EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000640 (Gene tree)
Gene ID: 108271979
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 14559 bases
Position: chr11:22782843-22797401
Accession: 108271979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000897	zf-RanBP	PF00641.18	1.7e-10	1	1
ENSIPUP00000000897	RRM_1	PF00076.22	1.2e-12	1	1
ENSIPUP00000000897	G-patch	PF01585.23	6.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000957	-	5606	XM_017480004	ENSIPUP00000000897	835 (aa)	XP_017335493	A0A2D0RYB4

Gene Model

Click here to download ENSIPUG00000000640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000640	rbm5	77	45.427	ENSIPUG00000014280	rbm10	91	45.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000640	rbm5	100	64.810	ENSG00000003756	RBM5	100	64.512	Homo_sapiens
ENSIPUG00000000640	rbm5	100	67.020	ENSAPOG00000006011	-	100	66.863	Acanthochromis_polyacanthus
ENSIPUG00000000640	rbm5	100	75.261	ENSAPOG00000016625	rbm5	100	74.913	Acanthochromis_polyacanthus
ENSIPUG00000000640	rbm5	100	64.573	ENSAMEG00000012005	RBM5	100	64.395	Ailuropoda_melanoleuca
ENSIPUG00000000640	rbm5	99	62.207	ENSACIG00000021310	-	99	60.094	Amphilophus_citrinellus
ENSIPUG00000000640	rbm5	66	80.593	ENSACIG00000007571	rbm5	97	80.054	Amphilophus_citrinellus
ENSIPUG00000000640	rbm5	100	75.491	ENSAOCG00000002880	rbm5	100	75.347	Amphiprion_ocellaris
ENSIPUG00000000640	rbm5	99	64.336	ENSAOCG00000017312	-	99	63.432	Amphiprion_ocellaris
ENSIPUG00000000640	rbm5	90	75.613	ENSAPEG00000011862	rbm5	92	75.581	Amphiprion_percula
ENSIPUG00000000640	rbm5	100	67.723	ENSAPEG00000018222	RBM5	100	66.706	Amphiprion_percula
ENSIPUG00000000640	rbm5	100	67.401	ENSATEG00000003838	-	100	66.202	Anabas_testudineus
ENSIPUG00000000640	rbm5	100	75.175	ENSATEG00000024663	rbm5	100	74.009	Anabas_testudineus
ENSIPUG00000000640	rbm5	92	66.074	ENSAPLG00000011176	RBM5	99	66.497	Anas_platyrhynchos
ENSIPUG00000000640	rbm5	100	62.529	ENSACAG00000008580	RBM5	100	62.877	Anolis_carolinensis
ENSIPUG00000000640	rbm5	100	64.699	ENSANAG00000025199	RBM5	100	64.235	Aotus_nancymaae
ENSIPUG00000000640	rbm5	100	75.408	ENSACLG00000012748	rbm5	100	75.291	Astatotilapia_calliptera
ENSIPUG00000000640	rbm5	89	80.488	ENSACLG00000024198	RBM5	98	80.952	Astatotilapia_calliptera
ENSIPUG00000000640	rbm5	84	87.571	ENSAMXG00000008146	rbm5	100	87.571	Astyanax_mexicanus
ENSIPUG00000000640	rbm5	100	64.336	ENSBTAG00000006330	RBM5	100	64.160	Bos_taurus
ENSIPUG00000000640	rbm5	100	64.664	ENSCJAG00000004740	RBM5	100	64.202	Callithrix_jacchus
ENSIPUG00000000640	rbm5	100	64.692	ENSCAFG00000010866	RBM5	100	64.512	Canis_familiaris
ENSIPUG00000000640	rbm5	100	64.692	ENSCAFG00020022126	RBM5	100	64.512	Canis_lupus_dingo
ENSIPUG00000000640	rbm5	100	64.455	ENSCHIG00000018435	RBM5	100	64.160	Capra_hircus
ENSIPUG00000000640	rbm5	86	62.927	ENSTSYG00000004158	RBM5	98	62.117	Carlito_syrichta
ENSIPUG00000000640	rbm5	100	52.370	ENSCAPG00000013495	RBM5	100	52.607	Cavia_aperea
ENSIPUG00000000640	rbm5	100	64.566	ENSCPOG00000008151	RBM5	100	64.269	Cavia_porcellus
ENSIPUG00000000640	rbm5	99	64.608	ENSCCAG00000026401	RBM5	100	63.529	Cebus_capucinus
ENSIPUG00000000640	rbm5	100	64.692	ENSCATG00000041038	RBM5	100	64.395	Cercocebus_atys
