EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000564 (Gene tree)
Gene ID: 108272499
Gene Symbol: poldip3
Alias: -
Full Name: DNA polymerase delta interacting protein 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6139 bases
Position: chr12:27544659-27550797
Accession: 108272499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000797	RRM_1	PF00076.22	1.5e-10	1	1
ENSIPUP00000000786	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000852	-	1050	-	ENSIPUP00000000797	349 (aa)	-	-
ENSIPUT00000000841	-	2068	XM_017480934	ENSIPUP00000000786	488 (aa)	XP_017336423	-

Gene Model

Click here to download ENSIPUG00000000564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000564	poldip3	100	48.449	ENSG00000100227	POLDIP3	100	47.733	Homo_sapiens
ENSIPUG00000000564	poldip3	86	58.531	ENSAPOG00000021223	poldip3	99	58.531	Acanthochromis_polyacanthus
ENSIPUG00000000564	poldip3	100	46.188	ENSAMEG00000009522	POLDIP3	98	45.964	Ailuropoda_melanoleuca
ENSIPUG00000000564	poldip3	100	56.589	ENSACIG00000023100	poldip3	100	56.331	Amphilophus_citrinellus
ENSIPUG00000000564	poldip3	88	65.257	ENSAOCG00000004142	poldip3	100	56.660	Amphiprion_ocellaris
ENSIPUG00000000564	poldip3	88	65.559	ENSAPEG00000013658	poldip3	100	56.660	Amphiprion_percula
ENSIPUG00000000564	poldip3	86	58.495	ENSATEG00000009633	poldip3	99	57.996	Anabas_testudineus
ENSIPUG00000000564	poldip3	95	46.585	ENSAPLG00000005154	POLDIP3	99	45.339	Anas_platyrhynchos
ENSIPUG00000000564	poldip3	100	43.919	ENSACAG00000003515	POLDIP3	98	44.289	Anolis_carolinensis
ENSIPUG00000000564	poldip3	62	45.588	ENSANAG00000024431	-	90	40.922	Aotus_nancymaae
ENSIPUG00000000564	poldip3	100	48.449	ENSANAG00000033566	-	100	48.210	Aotus_nancymaae
ENSIPUG00000000564	poldip3	95	57.738	ENSACLG00000016753	poldip3	86	56.746	Astatotilapia_calliptera
ENSIPUG00000000564	poldip3	85	66.667	ENSAMXG00000007939	poldip3	100	66.955	Astyanax_mexicanus
ENSIPUG00000000564	poldip3	100	48.058	ENSBTAG00000016511	POLDIP3	100	47.458	Bos_taurus
ENSIPUG00000000564	poldip3	100	48.449	ENSCJAG00000009628	POLDIP3	100	48.210	Callithrix_jacchus
ENSIPUG00000000564	poldip3	100	46.120	ENSCAFG00000000959	POLDIP3	100	45.982	Canis_familiaris
ENSIPUG00000000564	poldip3	100	49.043	ENSCAFG00020000227	POLDIP3	100	48.077	Canis_lupus_dingo
ENSIPUG00000000564	poldip3	100	45.578	ENSCHIG00000020171	POLDIP3	100	45.749	Capra_hircus
ENSIPUG00000000564	poldip3	100	47.494	ENSTSYG00000007189	POLDIP3	100	47.470	Carlito_syrichta
ENSIPUG00000000564	poldip3	88	52.941	ENSCAPG00000006798	POLDIP3	86	53.235	Cavia_aperea
ENSIPUG00000000564	poldip3	100	48.537	ENSCPOG00000019524	POLDIP3	100	48.655	Cavia_porcellus
ENSIPUG00000000564	poldip3	100	48.565	ENSCCAG00000027969	-	100	48.325	Cebus_capucinus
