EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000590 (Gene tree)
Gene ID: 108260475
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 35012 bases
Position: chr2:25261119-25296130
Accession: 108260475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000816	tRNA_int_end_N2	PF12928.7	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000871	-	6235	XM_017460804	ENSIPUP00000000816	496 (aa)	XP_017316293	A0A2D0QG03

Gene Model

Click here to download ENSIPUG00000000590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000590	tsen54	79	60.714	ENSG00000182173	TSEN54	97	74.286	Homo_sapiens
ENSIPUG00000000590	tsen54	97	53.924	ENSAPOG00000009659	tsen54	99	51.090	Acanthochromis_polyacanthus
ENSIPUG00000000590	tsen54	69	63.399	ENSAMEG00000009414	TSEN54	96	42.166	Ailuropoda_melanoleuca
ENSIPUG00000000590	tsen54	97	54.400	ENSAOCG00000000152	tsen54	95	54.400	Amphiprion_ocellaris
ENSIPUG00000000590	tsen54	97	54.200	ENSAPEG00000018931	tsen54	95	54.200	Amphiprion_percula
ENSIPUG00000000590	tsen54	97	51.036	ENSATEG00000019860	tsen54	98	51.816	Anabas_testudineus
ENSIPUG00000000590	tsen54	85	43.736	ENSAPLG00000009419	TSEN54	99	42.857	Anas_platyrhynchos
ENSIPUG00000000590	tsen54	99	42.424	ENSACAG00000006714	TSEN54	99	42.614	Anolis_carolinensis
ENSIPUG00000000590	tsen54	76	63.871	ENSANAG00000024061	TSEN54	98	41.556	Aotus_nancymaae
ENSIPUG00000000590	tsen54	97	51.953	ENSACLG00000019800	tsen54	97	52.539	Astatotilapia_calliptera
ENSIPUG00000000590	tsen54	97	62.028	ENSAMXG00000006546	tsen54	100	61.004	Astyanax_mexicanus
ENSIPUG00000000590	tsen54	79	61.176	ENSBTAG00000000824	TSEN54	99	41.392	Bos_taurus
ENSIPUG00000000590	tsen54	76	63.871	ENSCJAG00000014278	TSEN54	98	41.777	Callithrix_jacchus
ENSIPUG00000000590	tsen54	79	59.763	ENSCAFG00000004798	TSEN54	99	41.513	Canis_familiaris
ENSIPUG00000000590	tsen54	79	59.763	ENSCAFG00020000312	TSEN54	99	41.513	Canis_lupus_dingo
ENSIPUG00000000590	tsen54	79	60.588	ENSCHIG00000019908	TSEN54	99	41.651	Capra_hircus
ENSIPUG00000000590	tsen54	85	35.456	ENSTSYG00000037439	TSEN54	99	40.890	Carlito_syrichta
ENSIPUG00000000590	tsen54	96	42.074	ENSCCAG00000036624	TSEN54	98	41.917	Cebus_capucinus
ENSIPUG00000000590	tsen54	76	63.871	ENSCATG00000042877	TSEN54	98	41.366	Cercocebus_atys
ENSIPUG00000000590	tsen54	96	41.797	ENSCLAG00000002924	TSEN54	99	41.333	Chinchilla_lanigera
ENSIPUG00000000590	tsen54	79	60.714	ENSCSAG00000004809	TSEN54	99	41.366	Chlorocebus_sabaeus
ENSIPUG00000000590	tsen54	96	43.295	ENSCPBG00000028071	TSEN54	98	42.337	Chrysemys_picta_bellii
ENSIPUG00000000590	tsen54	79	60.714	ENSCANG00000028053	TSEN54	99	40.987	Colobus_angolensis_palliatus
ENSIPUG00000000590	tsen54	98	41.075	ENSCGRG00001020029	Tsen54	99	40.115	Cricetulus_griseus_chok1gshd
ENSIPUG00000000590	tsen54	83	40.181	ENSCGRG00000016289	Tsen54	99	39.052	Cricetulus_griseus_crigri
ENSIPUG00000000590	tsen54	80	45.972	ENSCSEG00000020586	tsen54	99	45.972	Cynoglossus_semilaevis
ENSIPUG00000000590	tsen54	80	54.146	ENSDARG00000036844	tsen54	100	52.392	Danio_rerio
