EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000000616 (Gene tree)
Gene ID
108264012
Gene Symbol
ddx6
Alias
p54a|si:ch211-147p17.1
Full Name
DEAD-box helicase 6
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
24617 bases
Position
chr4:17599728-17624344
Accession
108264012
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000000903DEADPF00270.294.4e-4411
ENSIPUP00000000898DEADPF00270.294.8e-4411
ENSIPUP00000000875DEADPF00270.295.1e-4411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000000958-1407-ENSIPUP00000000898468 (aa)--
ENSIPUT00000000963-1353-ENSIPUP00000000903450 (aa)--
ENSIPUT00000000935-2182XM_017465303ENSIPUP00000000875484 (aa)XP_017320792A0A2D0QQQ0
Gene Model
Click here to download ENSIPUG00000000616's gene model file
Pathways
Pathway IDPathway NameSource
ipu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000616's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000000616ddx67938.710ENSIPUG00000005117if4a19138.710
ENSIPUG00000000616ddx68335.176ENSIPUG00000004876ddx205035.176
ENSIPUG00000000616ddx67938.710ENSIPUG00000012038eif4a29238.710
ENSIPUG00000000616ddx69980.550ENSIPUG00000008367-9980.421
ENSIPUG00000000616ddx68036.316ENSIPUG00000015733DDX39B8236.316
ENSIPUG00000000616ddx67938.710ENSIPUG00000009463EIF4A29038.710
ENSIPUG00000000616ddx67132.425ENSIPUG00000009936ddx3xb5532.425
ENSIPUG00000000616ddx66932.174ENSIPUG00000014551ddx555732.174
ENSIPUG00000000616ddx66830.606ENSIPUG00000012876ddx185630.699
ENSIPUG00000000616ddx67736.533ENSIPUG00000022795zgc:1936907736.533
ENSIPUG00000000616ddx67837.831ENSIPUG00000023912ddx198337.831
ENSIPUG00000000616ddx67831.662ENSIPUG00000024627ddx275430.282
ENSIPUG00000000616ddx69881.034ENSIPUG00000012823DDX69880.597
ENSIPUG00000000616ddx68233.418ENSIPUG00000023788ddx478333.418
ENSIPUG00000000616ddx67240.678ENSIPUG00000003494ddx15340.678
ENSIPUG00000000616ddx67630.952ENSIPUG00000006602ddx567230.952
ENSIPUG00000000616ddx67831.746ENSIPUG00000008100Ddx595931.746
ENSIPUG00000000616ddx68036.316ENSIPUG00000021341DDX39A8936.316
ENSIPUG00000000616ddx67332.782ENSIPUG00000001845ddx45932.782
ENSIPUG00000000616ddx68035.526ENSIPUG00000021552ddx39aa8935.526
ENSIPUG00000000616ddx67232.153ENSIPUG00000023024ddx3xa5431.510
ENSIPUG00000000616ddx67830.952ENSIPUG00000016171ddx416030.952
ENSIPUG00000000616ddx67532.961ENSIPUG00000005386ddx497532.961
ENSIPUG00000000616ddx67032.153ENSIPUG00000007815ddx55432.153
ENSIPUG00000000616ddx66932.036ENSIPUG00000014448ddx56430.375
ENSIPUG00000000616ddx68037.566ENSIPUG00000021785eif4a39237.566
ENSIPUG00000000616ddx67932.292ENSIPUG00000023423ddx435430.000
ENSIPUG00000000616ddx67032.743ENSIPUG00000015768si:dkey-156n14.57431.208
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000000616ddx69987.785ENSG00000110367DDX69987.992Homo_sapiens
ENSIPUG00000000616ddx69993.789ENSAPOG00000007695ddx69993.789Acanthochromis_polyacanthus
ENSIPUG00000000616ddx69987.578ENSAMEG00000006073DDX69987.785Ailuropoda_melanoleuca
