EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000556 (Gene tree)
Gene ID: 108272508
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8046 bases
Position: chr12:27535042-27543087
Accession: 108272508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000765	RRP7	PF12923.7	2.5e-33	1	1
ENSIPUP00000000765	RRM_1	PF00076.22	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000820	-	1489	XM_017480953	ENSIPUP00000000765	281 (aa)	XP_017336442	A0A2D0S132

Gene Model

Click here to download ENSIPUG00000000556's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000556	rrp7a	95	50.752	ENSG00000189306	RRP7A	93	50.752	Homo_sapiens
ENSIPUG00000000556	rrp7a	100	65.957	ENSAPOG00000021250	rrp7a	100	65.957	Acanthochromis_polyacanthus
ENSIPUG00000000556	rrp7a	95	50.752	ENSAMEG00000009503	RRP7A	93	50.187	Ailuropoda_melanoleuca
ENSIPUG00000000556	rrp7a	100	65.263	ENSACIG00000023067	rrp7a	100	65.263	Amphilophus_citrinellus
ENSIPUG00000000556	rrp7a	100	67.376	ENSAOCG00000004115	rrp7a	100	67.376	Amphiprion_ocellaris
ENSIPUG00000000556	rrp7a	100	68.085	ENSAPEG00000013688	rrp7a	100	68.085	Amphiprion_percula
ENSIPUG00000000556	rrp7a	100	67.376	ENSATEG00000009664	rrp7a	100	67.376	Anabas_testudineus
ENSIPUG00000000556	rrp7a	100	50.000	ENSACAG00000003579	RRP7A	99	49.474	Anolis_carolinensis
ENSIPUG00000000556	rrp7a	95	51.128	ENSANAG00000031200	RRP7A	93	51.128	Aotus_nancymaae
ENSIPUG00000000556	rrp7a	100	68.794	ENSACLG00000016790	rrp7a	100	68.794	Astatotilapia_calliptera
ENSIPUG00000000556	rrp7a	100	71.886	ENSAMXG00000007921	rrp7a	96	71.886	Astyanax_mexicanus
ENSIPUG00000000556	rrp7a	94	50.000	ENSBTAG00000016510	RRP7A	97	48.375	Bos_taurus
ENSIPUG00000000556	rrp7a	95	50.752	ENSCJAG00000009668	RRP7A	93	50.752	Callithrix_jacchus
ENSIPUG00000000556	rrp7a	95	50.376	ENSCAFG00000000965	RRP7	93	50.376	Canis_familiaris
ENSIPUG00000000556	rrp7a	95	50.376	ENSCAFG00020000251	RRP7A	93	50.376	Canis_lupus_dingo
ENSIPUG00000000556	rrp7a	94	50.379	ENSCHIG00000026787	RRP7A	97	48.736	Capra_hircus
ENSIPUG00000000556	rrp7a	95	48.496	ENSTSYG00000000198	RRP7A	96	47.273	Carlito_syrichta
ENSIPUG00000000556	rrp7a	95	50.376	ENSCAPG00000002325	RRP7A	100	50.376	Cavia_aperea
ENSIPUG00000000556	rrp7a	95	50.752	ENSCPOG00000030547	RRP7A	93	50.752	Cavia_porcellus
ENSIPUG00000000556	rrp7a	74	53.846	ENSCCAG00000021486	RRP7A	88	53.846	Cebus_capucinus
ENSIPUG00000000556	rrp7a	95	50.376	ENSCLAG00000016715	RRP7A	93	50.376	Chinchilla_lanigera
ENSIPUG00000000556	rrp7a	95	50.752	ENSCSAG00000005657	RRP7A	93	50.752	Chlorocebus_sabaeus