ENSIPUG00000000564	poldip3	100	42.506	ENSCCAG00000011395	-	100	42.300	Cebus_capucinus
ENSIPUG00000000564	poldip3	100	48.449	ENSCATG00000029583	POLDIP3	100	48.210	Cercocebus_atys
ENSIPUG00000000564	poldip3	100	49.517	ENSCLAG00000016864	POLDIP3	100	49.517	Chinchilla_lanigera
ENSIPUG00000000564	poldip3	100	46.396	ENSCSAG00000005654	POLDIP3	100	46.414	Chlorocebus_sabaeus
ENSIPUG00000000564	poldip3	100	43.820	ENSCPBG00000021819	POLDIP3	87	46.545	Chrysemys_picta_bellii
ENSIPUG00000000564	poldip3	100	48.681	ENSCANG00000027664	POLDIP3	100	47.962	Colobus_angolensis_palliatus
ENSIPUG00000000564	poldip3	100	46.778	ENSCGRG00001004211	-	100	47.470	Cricetulus_griseus_chok1gshd
ENSIPUG00000000564	poldip3	88	51.289	ENSCGRG00000009374	-	87	52.174	Cricetulus_griseus_crigri
ENSIPUG00000000564	poldip3	95	56.687	ENSCSEG00000007165	poldip3	100	54.475	Cynoglossus_semilaevis
ENSIPUG00000000564	poldip3	91	48.630	ENSCVAG00000004370	poldip3	98	53.846	Cyprinodon_variegatus
ENSIPUG00000000564	poldip3	90	56.513	ENSDARG00000099375	poldip3	99	57.231	Danio_rerio
ENSIPUG00000000564	poldip3	100	58.427	ENSDNOG00000037211	-	100	49.143	Dasypus_novemcinctus
ENSIPUG00000000564	poldip3	100	46.523	ENSDORG00000006590	Poldip3	100	46.539	Dipodomys_ordii
ENSIPUG00000000564	poldip3	96	41.274	ENSETEG00000018022	POLDIP3	99	42.469	Echinops_telfairi
ENSIPUG00000000564	poldip3	100	36.700	ENSEBUG00000001181	poldip3	96	35.918	Eptatretus_burgeri
ENSIPUG00000000564	poldip3	100	47.072	ENSEASG00005000795	POLDIP3	100	47.082	Equus_asinus_asinus
ENSIPUG00000000564	poldip3	100	47.072	ENSECAG00000018350	POLDIP3	100	47.082	Equus_caballus
ENSIPUG00000000564	poldip3	70	87.234	ENSEEUG00000001290	POLDIP3	68	86.316	Erinaceus_europaeus
ENSIPUG00000000564	poldip3	98	55.598	ENSELUG00000009005	poldip3	93	56.538	Esox_lucius
ENSIPUG00000000564	poldip3	100	50.000	ENSFCAG00000032029	POLDIP3	100	49.048	Felis_catus
ENSIPUG00000000564	poldip3	99	46.602	ENSFALG00000011621	POLDIP3	90	46.214	Ficedula_albicollis
ENSIPUG00000000564	poldip3	100	47.255	ENSFDAG00000019550	POLDIP3	100	46.875	Fukomys_damarensis
ENSIPUG00000000564	poldip3	100	56.328	ENSFHEG00000006083	poldip3	100	56.328	Fundulus_heteroclitus
ENSIPUG00000000564	poldip3	100	54.187	ENSGMOG00000006232	poldip3	100	54.545	Gadus_morhua
ENSIPUG00000000564	poldip3	100	45.205	ENSGALG00000011863	POLDIP3	100	45.639	Gallus_gallus
ENSIPUG00000000564	poldip3	95	53.743	ENSGAFG00000017465	poldip3	100	52.783	Gambusia_affinis
ENSIPUG00000000564	poldip3	100	51.111	ENSGACG00000007224	poldip3	100	52.372	Gasterosteus_aculeatus
ENSIPUG00000000564	poldip3	100	45.103	ENSGAGG00000014629	POLDIP3	97	46.951	Gopherus_agassizii
ENSIPUG00000000564	poldip3	100	48.687	ENSGGOG00000014961	POLDIP3	100	47.733	Gorilla_gorilla