ENSIPUG00000000616ddx69979.296ENSACIG00000023989ddx69979.296Amphilophus_citrinellus
ENSIPUG00000000616ddx69993.789ENSAOCG00000022849ddx69993.789Amphiprion_ocellaris
ENSIPUG00000000616ddx69993.789ENSAPEG00000013047ddx69993.789Amphiprion_percula
ENSIPUG00000000616ddx69993.168ENSATEG00000009693ddx69993.789Anabas_testudineus
ENSIPUG00000000616ddx69987.578ENSAPLG00000007274DDX69987.785Anas_platyrhynchos
ENSIPUG00000000616ddx69987.371ENSACAG00000017134DDX69987.371Anolis_carolinensis
ENSIPUG00000000616ddx69961.062ENSANAG00000032103-9961.283Aotus_nancymaae
ENSIPUG00000000616ddx69983.437ENSANAG00000038280-9983.644Aotus_nancymaae
ENSIPUG00000000616ddx69992.961ENSACLG00000022164ddx69993.582Astatotilapia_calliptera
ENSIPUG00000000616ddx610096.281ENSAMXG00000019553ddx610096.281Astyanax_mexicanus
ENSIPUG00000000616ddx69987.578ENSBTAG00000009067DDX69987.785Bos_taurus
ENSIPUG00000000616ddx69987.578ENSCJAG00000013591DDX69987.785Callithrix_jacchus
ENSIPUG00000000616ddx69987.578ENSCAFG00000012442DDX69987.785Canis_familiaris
ENSIPUG00000000616ddx69987.578ENSCAFG00020013150DDX69987.785Canis_lupus_dingo
ENSIPUG00000000616ddx69987.785ENSCHIG00000026114DDX69987.992Capra_hircus
ENSIPUG00000000616ddx69987.578ENSTSYG00000026313DDX69987.785Carlito_syrichta
ENSIPUG00000000616ddx68361.139ENSCAPG00000013040DDX69961.519Cavia_aperea
ENSIPUG00000000616ddx69982.278ENSCPOG00000010587Ddx69982.489Cavia_porcellus
ENSIPUG00000000616ddx69983.437ENSCCAG00000021636-9983.644Cebus_capucinus
ENSIPUG00000000616ddx69968.365ENSCATG00000009414-9968.365Cercocebus_atys
ENSIPUG00000000616ddx69987.785ENSCATG00000045025DDX69987.992Cercocebus_atys
ENSIPUG00000000616ddx69987.371ENSCLAG00000016749DDX69987.578Chinchilla_lanigera
ENSIPUG00000000616ddx69987.785ENSCSAG00000002564DDX69987.992Chlorocebus_sabaeus
ENSIPUG00000000616ddx68993.494ENSCHOG00000007565DDX69993.494Choloepus_hoffmanni
ENSIPUG00000000616ddx69986.957ENSCPBG00000004323DDX69987.164Chrysemys_picta_bellii
ENSIPUG00000000616ddx69978.261ENSCANG00000042664DDX69978.468Colobus_angolensis_palliatus
ENSIPUG00000000616ddx69987.371ENSCGRG00001023465Ddx69987.578Cricetulus_griseus_chok1gshd
ENSIPUG00000000616ddx69987.371ENSCGRG00000014165Ddx69987.578Cricetulus_griseus_crigri
ENSIPUG00000000616ddx69991.718ENSCSEG00000006875ddx69991.718Cynoglossus_semilaevis
ENSIPUG00000000616ddx69991.511ENSCVAG00000002540ddx69991.511Cyprinodon_variegatus
ENSIPUG00000000616ddx610095.455ENSDARG00000061338ddx610095.455Danio_rerio
ENSIPUG00000000616ddx69982.887ENSDNOG00000014447DDX69983.093Dasypus_novemcinctus
ENSIPUG00000000616ddx68879.343ENSDORG00000001037Ddx610079.577Dipodomys_ordii
ENSIPUG00000000616ddx66494.186ENSETEG00000007589-6994.186Echinops_telfairi
ENSIPUG00000000616ddx65686.641ENSEBUG00000010009ddx67186.641Eptatretus_burgeri
ENSIPUG00000000616ddx69987.578ENSEASG00005004961DDX69987.785Equus_asinus_asinus
ENSIPUG00000000616ddx69987.578ENSECAG00000000539DDX69987.785Equus_caballus
