
ENSIPUG00000000537	si:ch73-63e15.2	99	81.060	ENSPNAG00000020260	si:ch73-63e15.2	100	80.739	Pygocentrus_nattereri
ENSIPUG00000000537	si:ch73-63e15.2	84	68.480	ENSRNOG00000013987	Sbno2	89	69.379	Rattus_norvegicus
ENSIPUG00000000537	si:ch73-63e15.2	81	64.591	ENSRBIG00000009740	SBNO2	90	65.104	Rhinopithecus_bieti
ENSIPUG00000000537	si:ch73-63e15.2	73	72.940	ENSRROG00000044671	SBNO2	85	72.940	Rhinopithecus_roxellana
ENSIPUG00000000537	si:ch73-63e15.2	83	68.551	ENSSBOG00000023562	SBNO2	89	68.024	Saimiri_boliviensis_boliviensis
ENSIPUG00000000537	si:ch73-63e15.2	83	69.440	ENSSHAG00000010241	SBNO2	98	69.440	Sarcophilus_harrisii
ENSIPUG00000000537	si:ch73-63e15.2	97	68.410	ENSSFOG00015005861	si:ch73-63e15.2	96	78.231	Scleropages_formosus
ENSIPUG00000000537	si:ch73-63e15.2	97	73.233	ENSSMAG00000012489	si:ch73-63e15.2	74	80.346	Scophthalmus_maximus
ENSIPUG00000000537	si:ch73-63e15.2	86	79.780	ENSSDUG00000003527	si:ch73-63e15.2	74	80.763	Seriola_dumerili
ENSIPUG00000000537	si:ch73-63e15.2	86	79.695	ENSSLDG00000004623	si:ch73-63e15.2	74	80.676	Seriola_lalandi_dorsalis
ENSIPUG00000000537	si:ch73-63e15.2	85	81.472	ENSSPAG00000017717	si:ch73-63e15.2	76	81.472	Stegastes_partitus
ENSIPUG00000000537	si:ch73-63e15.2	83	69.913	ENSSSCG00000030042	SBNO2	88	69.869	Sus_scrofa
ENSIPUG00000000537	si:ch73-63e15.2	81	79.964	ENSTRUG00000018193	si:ch73-63e15.2	86	80.091	Takifugu_rubripes
ENSIPUG00000000537	si:ch73-63e15.2	76	70.504	ENSUAMG00000006568	SBNO2	91	74.757	Ursus_americanus
ENSIPUG00000000537	si:ch73-63e15.2	83	69.774	ENSVVUG00000022823	SBNO2	86	67.718	Vulpes_vulpes
ENSIPUG00000000537	si:ch73-63e15.2	76	76.316	ENSXETG00000021579	sbno2	90	76.768	Xenopus_tropicalis
ENSIPUG00000000537	si:ch73-63e15.2	71	79.787	ENSXCOG00000009209	si:ch73-63e15.2	94	76.673	Xiphophorus_couchianus
ENSIPUG00000000537	si:ch73-63e15.2	87	78.279	ENSXMAG00000012091	si:ch73-63e15.2	86	80.731	Xiphophorus_maculatus