ENSIPUG00000000640	rbm5	100	64.650	ENSCLAG00000007873	RBM5	100	64.387	Chinchilla_lanigera
ENSIPUG00000000640	rbm5	100	64.692	ENSCSAG00000014401	RBM5	100	64.395	Chlorocebus_sabaeus
ENSIPUG00000000640	rbm5	81	57.879	ENSCHOG00000009429	RBM5	85	56.313	Choloepus_hoffmanni
ENSIPUG00000000640	rbm5	91	66.065	ENSCPBG00000002406	RBM5	100	64.953	Chrysemys_picta_bellii
ENSIPUG00000000640	rbm5	100	64.075	ENSCANG00000031250	RBM5	100	63.455	Colobus_angolensis_palliatus
ENSIPUG00000000640	rbm5	100	64.345	ENSCGRG00001010543	Rbm5	100	63.466	Cricetulus_griseus_chok1gshd
ENSIPUG00000000640	rbm5	100	64.345	ENSCGRG00000008475	Rbm5	100	63.466	Cricetulus_griseus_crigri
ENSIPUG00000000640	rbm5	98	71.944	ENSCSEG00000000596	rbm5	97	71.595	Cynoglossus_semilaevis
ENSIPUG00000000640	rbm5	100	73.341	ENSCVAG00000005655	rbm5	100	74.186	Cyprinodon_variegatus
ENSIPUG00000000640	rbm5	100	73.081	ENSDARG00000098280	rbm5	100	87.417	Danio_rerio
ENSIPUG00000000640	rbm5	100	65.047	ENSDNOG00000011756	RBM5	100	64.747	Dasypus_novemcinctus
ENSIPUG00000000640	rbm5	100	64.100	ENSDORG00000007692	Rbm5	100	64.118	Dipodomys_ordii
ENSIPUG00000000640	rbm5	91	62.725	ENSETEG00000012773	RBM5	93	62.069	Echinops_telfairi
ENSIPUG00000000640	rbm5	73	63.260	ENSEBUG00000017034	rbm5	78	62.707	Eptatretus_burgeri
ENSIPUG00000000640	rbm5	100	64.692	ENSEASG00005011835	RBM5	100	64.395	Equus_asinus_asinus
ENSIPUG00000000640	rbm5	100	64.692	ENSECAG00000020447	RBM5	100	64.395	Equus_caballus
ENSIPUG00000000640	rbm5	91	74.752	ENSEEUG00000005943	RBM5	87	74.752	Erinaceus_europaeus
ENSIPUG00000000640	rbm5	100	75.898	ENSELUG00000022467	rbm5	100	73.812	Esox_lucius
ENSIPUG00000000640	rbm5	100	64.218	ENSFCAG00000014639	RBM5	100	64.269	Felis_catus
ENSIPUG00000000640	rbm5	99	64.336	ENSFALG00000008828	RBM5	86	65.105	Ficedula_albicollis
ENSIPUG00000000640	rbm5	100	64.387	ENSFDAG00000001897	RBM5	100	64.109	Fukomys_damarensis
ENSIPUG00000000640	rbm5	92	92.857	ENSFHEG00000015954	rbm5	98	92.857	Fundulus_heteroclitus
ENSIPUG00000000640	rbm5	99	69.822	ENSGMOG00000016224	rbm5	100	70.059	Gadus_morhua
ENSIPUG00000000640	rbm5	100	51.651	ENSGMOG00000007810	-	100	51.418	Gadus_morhua
ENSIPUG00000000640	rbm5	99	64.379	ENSGALG00000039288	RBM5	86	65.686	Gallus_gallus
ENSIPUG00000000640	rbm5	100	73.757	ENSGAFG00000010690	rbm5	100	74.220	Gambusia_affinis
ENSIPUG00000000640	rbm5	100	63.753	ENSGACG00000000858	-	100	63.275	Gasterosteus_aculeatus
ENSIPUG00000000640	rbm5	100	73.113	ENSGACG00000010469	rbm5	100	73.068	Gasterosteus_aculeatus
ENSIPUG00000000640	rbm5	86	65.536	ENSGAGG00000007935	RBM5	99	64.303	Gopherus_agassizii
ENSIPUG00000000640	rbm5	100	64.692	ENSGGOG00000014490	RBM5	100	64.395	Gorilla_gorilla
ENSIPUG00000000640	rbm5	89	80.488	ENSHBUG00000011901	-	98	80.952	Haplochromis_burtoni
ENSIPUG00000000640	rbm5	100	74.566	ENSHBUG00000001941	rbm5	100	74.451	Haplochromis_burtoni
ENSIPUG00000000640	rbm5	100	64.573	ENSHGLG00000014844	RBM5	100	64.277	Heterocephalus_glaber_female
ENSIPUG00000000640	rbm5	100	64.685	ENSHGLG00100010739	RBM5	100	64.387	Heterocephalus_glaber_male
ENSIPUG00000000640	rbm5	96	71.358	ENSHCOG00000017110	rbm5	99	72.256	Hippocampus_comes
ENSIPUG00000000640	rbm5	100	57.508	ENSHCOG00000004536	-	100	56.195	Hippocampus_comes
ENSIPUG00000000640	rbm5	100	64.573	ENSSTOG00000013856	RBM5	100	64.277	Ictidomys_tridecemlineatus