ENSIPUG00000000616ddx68879.812ENSEEUG00000002824DDX610080.047Erinaceus_europaeus
ENSIPUG00000000616ddx69988.821ENSELUG00000022660ddx69989.634Esox_lucius
ENSIPUG00000000616ddx69987.578ENSFCAG00000029360DDX69987.785Felis_catus
ENSIPUG00000000616ddx69987.578ENSFALG00000009831DDX69987.785Ficedula_albicollis
ENSIPUG00000000616ddx69987.578ENSFDAG00000012457DDX69987.785Fukomys_damarensis
ENSIPUG00000000616ddx69992.133ENSFHEG00000021202ddx69992.133Fundulus_heteroclitus
ENSIPUG00000000616ddx610091.753ENSGMOG00000009542ddx610091.753Gadus_morhua
ENSIPUG00000000616ddx69987.578ENSGALG00000033064DDX69987.785Gallus_gallus
ENSIPUG00000000616ddx69991.511ENSGAFG00000020279ddx69991.511Gambusia_affinis
ENSIPUG00000000616ddx69990.062ENSGACG00000012258ddx69990.062Gasterosteus_aculeatus
ENSIPUG00000000616ddx69987.164ENSGAGG00000020608DDX69987.371Gopherus_agassizii
ENSIPUG00000000616ddx69978.468ENSGGOG00000016751DDX69978.675Gorilla_gorilla
ENSIPUG00000000616ddx69970.299ENSGGOG00000038856-9970.299Gorilla_gorilla
ENSIPUG00000000616ddx69963.983ENSGGOG00000023765-9963.983Gorilla_gorilla
ENSIPUG00000000616ddx69992.754ENSHBUG00000009651ddx69993.375Haplochromis_burtoni
ENSIPUG00000000616ddx69987.578ENSHGLG00000004316DDX69987.785Heterocephalus_glaber_female
ENSIPUG00000000616ddx69987.578ENSHGLG00100014595DDX69987.785Heterocephalus_glaber_male
ENSIPUG00000000616ddx69991.546ENSHCOG00000012451ddx69991.546Hippocampus_comes
ENSIPUG00000000616ddx69987.785ENSSTOG00000014475DDX69987.992Ictidomys_tridecemlineatus
ENSIPUG00000000616ddx69987.578ENSJJAG00000021630Ddx69987.785Jaculus_jaculus
ENSIPUG00000000616ddx69990.814ENSKMAG00000003546ddx69991.925Kryptolebias_marmoratus
ENSIPUG00000000616ddx69986.831ENSLBEG00000017823ddx69982.051Labrus_bergylta
ENSIPUG00000000616ddx69988.358ENSLACG00000017153DDX69988.565Latimeria_chalumnae
ENSIPUG00000000616ddx610092.577ENSLOCG00000000770ddx610092.577Lepisosteus_oculatus
ENSIPUG00000000616ddx69987.992ENSLAFG00000011012DDX69988.199Loxodonta_africana
ENSIPUG00000000616ddx69987.785ENSMFAG00000042472DDX69987.992Macaca_fascicularis
ENSIPUG00000000616ddx69987.785ENSMMUG00000018651DDX69987.992Macaca_mulatta
ENSIPUG00000000616ddx69964.195ENSMMUG00000047408-9964.407Macaca_mulatta
ENSIPUG00000000616ddx69987.785ENSMNEG00000033959DDX69987.992Macaca_nemestrina
ENSIPUG00000000616ddx69987.785ENSMLEG00000028151DDX69987.992Mandrillus_leucophaeus
ENSIPUG00000000616ddx69991.633ENSMAMG00000013732ddx69990.612Mastacembelus_armatus
ENSIPUG00000000616ddx69992.961ENSMZEG00005024098ddx69993.582Maylandia_zebra
ENSIPUG00000000616ddx69987.578ENSMGAG00000004123DDX69987.785Meleagris_gallopavo
ENSIPUG00000000616ddx69986.749ENSMAUG00000008886Ddx69986.957Mesocricetus_auratus
ENSIPUG00000000616ddx69987.578ENSMICG00000011519DDX69987.785Microcebus_murinus
ENSIPUG00000000616ddx69987.371ENSMOCG00000002068Ddx69987.578Microtus_ochrogaster
ENSIPUG00000000616ddx69992.873ENSMMOG00000001233ddx69992.873Mola_mola