ENSIPUG00000000556	rrp7a	100	48.239	ENSCPBG00000021814	RRP7A	100	47.719	Chrysemys_picta_bellii
ENSIPUG00000000556	rrp7a	80	35.931	ENSCSAVG00000002555	-	85	33.906	Ciona_savignyi
ENSIPUG00000000556	rrp7a	82	47.826	ENSCGRG00001005713	-	99	47.826	Cricetulus_griseus_chok1gshd
ENSIPUG00000000556	rrp7a	61	78.571	ENSCGRG00001021873	-	90	78.571	Cricetulus_griseus_chok1gshd
ENSIPUG00000000556	rrp7a	93	43.077	ENSCGRG00000000540	-	100	43.077	Cricetulus_griseus_crigri
ENSIPUG00000000556	rrp7a	95	50.000	ENSCGRG00000009567	-	93	50.000	Cricetulus_griseus_crigri
ENSIPUG00000000556	rrp7a	95	44.361	ENSCGRG00000000552	-	93	44.361	Cricetulus_griseus_crigri
ENSIPUG00000000556	rrp7a	100	66.312	ENSCSEG00000007185	rrp7a	100	66.312	Cynoglossus_semilaevis
ENSIPUG00000000556	rrp7a	100	67.021	ENSCVAG00000004349	rrp7a	100	67.021	Cyprinodon_variegatus
ENSIPUG00000000556	rrp7a	96	62.500	ENSDARG00000098934	rrp7a	97	62.500	Danio_rerio
ENSIPUG00000000556	rrp7a	95	51.880	ENSDNOG00000037442	RRP7A	89	50.545	Dasypus_novemcinctus
ENSIPUG00000000556	rrp7a	100	49.474	ENSDORG00000016138	Rrp7a	100	49.474	Dipodomys_ordii
ENSIPUG00000000556	rrp7a	94	32.222	FBgn0031764	CG9107	98	32.222	Drosophila_melanogaster
ENSIPUG00000000556	rrp7a	93	48.462	ENSETEG00000018025	RRP7A	100	48.846	Echinops_telfairi
ENSIPUG00000000556	rrp7a	97	42.125	ENSEBUG00000010231	rrp7a	93	41.392	Eptatretus_burgeri
ENSIPUG00000000556	rrp7a	95	50.376	ENSEASG00005000804	RRP7A	93	50.187	Equus_asinus_asinus
ENSIPUG00000000556	rrp7a	95	50.752	ENSECAG00000015168	RRP7	97	48.561	Equus_caballus
ENSIPUG00000000556	rrp7a	100	67.972	ENSELUG00000009036	rrp7a	100	67.972	Esox_lucius
ENSIPUG00000000556	rrp7a	95	50.752	ENSFCAG00000033258	RRP7A	74	50.752	Felis_catus
ENSIPUG00000000556	rrp7a	93	51.145	ENSFALG00000011635	RRP7A	91	49.818	Ficedula_albicollis
ENSIPUG00000000556	rrp7a	95	51.504	ENSFDAG00000001321	RRP7A	94	51.504	Fukomys_damarensis
ENSIPUG00000000556	rrp7a	100	65.248	ENSFHEG00000006098	rrp7a	97	65.248	Fundulus_heteroclitus
ENSIPUG00000000556	rrp7a	96	64.312	ENSGMOG00000006218	rrp7a	100	64.312	Gadus_morhua
ENSIPUG00000000556	rrp7a	96	51.838	ENSGALG00000011866	RRP7A	97	52.206	Gallus_gallus
ENSIPUG00000000556	rrp7a	100	64.539	ENSGAFG00000017459	rrp7a	100	64.539	Gambusia_affinis
ENSIPUG00000000556	rrp7a	96	63.197	ENSGACG00000007212	rrp7a	100	63.197	Gasterosteus_aculeatus
ENSIPUG00000000556	rrp7a	100	47.887	ENSGAGG00000014621	RRP7A	100	48.239	Gopherus_agassizii
ENSIPUG00000000556	rrp7a	95	50.000	ENSGGOG00000014957	RRP7A	93	50.000	Gorilla_gorilla
ENSIPUG00000000556	rrp7a	100	69.504	ENSHBUG00000021788	rrp7a	100	69.504	Haplochromis_burtoni