ENSIPUG00000000564	poldip3	95	57.228	ENSHBUG00000021806	poldip3	83	56.634	Haplochromis_burtoni
ENSIPUG00000000564	poldip3	100	47.017	ENSHGLG00000013156	POLDIP3	100	46.988	Heterocephalus_glaber_female
ENSIPUG00000000564	poldip3	100	47.017	ENSHGLG00100009086	POLDIP3	100	46.988	Heterocephalus_glaber_male
ENSIPUG00000000564	poldip3	95	56.238	ENSHCOG00000005823	poldip3	98	58.218	Hippocampus_comes
ENSIPUG00000000564	poldip3	88	52.149	ENSSTOG00000008230	POLDIP3	87	52.754	Ictidomys_tridecemlineatus
ENSIPUG00000000564	poldip3	100	46.890	ENSJJAG00000018034	Poldip3	100	46.247	Jaculus_jaculus
ENSIPUG00000000564	poldip3	95	55.227	ENSKMAG00000013839	poldip3	100	55.382	Kryptolebias_marmoratus
ENSIPUG00000000564	poldip3	100	46.292	ENSLAFG00000014901	POLDIP3	98	46.693	Loxodonta_africana
ENSIPUG00000000564	poldip3	100	48.449	ENSMFAG00000044670	POLDIP3	100	48.210	Macaca_fascicularis
ENSIPUG00000000564	poldip3	100	46.396	ENSMMUG00000047046	POLDIP3	100	46.414	Macaca_mulatta
ENSIPUG00000000564	poldip3	100	48.449	ENSMNEG00000037068	POLDIP3	100	48.210	Macaca_nemestrina
ENSIPUG00000000564	poldip3	76	77.711	ENSMAMG00000009151	poldip3	100	77.711	Mastacembelus_armatus
ENSIPUG00000000564	poldip3	95	56.746	ENSMZEG00005005201	poldip3	100	56.548	Maylandia_zebra
ENSIPUG00000000564	poldip3	90	51.613	ENSMGAG00000011986	POLDIP3	99	45.203	Meleagris_gallopavo
ENSIPUG00000000564	poldip3	88	44.504	ENSMAUG00000014002	Poldip3	88	43.665	Mesocricetus_auratus
ENSIPUG00000000564	poldip3	100	47.494	ENSMICG00000041767	POLDIP3	100	47.952	Microcebus_murinus
ENSIPUG00000000564	poldip3	100	48.086	ENSMOCG00000014101	Poldip3	100	47.847	Microtus_ochrogaster
ENSIPUG00000000564	poldip3	100	55.342	ENSMMOG00000004982	poldip3	99	77.108	Mola_mola
ENSIPUG00000000564	poldip3	90	47.059	ENSMODG00000006932	-	52	47.500	Monodelphis_domestica
ENSIPUG00000000564	poldip3	100	47.343	MGP_CAROLIEiJ_G0020093	Poldip3	100	47.458	Mus_caroli
ENSIPUG00000000564	poldip3	100	46.973	ENSMUSG00000041815	Poldip3	100	47.826	Mus_musculus
ENSIPUG00000000564	poldip3	100	47.002	MGP_PahariEiJ_G0020100	Poldip3	100	47.002	Mus_pahari
ENSIPUG00000000564	poldip3	100	47.343	MGP_SPRETEiJ_G0020991	Poldip3	100	47.826	Mus_spretus
ENSIPUG00000000564	poldip3	100	46.275	ENSMPUG00000016314	POLDIP3	100	46.032	Mustela_putorius_furo
ENSIPUG00000000564	poldip3	88	49.598	ENSMLUG00000012408	POLDIP3	88	46.154	Myotis_lucifugus
ENSIPUG00000000564	poldip3	100	46.875	ENSNGAG00000000210	Poldip3	100	46.635	Nannospalax_galili
ENSIPUG00000000564	poldip3	95	57.570	ENSNBRG00000001837	poldip3	100	56.773	Neolamprologus_brichardi
ENSIPUG00000000564	poldip3	100	47.971	ENSNLEG00000015950	POLDIP3	100	47.017	Nomascus_leucogenys