ENSIPUG00000000616ddx69987.578ENSMODG00000013375DDX69987.785Monodelphis_domestica
ENSIPUG00000000616ddx69989.855ENSMALG00000009308ddx69989.855Monopterus_albus
ENSIPUG00000000616ddx69983.644MGP_CAROLIEiJ_G0032122Ddx69983.851Mus_caroli
ENSIPUG00000000616ddx69987.164ENSMUSG00000032097Ddx69987.578Mus_musculus
ENSIPUG00000000616ddx69986.957MGP_PahariEiJ_G0014991Ddx69987.371Mus_pahari
ENSIPUG00000000616ddx69987.578ENSMPUG00000004857DDX69987.785Mustela_putorius_furo
ENSIPUG00000000616ddx69987.578ENSMLUG00000003671DDX69987.785Myotis_lucifugus
ENSIPUG00000000616ddx69987.578ENSNGAG00000016848Ddx69987.785Nannospalax_galili
ENSIPUG00000000616ddx69983.644ENSNBRG00000003507ddx69984.265Neolamprologus_brichardi
ENSIPUG00000000616ddx69987.785ENSNLEG00000007372DDX69987.992Nomascus_leucogenys
ENSIPUG00000000616ddx69977.019ENSMEUG00000010556DDX69977.226Notamacropus_eugenii
ENSIPUG00000000616ddx68770.663ENSOPRG00000016112DDX610070.918Ochotona_princeps
ENSIPUG00000000616ddx69987.371ENSODEG00000007950DDX69987.578Octodon_degus
ENSIPUG00000000616ddx69993.582ENSONIG00000005756ddx69993.582Oreochromis_niloticus
ENSIPUG00000000616ddx69093.112ENSOANG00000003751DDX69893.112Ornithorhynchus_anatinus
ENSIPUG00000000616ddx69987.578ENSOCUG00000005849DDX69987.785Oryctolagus_cuniculus
ENSIPUG00000000616ddx69990.683ENSORLG00000002506ddx69990.167Oryzias_latipes
ENSIPUG00000000616ddx69990.890ENSORLG00020016534ddx69990.377Oryzias_latipes_hni
ENSIPUG00000000616ddx69990.683ENSORLG00015005301ddx69990.566Oryzias_latipes_hsok
ENSIPUG00000000616ddx69990.890ENSOMEG00000001347ddx69990.776Oryzias_melastigma
ENSIPUG00000000616ddx69987.578ENSOGAG00000007978DDX69987.785Otolemur_garnettii
ENSIPUG00000000616ddx69987.785ENSOARG00000011455DDX69987.992Ovis_aries
ENSIPUG00000000616ddx69963.347ENSPPAG00000039963-9963.559Pan_paniscus
ENSIPUG00000000616ddx69971.581ENSPPAG00000040387-9971.581Pan_paniscus
ENSIPUG00000000616ddx69987.785ENSPPAG00000034894DDX69987.992Pan_paniscus
ENSIPUG00000000616ddx69987.578ENSPPRG00000009039DDX69987.785Panthera_pardus
ENSIPUG00000000616ddx69987.578ENSPTIG00000018551DDX69987.785Panthera_tigris_altaica
ENSIPUG00000000616ddx69971.368ENSPTRG00000050136-9971.368Pan_troglodytes
ENSIPUG00000000616ddx69987.785ENSPTRG00000004353DDX69987.992Pan_troglodytes
ENSIPUG00000000616ddx69964.407ENSPTRG00000043896-9964.619Pan_troglodytes
ENSIPUG00000000616ddx69987.785ENSPANG00000018963DDX69987.992Papio_anubis
ENSIPUG00000000616ddx610093.802ENSPKIG00000013728ddx610093.802Paramormyrops_kingsleyae
ENSIPUG00000000616ddx69986.626ENSPSIG00000013230DDX69986.626Pelodiscus_sinensis
ENSIPUG00000000616ddx69987.751ENSPMGG00000023707ddx69987.751Periophthalmus_magnuspinnatus
ENSIPUG00000000616ddx69978.969ENSPMAG00000007168ddx69979.175Petromyzon_marinus
ENSIPUG00000000616ddx69991.718ENSPFOG00000010555ddx69991.718Poecilia_formosa
ENSIPUG00000000616ddx69991.718ENSPLAG00000019684ddx69991.718Poecilia_latipinna
ENSIPUG00000000616ddx69991.718ENSPMEG00000019775ddx69991.718Poecilia_mexicana