ENSIPUG00000000556	rrp7a	95	50.000	ENSHGLG00000015706	RRP7A	94	50.000	Heterocephalus_glaber_female
ENSIPUG00000000556	rrp7a	95	48.496	ENSHGLG00100008187	-	94	48.689	Heterocephalus_glaber_male
ENSIPUG00000000556	rrp7a	95	46.992	ENSHGLG00100009556	-	93	46.992	Heterocephalus_glaber_male
ENSIPUG00000000556	rrp7a	96	63.704	ENSHCOG00000005813	rrp7a	84	63.235	Hippocampus_comes
ENSIPUG00000000556	rrp7a	95	50.376	ENSSTOG00000003111	RRP7A	93	50.752	Ictidomys_tridecemlineatus
ENSIPUG00000000556	rrp7a	98	47.080	ENSJJAG00000019486	Rrp7a	96	47.273	Jaculus_jaculus
ENSIPUG00000000556	rrp7a	100	66.312	ENSKMAG00000013819	rrp7a	100	66.312	Kryptolebias_marmoratus
ENSIPUG00000000556	rrp7a	100	50.530	ENSLACG00000002670	RRP7A	100	50.530	Latimeria_chalumnae
ENSIPUG00000000556	rrp7a	98	49.455	ENSLAFG00000012447	RRP7A	96	49.455	Loxodonta_africana
ENSIPUG00000000556	rrp7a	95	50.376	ENSMFAG00000042855	RRP7A	93	50.376	Macaca_fascicularis
ENSIPUG00000000556	rrp7a	95	47.368	ENSMFAG00000041664	-	93	45.255	Macaca_fascicularis
ENSIPUG00000000556	rrp7a	95	48.689	ENSMMUG00000010193	-	93	48.689	Macaca_mulatta
ENSIPUG00000000556	rrp7a	95	43.985	ENSMMUG00000009716	RRP7A	92	43.985	Macaca_mulatta
ENSIPUG00000000556	rrp7a	95	51.128	ENSMNEG00000033705	RRP7A	93	51.128	Macaca_nemestrina
ENSIPUG00000000556	rrp7a	98	47.122	ENSMLEG00000040230	RRP7A	99	46.863	Mandrillus_leucophaeus
ENSIPUG00000000556	rrp7a	100	68.440	ENSMAMG00000009125	rrp7a	100	68.440	Mastacembelus_armatus
ENSIPUG00000000556	rrp7a	100	68.794	ENSMZEG00005005197	rrp7a	100	68.794	Maylandia_zebra
ENSIPUG00000000556	rrp7a	93	53.232	ENSMGAG00000011980	RRP7A	100	53.232	Meleagris_gallopavo
ENSIPUG00000000556	rrp7a	95	50.376	ENSMICG00000041800	RRP7A	93	50.376	Microcebus_murinus
ENSIPUG00000000556	rrp7a	100	65.480	ENSMMOG00000004976	rrp7a	100	65.480	Mola_mola
ENSIPUG00000000556	rrp7a	100	48.797	ENSMODG00000006914	RRP7A	99	48.797	Monodelphis_domestica
ENSIPUG00000000556	rrp7a	100	68.085	ENSMALG00000001933	rrp7a	100	68.085	Monopterus_albus
ENSIPUG00000000556	rrp7a	95	50.000	MGP_CAROLIEiJ_G0020092	Rrp7a	93	50.000	Mus_caroli
ENSIPUG00000000556	rrp7a	95	50.000	ENSMUSG00000018040	Rrp7a	96	77.551	Mus_musculus
ENSIPUG00000000556	rrp7a	95	49.248	MGP_PahariEiJ_G0020099	Rrp7a	93	49.248	Mus_pahari
ENSIPUG00000000556	rrp7a	95	50.000	MGP_SPRETEiJ_G0020990	Rrp7a	93	50.000	Mus_spretus
ENSIPUG00000000556	rrp7a	95	50.376	ENSMPUG00000016315	RRP7A	93	50.376	Mustela_putorius_furo
ENSIPUG00000000556	rrp7a	95	50.000	ENSMLUG00000012404	RRP7A	96	48.727	Myotis_lucifugus