ENSIPUG00000000590	tsen54	76	62.987	ENSDNOG00000018452	TSEN54	99	41.839	Dasypus_novemcinctus
ENSIPUG00000000590	tsen54	79	60.119	ENSDORG00000004073	Tsen54	99	41.978	Dipodomys_ordii
ENSIPUG00000000590	tsen54	98	40.987	ENSEASG00005000579	TSEN54	99	40.038	Equus_asinus_asinus
ENSIPUG00000000590	tsen54	98	37.640	ENSECAG00000004924	TSEN54	99	37.640	Equus_caballus
ENSIPUG00000000590	tsen54	65	73.196	ENSEEUG00000008467	TSEN54	71	73.196	Erinaceus_europaeus
ENSIPUG00000000590	tsen54	98	48.333	ENSELUG00000017703	tsen54	92	49.156	Esox_lucius
ENSIPUG00000000590	tsen54	79	60.947	ENSFCAG00000023712	TSEN54	99	41.808	Felis_catus
ENSIPUG00000000590	tsen54	92	44.807	ENSFALG00000001119	TSEN54	92	43.992	Ficedula_albicollis
ENSIPUG00000000590	tsen54	85	41.593	ENSFDAG00000019090	TSEN54	99	41.886	Fukomys_damarensis
ENSIPUG00000000590	tsen54	97	52.165	ENSFHEG00000005470	tsen54	98	52.165	Fundulus_heteroclitus
ENSIPUG00000000590	tsen54	84	55.952	ENSGMOG00000013146	tsen54	99	55.952	Gadus_morhua
ENSIPUG00000000590	tsen54	95	41.373	ENSGALG00000047163	TSEN54	98	40.588	Gallus_gallus
ENSIPUG00000000590	tsen54	97	51.670	ENSGAFG00000005111	tsen54	98	51.866	Gambusia_affinis
ENSIPUG00000000590	tsen54	96	50.816	ENSGACG00000014987	tsen54	99	51.020	Gasterosteus_aculeatus
ENSIPUG00000000590	tsen54	100	42.164	ENSGAGG00000006825	TSEN54	99	42.164	Gopherus_agassizii
ENSIPUG00000000590	tsen54	76	64.052	ENSGGOG00000009417	TSEN54	99	41.992	Gorilla_gorilla
ENSIPUG00000000590	tsen54	87	50.324	ENSHBUG00000018296	tsen54	98	44.724	Haplochromis_burtoni
ENSIPUG00000000590	tsen54	99	42.614	ENSHGLG00000007979	TSEN54	99	42.614	Heterocephalus_glaber_female
ENSIPUG00000000590	tsen54	99	41.856	ENSHGLG00100005497	TSEN54	99	41.856	Heterocephalus_glaber_male
ENSIPUG00000000590	tsen54	80	48.219	ENSHCOG00000007481	tsen54	99	48.219	Hippocampus_comes
ENSIPUG00000000590	tsen54	99	41.477	ENSSTOG00000012883	TSEN54	99	41.055	Ictidomys_tridecemlineatus
ENSIPUG00000000590	tsen54	98	42.697	ENSJJAG00000007365	Tsen54	99	42.697	Jaculus_jaculus
ENSIPUG00000000590	tsen54	97	52.703	ENSKMAG00000006944	tsen54	98	52.703	Kryptolebias_marmoratus
ENSIPUG00000000590	tsen54	97	51.267	ENSLBEG00000004199	tsen54	97	51.267	Labrus_bergylta
ENSIPUG00000000590	tsen54	96	36.873	ENSLACG00000009497	TSEN54	99	36.873	Latimeria_chalumnae
ENSIPUG00000000590	tsen54	97	51.048	ENSLOCG00000011191	tsen54	97	50.857	Lepisosteus_oculatus
ENSIPUG00000000590	tsen54	75	67.939	ENSLAFG00000011655	TSEN54	92	42.181	Loxodonta_africana
ENSIPUG00000000590	tsen54	79	60.714	ENSMFAG00000000712	TSEN54	99	41.366	Macaca_fascicularis
ENSIPUG00000000590	tsen54	79	60.714	ENSMNEG00000029199	TSEN54	99	41.176	Macaca_nemestrina
ENSIPUG00000000590	tsen54	65	74.227	ENSMLEG00000044168	TSEN54	88	41.722	Mandrillus_leucophaeus
ENSIPUG00000000590	tsen54	97	53.984	ENSMAMG00000019773	tsen54	97	53.984	Mastacembelus_armatus
ENSIPUG00000000590	tsen54	97	51.758	ENSMZEG00005000884	tsen54	97	52.344	Maylandia_zebra
ENSIPUG00000000590	tsen54	98	40.755	ENSMGAG00000009556	TSEN54	99	40.449	Meleagris_gallopavo