ENSIPUG00000000616ddx69991.304ENSPREG00000016082ddx69991.304Poecilia_reticulata
ENSIPUG00000000616ddx69985.093ENSPPYG00000003942DDX69985.300Pongo_abelii
ENSIPUG00000000616ddx69979.089ENSPCAG00000004767DDX69979.089Procavia_capensis
ENSIPUG00000000616ddx69987.578ENSPCOG00000020762DDX69987.785Propithecus_coquereli
ENSIPUG00000000616ddx69980.124ENSPVAG00000005421DDX69980.331Pteropus_vampyrus
ENSIPUG00000000616ddx69992.754ENSPNYG00000008538ddx69993.375Pundamilia_nyererei
ENSIPUG00000000616ddx69975.659ENSPNAG00000010102ddx69975.456Pygocentrus_nattereri
ENSIPUG00000000616ddx69987.578ENSRNOG00000053932Ddx69987.785Rattus_norvegicus
ENSIPUG00000000616ddx69987.785ENSRBIG00000032545DDX69987.992Rhinopithecus_bieti
ENSIPUG00000000616ddx69966.102ENSRBIG00000038129-9966.102Rhinopithecus_bieti
ENSIPUG00000000616ddx69961.864ENSRBIG00000027933-9962.076Rhinopithecus_bieti
ENSIPUG00000000616ddx69965.042ENSRROG00000034419-9965.254Rhinopithecus_roxellana
ENSIPUG00000000616ddx69966.102ENSRROG00000032664-9966.102Rhinopithecus_roxellana
ENSIPUG00000000616ddx69987.785ENSRROG00000032478DDX69987.992Rhinopithecus_roxellana
ENSIPUG00000000616ddx69987.578ENSSBOG00000029671DDX69987.785Saimiri_boliviensis_boliviensis
ENSIPUG00000000616ddx69987.578ENSSHAG00000011424DDX69987.785Sarcophilus_harrisii
ENSIPUG00000000616ddx69447.277ENSSFOG00015005998DDX69750.382Scleropages_formosus
ENSIPUG00000000616ddx610094.008ENSSFOG00015023211ddx610094.008Scleropages_formosus
ENSIPUG00000000616ddx69991.925ENSSMAG00000001253ddx69991.925Scophthalmus_maximus
ENSIPUG00000000616ddx69993.582ENSSDUG00000019695ddx69993.582Seriola_dumerili
ENSIPUG00000000616ddx69993.582ENSSLDG00000006167ddx69993.582Seriola_lalandi_dorsalis
ENSIPUG00000000616ddx69987.578ENSSARG00000003219DDX69987.785Sorex_araneus
ENSIPUG00000000616ddx68990.670ENSSPUG00000004404DDX69290.670Sphenodon_punctatus
ENSIPUG00000000616ddx69993.789ENSSPAG00000023258ddx69993.789Stegastes_partitus
ENSIPUG00000000616ddx69987.371ENSSSCG00000015097DDX69987.578Sus_scrofa
ENSIPUG00000000616ddx69586.957ENSTGUG00000017360DDX610087.174Taeniopygia_guttata
ENSIPUG00000000616ddx69992.547ENSTRUG00000011848ddx69992.547Takifugu_rubripes
ENSIPUG00000000616ddx69993.168ENSTNIG00000016295ddx69993.168Tetraodon_nigroviridis
ENSIPUG00000000616ddx69984.472ENSTTRG00000004313DDX69984.679Tursiops_truncatus
ENSIPUG00000000616ddx69987.578ENSUAMG00000027749DDX69987.785Ursus_americanus
ENSIPUG00000000616ddx69987.578ENSUMAG00000000993DDX69987.785Ursus_maritimus
ENSIPUG00000000616ddx69985.507ENSVPAG00000005601DDX69985.714Vicugna_pacos
ENSIPUG00000000616ddx69987.164ENSVVUG00000024121DDX69987.371Vulpes_vulpes
ENSIPUG00000000616ddx69987.734ENSXETG00000010061ddx69987.942Xenopus_tropicalis
ENSIPUG00000000616ddx69990.646ENSXCOG00000008560ddx69990.646Xiphophorus_couchianus
ENSIPUG00000000616ddx69991.304ENSXMAG00000007620ddx69991.304Xiphophorus_maculatus

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