ENSIPUG00000000556	rrp7a	95	48.120	ENSNGAG00000010039	Rrp7a	93	48.120	Nannospalax_galili
ENSIPUG00000000556	rrp7a	99	70.107	ENSNBRG00000001824	rrp7a	100	70.107	Neolamprologus_brichardi
ENSIPUG00000000556	rrp7a	95	50.376	ENSNLEG00000036258	RRP7A	100	48.772	Nomascus_leucogenys
ENSIPUG00000000556	rrp7a	100	50.175	ENSODEG00000015126	RRP7A	100	50.175	Octodon_degus
ENSIPUG00000000556	rrp7a	100	70.567	ENSONIG00000008364	rrp7a	99	70.567	Oreochromis_niloticus
ENSIPUG00000000556	rrp7a	83	44.492	ENSOANG00000015007	RRP7A	86	43.750	Ornithorhynchus_anatinus
ENSIPUG00000000556	rrp7a	99	42.500	ENSOCUG00000027434	RRP7A	97	42.500	Oryctolagus_cuniculus
ENSIPUG00000000556	rrp7a	99	63.701	ENSORLG00000014826	rrp7a	99	63.701	Oryzias_latipes
ENSIPUG00000000556	rrp7a	99	63.345	ENSORLG00020006078	rrp7a	99	63.345	Oryzias_latipes_hni
ENSIPUG00000000556	rrp7a	99	63.345	ENSORLG00015018190	rrp7a	99	63.345	Oryzias_latipes_hsok
ENSIPUG00000000556	rrp7a	98	64.855	ENSOMEG00000007090	rrp7a	99	64.855	Oryzias_melastigma
ENSIPUG00000000556	rrp7a	98	49.091	ENSOGAG00000002857	RRP7A	96	49.458	Otolemur_garnettii
ENSIPUG00000000556	rrp7a	94	50.000	ENSOARG00000018986	RRP7A	97	48.375	Ovis_aries
ENSIPUG00000000556	rrp7a	76	48.598	ENSPPAG00000029825	-	92	46.957	Pan_paniscus
ENSIPUG00000000556	rrp7a	77	52.074	ENSPPAG00000021416	-	77	52.074	Pan_paniscus
ENSIPUG00000000556	rrp7a	95	51.128	ENSPPRG00000022185	RRP7A	93	50.936	Panthera_pardus
ENSIPUG00000000556	rrp7a	95	36.531	ENSPTIG00000020965	RRP7A	92	35.294	Panthera_tigris_altaica
ENSIPUG00000000556	rrp7a	95	46.992	ENSPANG00000032001	-	93	46.067	Papio_anubis
ENSIPUG00000000556	rrp7a	95	50.376	ENSPANG00000025354	-	93	50.376	Papio_anubis
ENSIPUG00000000556	rrp7a	100	60.638	ENSPKIG00000007209	rrp7a	86	60.638	Paramormyrops_kingsleyae
ENSIPUG00000000556	rrp7a	88	50.800	ENSPSIG00000007988	RRP7A	92	50.800	Pelodiscus_sinensis
ENSIPUG00000000556	rrp7a	93	52.874	ENSPMGG00000009485	rrp7a	100	49.470	Periophthalmus_magnuspinnatus
ENSIPUG00000000556	rrp7a	95	50.376	ENSPEMG00000022265	Rrp7a	93	50.376	Peromyscus_maniculatus_bairdii
ENSIPUG00000000556	rrp7a	97	46.886	ENSPMAG00000002823	rrp7a	96	46.520	Petromyzon_marinus
ENSIPUG00000000556	rrp7a	100	49.123	ENSPCIG00000026195	RRP7A	100	49.129	Phascolarctos_cinereus
ENSIPUG00000000556	rrp7a	100	65.957	ENSPFOG00000001042	rrp7a	100	65.957	Poecilia_formosa
ENSIPUG00000000556	rrp7a	60	71.765	ENSPLAG00000010787	-	71	71.765	Poecilia_latipinna
ENSIPUG00000000556	rrp7a	60	71.765	ENSPLAG00000009537	rrp7a	71	71.765	Poecilia_latipinna
ENSIPUG00000000556	rrp7a	100	66.312	ENSPMEG00000018204	rrp7a	100	66.312	Poecilia_mexicana