ENSIPUG00000000590	tsen54	99	41.221	ENSMAUG00000016838	Tsen54	99	40.267	Mesocricetus_auratus
ENSIPUG00000000590	tsen54	79	60.119	ENSMICG00000044012	TSEN54	99	43.133	Microcebus_murinus
ENSIPUG00000000590	tsen54	99	42.667	ENSMOCG00000021585	Tsen54	99	41.714	Microtus_ochrogaster
ENSIPUG00000000590	tsen54	96	51.446	ENSMMOG00000020189	tsen54	99	52.066	Mola_mola
ENSIPUG00000000590	tsen54	96	41.794	ENSMODG00000007438	TSEN54	97	41.264	Monodelphis_domestica
ENSIPUG00000000590	tsen54	97	52.539	ENSMALG00000020573	tsen54	97	52.734	Monopterus_albus
ENSIPUG00000000590	tsen54	99	42.533	MGP_CAROLIEiJ_G0017417	Tsen54	99	41.777	Mus_caroli
ENSIPUG00000000590	tsen54	99	41.948	ENSMUSG00000020781	Tsen54	99	41.011	Mus_musculus
ENSIPUG00000000590	tsen54	99	42.724	MGP_PahariEiJ_G0018547	Tsen54	99	42.724	Mus_pahari
ENSIPUG00000000590	tsen54	99	42.135	MGP_SPRETEiJ_G0018262	Tsen54	99	41.199	Mus_spretus
ENSIPUG00000000590	tsen54	99	39.474	ENSMPUG00000013870	TSEN54	99	39.811	Mustela_putorius_furo
ENSIPUG00000000590	tsen54	98	40.039	ENSMLUG00000015298	TSEN54	99	41.440	Myotis_lucifugus
ENSIPUG00000000590	tsen54	99	43.048	ENSNGAG00000015673	Tsen54	99	43.048	Nannospalax_galili
ENSIPUG00000000590	tsen54	65	66.667	ENSMEUG00000011908	TSEN54	70	66.667	Notamacropus_eugenii
ENSIPUG00000000590	tsen54	73	56.429	ENSOPRG00000012513	TSEN54	72	56.429	Ochotona_princeps
ENSIPUG00000000590	tsen54	97	53.175	ENSONIG00000009543	tsen54	97	53.175	Oreochromis_niloticus
ENSIPUG00000000590	tsen54	99	38.858	ENSOCUG00000009875	TSEN54	99	38.674	Oryctolagus_cuniculus
ENSIPUG00000000590	tsen54	97	51.308	ENSORLG00000000852	tsen54	98	51.509	Oryzias_latipes
ENSIPUG00000000590	tsen54	97	51.111	ENSORLG00020018221	tsen54	98	51.313	Oryzias_latipes_hni
ENSIPUG00000000590	tsen54	97	50.909	ENSORLG00015009413	tsen54	99	50.909	Oryzias_latipes_hsok
ENSIPUG00000000590	tsen54	97	52.236	ENSOMEG00000014402	tsen54	95	52.236	Oryzias_melastigma
ENSIPUG00000000590	tsen54	76	59.091	ENSOGAG00000001442	TSEN54	99	39.535	Otolemur_garnettii
ENSIPUG00000000590	tsen54	65	69.072	ENSOARG00000010361	TSEN54	99	39.535	Ovis_aries
ENSIPUG00000000590	tsen54	74	64.085	ENSPPAG00000043519	TSEN54	99	41.633	Pan_paniscus
ENSIPUG00000000590	tsen54	79	61.538	ENSPPRG00000009162	TSEN54	99	41.996	Panthera_pardus
ENSIPUG00000000590	tsen54	65	75.258	ENSPTIG00000019312	TSEN54	96	41.266	Panthera_tigris_altaica
ENSIPUG00000000590	tsen54	79	60.714	ENSPTRG00000009646	TSEN54	99	41.556	Pan_troglodytes
ENSIPUG00000000590	tsen54	99	42.636	ENSPANG00000020133	TSEN54	99	42.607	Papio_anubis
ENSIPUG00000000590	tsen54	97	48.339	ENSPKIG00000023018	tsen54	99	47.059	Paramormyrops_kingsleyae
ENSIPUG00000000590	tsen54	80	39.450	ENSPSIG00000012807	TSEN54	100	38.532	Pelodiscus_sinensis
ENSIPUG00000000590	tsen54	93	41.309	ENSPMGG00000019578	tsen54	99	41.309	Periophthalmus_magnuspinnatus
ENSIPUG00000000590	tsen54	98	40.883	ENSPEMG00000014857	Tsen54	99	40.115	Peromyscus_maniculatus_bairdii