ENSIPUG00000000564	poldip3	100	43.764	ENSMEUG00000013932	POLDIP3	100	46.450	Notamacropus_eugenii
ENSIPUG00000000564	poldip3	100	47.129	ENSODEG00000014224	POLDIP3	100	47.585	Octodon_degus
ENSIPUG00000000564	poldip3	95	57.228	ENSONIG00000008367	poldip3	100	56.238	Oreochromis_niloticus
ENSIPUG00000000564	poldip3	88	49.733	ENSOANG00000011029	POLDIP3	88	47.856	Ornithorhynchus_anatinus
ENSIPUG00000000564	poldip3	100	45.909	ENSOCUG00000016133	POLDIP3	99	47.166	Oryctolagus_cuniculus
ENSIPUG00000000564	poldip3	100	54.680	ENSORLG00000014799	poldip3	100	55.952	Oryzias_latipes
ENSIPUG00000000564	poldip3	95	55.709	ENSORLG00020006113	poldip3	100	55.952	Oryzias_latipes_hni
ENSIPUG00000000564	poldip3	95	55.906	ENSORLG00015018234	poldip3	100	55.952	Oryzias_latipes_hsok
ENSIPUG00000000564	poldip3	95	57.087	ENSOMEG00000007071	poldip3	100	56.349	Oryzias_melastigma
ENSIPUG00000000564	poldip3	100	44.144	ENSOGAG00000008216	POLDIP3	100	45.924	Otolemur_garnettii
ENSIPUG00000000564	poldip3	100	44.898	ENSOARG00000018993	POLDIP3	100	46.154	Ovis_aries
ENSIPUG00000000564	poldip3	100	48.449	ENSPPAG00000036619	POLDIP3	100	47.733	Pan_paniscus
ENSIPUG00000000564	poldip3	100	49.762	ENSPPRG00000021188	POLDIP3	100	48.810	Panthera_pardus
ENSIPUG00000000564	poldip3	100	49.762	ENSPTIG00000021396	POLDIP3	100	48.810	Panthera_tigris_altaica
ENSIPUG00000000564	poldip3	100	48.449	ENSPTRG00000014460	POLDIP3	100	47.733	Pan_troglodytes
ENSIPUG00000000564	poldip3	100	48.449	ENSPANG00000007026	POLDIP3	100	48.210	Papio_anubis
ENSIPUG00000000564	poldip3	90	54.357	ENSPKIG00000007231	poldip3	93	50.577	Paramormyrops_kingsleyae
ENSIPUG00000000564	poldip3	95	56.646	ENSPKIG00000002188	poldip3	94	56.478	Paramormyrops_kingsleyae
ENSIPUG00000000564	poldip3	95	45.631	ENSPSIG00000006347	POLDIP3	97	45.631	Pelodiscus_sinensis
ENSIPUG00000000564	poldip3	100	45.843	ENSPEMG00000021065	Poldip3	100	47.082	Peromyscus_maniculatus_bairdii
ENSIPUG00000000564	poldip3	100	35.398	ENSPMAG00000004894	poldip3	94	34.930	Petromyzon_marinus
ENSIPUG00000000564	poldip3	100	44.977	ENSPCIG00000026194	POLDIP3	100	47.143	Phascolarctos_cinereus
ENSIPUG00000000564	poldip3	100	55.112	ENSPFOG00000000926	poldip3	100	56.646	Poecilia_formosa
ENSIPUG00000000564	poldip3	100	57.180	ENSPLAG00000005558	poldip3	100	54.054	Poecilia_latipinna
ENSIPUG00000000564	poldip3	95	55.039	ENSPMEG00000018286	poldip3	100	54.581	Poecilia_mexicana
ENSIPUG00000000564	poldip3	95	53.626	ENSPREG00000016505	poldip3	100	53.462	Poecilia_reticulata
ENSIPUG00000000564	poldip3	100	45.946	ENSPPYG00000011899	POLDIP3	100	46.774	Pongo_abelii
ENSIPUG00000000564	poldip3	100	45.045	ENSPCAG00000009424	POLDIP3	100	45.565	Procavia_capensis
ENSIPUG00000000564	poldip3	100	47.494	ENSPCOG00000020271	POLDIP3	100	47.229	Propithecus_coquereli