ENSIPUG00000000556	rrp7a	100	64.539	ENSPREG00000016492	rrp7a	100	64.539	Poecilia_reticulata
ENSIPUG00000000556	rrp7a	95	50.376	ENSPPYG00000011897	RRP7A	93	50.376	Pongo_abelii
ENSIPUG00000000556	rrp7a	95	50.000	ENSPCOG00000014018	RRP7A	93	50.000	Propithecus_coquereli
ENSIPUG00000000556	rrp7a	85	45.378	ENSPVAG00000003330	RRP7A	92	45.378	Pteropus_vampyrus
ENSIPUG00000000556	rrp7a	100	68.794	ENSPNYG00000020343	rrp7a	100	68.794	Pundamilia_nyererei
ENSIPUG00000000556	rrp7a	100	74.733	ENSPNAG00000014376	rrp7a	100	74.733	Pygocentrus_nattereri
ENSIPUG00000000556	rrp7a	95	49.248	ENSRNOG00000022896	Rrp7a	93	49.248	Rattus_norvegicus
ENSIPUG00000000556	rrp7a	95	45.693	ENSRBIG00000040358	RRP7A	93	45.693	Rhinopithecus_bieti
ENSIPUG00000000556	rrp7a	95	50.936	ENSRROG00000036754	RRP7A	93	50.936	Rhinopithecus_roxellana
ENSIPUG00000000556	rrp7a	95	50.000	ENSSBOG00000009234	RRP7A	93	50.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000000556	rrp7a	76	54.673	ENSSHAG00000005715	RRP7A	100	54.630	Sarcophilus_harrisii
ENSIPUG00000000556	rrp7a	100	66.904	ENSSFOG00015012621	rrp7a	89	66.548	Scleropages_formosus
ENSIPUG00000000556	rrp7a	99	66.192	ENSSMAG00000004593	rrp7a	99	66.192	Scophthalmus_maximus
ENSIPUG00000000556	rrp7a	100	68.085	ENSSDUG00000016921	rrp7a	100	68.085	Seriola_dumerili
ENSIPUG00000000556	rrp7a	100	68.085	ENSSLDG00000024758	rrp7a	100	68.085	Seriola_lalandi_dorsalis
ENSIPUG00000000556	rrp7a	60	78.571	ENSSARG00000002133	-	66	78.571	Sorex_araneus
ENSIPUG00000000556	rrp7a	90	45.455	ENSSPUG00000005373	RRP7A	99	46.094	Sphenodon_punctatus
ENSIPUG00000000556	rrp7a	100	66.312	ENSSPAG00000016048	rrp7a	100	66.312	Stegastes_partitus
ENSIPUG00000000556	rrp7a	96	49.630	ENSSSCG00000033983	RRP7A	96	48.727	Sus_scrofa
ENSIPUG00000000556	rrp7a	93	51.527	ENSTGUG00000009647	RRP7A	100	51.527	Taeniopygia_guttata
ENSIPUG00000000556	rrp7a	100	63.830	ENSTRUG00000024726	rrp7a	100	63.830	Takifugu_rubripes
ENSIPUG00000000556	rrp7a	100	65.603	ENSTNIG00000010842	rrp7a	99	65.603	Tetraodon_nigroviridis
ENSIPUG00000000556	rrp7a	95	50.752	ENSUAMG00000026180	RRP7A	96	50.182	Ursus_americanus
ENSIPUG00000000556	rrp7a	98	47.273	ENSUMAG00000020394	RRP7A	96	47.636	Ursus_maritimus
ENSIPUG00000000556	rrp7a	93	50.192	ENSVVUG00000002248	-	65	50.192	Vulpes_vulpes
ENSIPUG00000000556	rrp7a	99	47.518	ENSXETG00000013414	rrp7a	99	47.872	Xenopus_tropicalis
ENSIPUG00000000556	rrp7a	100	63.958	ENSXCOG00000015955	rrp7a	100	63.958	Xiphophorus_couchianus
ENSIPUG00000000556	rrp7a	100	64.539	ENSXMAG00000006165	rrp7a	100	64.539	Xiphophorus_maculatus