ENSIPUG00000000590	tsen54	97	51.378	ENSPFOG00000022740	tsen54	98	52.250	Poecilia_formosa
ENSIPUG00000000590	tsen54	97	51.389	ENSPLAG00000014847	tsen54	98	51.587	Poecilia_latipinna
ENSIPUG00000000590	tsen54	97	51.874	ENSPMEG00000022876	tsen54	98	52.071	Poecilia_mexicana
ENSIPUG00000000590	tsen54	99	52.390	ENSPREG00000013090	tsen54	99	52.390	Poecilia_reticulata
ENSIPUG00000000590	tsen54	90	43.013	ENSPPYG00000008629	TSEN54	99	43.202	Pongo_abelii
ENSIPUG00000000590	tsen54	71	61.935	ENSPCAG00000002093	TSEN54	71	61.935	Procavia_capensis
ENSIPUG00000000590	tsen54	79	59.172	ENSPCOG00000027880	TSEN54	99	42.056	Propithecus_coquereli
ENSIPUG00000000590	tsen54	79	61.176	ENSPVAG00000008446	TSEN54	75	61.176	Pteropus_vampyrus
ENSIPUG00000000590	tsen54	93	51.004	ENSPNYG00000010217	tsen54	99	51.606	Pundamilia_nyererei
ENSIPUG00000000590	tsen54	100	62.760	ENSPNAG00000003770	tsen54	100	64.176	Pygocentrus_nattereri
ENSIPUG00000000590	tsen54	98	42.197	ENSRNOG00000004598	Tsen54	99	41.233	Rattus_norvegicus
ENSIPUG00000000590	tsen54	79	60.714	ENSRBIG00000043040	TSEN54	99	40.987	Rhinopithecus_bieti
ENSIPUG00000000590	tsen54	79	60.119	ENSRROG00000030797	TSEN54	99	40.797	Rhinopithecus_roxellana
ENSIPUG00000000590	tsen54	99	40.039	ENSSBOG00000013543	TSEN54	98	40.039	Saimiri_boliviensis_boliviensis
ENSIPUG00000000590	tsen54	99	40.187	ENSSHAG00000018127	TSEN54	98	40.187	Sarcophilus_harrisii
ENSIPUG00000000590	tsen54	79	49.282	ENSSFOG00015004093	tsen54	99	49.522	Scleropages_formosus
ENSIPUG00000000590	tsen54	97	52.456	ENSSMAG00000012449	tsen54	98	51.473	Scophthalmus_maximus
ENSIPUG00000000590	tsen54	97	52.918	ENSSDUG00000021506	tsen54	97	53.307	Seriola_dumerili
ENSIPUG00000000590	tsen54	97	52.724	ENSSLDG00000016303	tsen54	97	53.113	Seriola_lalandi_dorsalis
ENSIPUG00000000590	tsen54	79	39.437	ENSSPUG00000008988	TSEN54	99	37.671	Sphenodon_punctatus
ENSIPUG00000000590	tsen54	80	51.238	ENSSPAG00000008047	tsen54	99	51.238	Stegastes_partitus
ENSIPUG00000000590	tsen54	93	53.376	ENSSPAG00000008098	-	99	53.376	Stegastes_partitus
ENSIPUG00000000590	tsen54	65	74.227	ENSSSCG00000036852	TSEN54	99	41.527	Sus_scrofa
ENSIPUG00000000590	tsen54	85	44.201	ENSTGUG00000008548	TSEN54	99	43.326	Taeniopygia_guttata
ENSIPUG00000000590	tsen54	99	50.593	ENSTRUG00000004230	tsen54	99	51.383	Takifugu_rubripes
ENSIPUG00000000590	tsen54	96	50.800	ENSTNIG00000011281	tsen54	99	51.758	Tetraodon_nigroviridis
ENSIPUG00000000590	tsen54	65	70.707	ENSTTRG00000015828	TSEN54	99	40.043	Tursiops_truncatus
ENSIPUG00000000590	tsen54	79	39.269	ENSUAMG00000010045	TSEN54	99	39.269	Ursus_americanus
ENSIPUG00000000590	tsen54	55	73.810	ENSUMAG00000008979	TSEN54	70	73.810	Ursus_maritimus
ENSIPUG00000000590	tsen54	67	63.399	ENSVVUG00000011411	TSEN54	98	41.729	Vulpes_vulpes
ENSIPUG00000000590	tsen54	96	41.602	ENSXETG00000012532	tsen54	99	41.259	Xenopus_tropicalis
ENSIPUG00000000590	tsen54	96	50.205	ENSXCOG00000018245	tsen54	99	50.410	Xiphophorus_couchianus
ENSIPUG00000000590	tsen54	97	52.079	ENSXMAG00000018818	tsen54	98	52.277	Xiphophorus_maculatus