ENSIPUG00000000564	poldip3	100	46.501	ENSPVAG00000014131	POLDIP3	100	46.727	Pteropus_vampyrus
ENSIPUG00000000564	poldip3	95	57.654	ENSPNYG00000020333	poldip3	100	56.660	Pundamilia_nyererei
ENSIPUG00000000564	poldip3	95	71.311	ENSPNAG00000023036	poldip3	100	72.041	Pygocentrus_nattereri
ENSIPUG00000000564	poldip3	100	45.598	ENSRNOG00000022877	Poldip3	100	46.061	Rattus_norvegicus
ENSIPUG00000000564	poldip3	100	48.210	ENSRBIG00000041676	POLDIP3	100	47.494	Rhinopithecus_bieti
ENSIPUG00000000564	poldip3	100	48.210	ENSRROG00000022379	POLDIP3	100	47.494	Rhinopithecus_roxellana
ENSIPUG00000000564	poldip3	100	43.532	ENSSBOG00000025315	-	100	43.532	Saimiri_boliviensis_boliviensis
ENSIPUG00000000564	poldip3	100	48.449	ENSSBOG00000021779	-	100	48.210	Saimiri_boliviensis_boliviensis
ENSIPUG00000000564	poldip3	100	44.898	ENSSHAG00000005316	POLDIP3	99	45.759	Sarcophilus_harrisii
ENSIPUG00000000564	poldip3	95	50.760	ENSSFOG00015012582	poldip3	93	63.839	Scleropages_formosus
ENSIPUG00000000564	poldip3	92	57.557	ENSSFOG00015012429	-	99	59.336	Scleropages_formosus
ENSIPUG00000000564	poldip3	100	53.109	ENSSMAG00000004609	poldip3	97	66.079	Scophthalmus_maximus
ENSIPUG00000000564	poldip3	95	57.654	ENSSDUG00000016881	poldip3	100	57.654	Seriola_dumerili
ENSIPUG00000000564	poldip3	95	58.333	ENSSLDG00000024763	poldip3	100	58.614	Seriola_lalandi_dorsalis
ENSIPUG00000000564	poldip3	88	47.967	ENSSARG00000011587	POLDIP3	87	44.749	Sorex_araneus
ENSIPUG00000000564	poldip3	100	45.270	ENSSPUG00000005362	POLDIP3	97	47.619	Sphenodon_punctatus
ENSIPUG00000000564	poldip3	100	48.049	ENSSSCG00000000039	POLDIP3	100	47.073	Sus_scrofa
ENSIPUG00000000564	poldip3	100	46.241	ENSTGUG00000009622	-	98	45.618	Taeniopygia_guttata
ENSIPUG00000000564	poldip3	100	59.221	ENSTRUG00000006604	poldip3	100	59.055	Takifugu_rubripes
ENSIPUG00000000564	poldip3	100	51.577	ENSTNIG00000010841	poldip3	100	50.909	Tetraodon_nigroviridis
ENSIPUG00000000564	poldip3	100	44.921	ENSTBEG00000010978	POLDIP3	100	46.061	Tupaia_belangeri
ENSIPUG00000000564	poldip3	88	49.326	ENSTTRG00000015129	POLDIP3	97	46.204	Tursiops_truncatus
ENSIPUG00000000564	poldip3	100	45.067	ENSUAMG00000026181	POLDIP3	100	45.783	Ursus_americanus
ENSIPUG00000000564	poldip3	88	52.161	ENSUMAG00000020385	POLDIP3	88	46.622	Ursus_maritimus
ENSIPUG00000000564	poldip3	100	48.804	ENSVVUG00000002231	POLDIP3	100	47.596	Vulpes_vulpes
ENSIPUG00000000564	poldip3	100	43.750	ENSXETG00000013412	poldip3	100	44.190	Xenopus_tropicalis
ENSIPUG00000000564	poldip3	97	52.261	ENSXCOG00000015952	poldip3	96	52.030	Xiphophorus_couchianus
ENSIPUG00000000564	poldip3	95	52.290	ENSXMAG00000006152	poldip3	100	52.115	Xiphophorus_maculatus