ENSIPUG00000000640	rbm5	100	64.547	ENSJJAG00000008844	Rbm5	100	64.395	Jaculus_jaculus
ENSIPUG00000000640	rbm5	100	74.825	ENSKMAG00000006663	rbm5	100	74.709	Kryptolebias_marmoratus
ENSIPUG00000000640	rbm5	100	73.287	ENSLBEG00000020858	rbm5	100	73.605	Labrus_bergylta
ENSIPUG00000000640	rbm5	100	64.085	ENSLBEG00000010877	-	94	62.602	Labrus_bergylta
ENSIPUG00000000640	rbm5	57	69.205	ENSLBEG00000002522	-	83	70.504	Labrus_bergylta
ENSIPUG00000000640	rbm5	99	64.497	ENSLACG00000016572	RBM5	100	66.848	Latimeria_chalumnae
ENSIPUG00000000640	rbm5	100	71.591	ENSLOCG00000010774	rbm5	100	70.434	Lepisosteus_oculatus
ENSIPUG00000000640	rbm5	100	64.421	ENSLAFG00000006733	RBM5	100	64.713	Loxodonta_africana
ENSIPUG00000000640	rbm5	100	64.692	ENSMFAG00000031609	RBM5	100	64.395	Macaca_fascicularis
ENSIPUG00000000640	rbm5	99	64.601	ENSMMUG00000004921	RBM5	99	64.303	Macaca_mulatta
ENSIPUG00000000640	rbm5	100	64.810	ENSMNEG00000044394	RBM5	100	64.512	Macaca_nemestrina
ENSIPUG00000000640	rbm5	100	63.647	ENSMLEG00000034689	RBM5	100	63.325	Mandrillus_leucophaeus
ENSIPUG00000000640	rbm5	100	69.042	ENSMAMG00000023948	-	100	61.772	Mastacembelus_armatus
ENSIPUG00000000640	rbm5	91	95.238	ENSMAMG00000017277	rbm5	97	95.238	Mastacembelus_armatus
ENSIPUG00000000640	rbm5	100	63.689	ENSMZEG00005010035	-	100	63.531	Maylandia_zebra
ENSIPUG00000000640	rbm5	100	75.408	ENSMZEG00005015328	rbm5	100	75.291	Maylandia_zebra
ENSIPUG00000000640	rbm5	92	65.900	ENSMGAG00000003972	RBM5	100	66.752	Meleagris_gallopavo
ENSIPUG00000000640	rbm5	99	63.734	ENSMAUG00000020572	Rbm5	98	63.669	Mesocricetus_auratus
ENSIPUG00000000640	rbm5	100	64.782	ENSMICG00000016179	RBM5	100	64.512	Microcebus_murinus
ENSIPUG00000000640	rbm5	100	64.345	ENSMOCG00000017479	Rbm5	100	64.160	Microtus_ochrogaster
ENSIPUG00000000640	rbm5	97	69.242	ENSMMOG00000015342	rbm5	93	68.615	Mola_mola
ENSIPUG00000000640	rbm5	99	52.913	ENSMMOG00000021804	-	99	52.669	Mola_mola
ENSIPUG00000000640	rbm5	100	64.379	ENSMODG00000012301	RBM5	100	63.991	Monodelphis_domestica
ENSIPUG00000000640	rbm5	99	65.064	ENSMALG00000000609	rbm5	99	65.517	Monopterus_albus
ENSIPUG00000000640	rbm5	100	65.304	ENSMALG00000016769	-	100	64.761	Monopterus_albus
ENSIPUG00000000640	rbm5	100	62.901	MGP_CAROLIEiJ_G0032660	Rbm5	100	66.409	Mus_caroli
ENSIPUG00000000640	rbm5	100	63.020	ENSMUSG00000032580	Rbm5	100	66.409	Mus_musculus
ENSIPUG00000000640	rbm5	100	63.020	MGP_PahariEiJ_G0015528	Rbm5	100	66.409	Mus_pahari
ENSIPUG00000000640	rbm5	100	63.020	MGP_SPRETEiJ_G0033805	Rbm5	96	70.946	Mus_spretus
ENSIPUG00000000640	rbm5	100	64.852	ENSMLUG00000007875	RBM5	100	64.471	Myotis_lucifugus
ENSIPUG00000000640	rbm5	100	64.303	ENSNGAG00000011777	Rbm5	100	63.817	Nannospalax_galili
ENSIPUG00000000640	rbm5	97	61.796	ENSNBRG00000004400	RBM5	97	60.693	Neolamprologus_brichardi
ENSIPUG00000000640	rbm5	100	74.451	ENSNBRG00000018097	rbm5	100	74.335	Neolamprologus_brichardi
ENSIPUG00000000640	rbm5	100	64.573	ENSNLEG00000006943	RBM5	100	64.277	Nomascus_leucogenys
ENSIPUG00000000640	rbm5	99	59.714	ENSMEUG00000012994	RBM5	100	59.334	Notamacropus_eugenii
ENSIPUG00000000640	rbm5	91	63.233	ENSOPRG00000015154	RBM5	93	62.901	Ochotona_princeps
ENSIPUG00000000640	rbm5	100	62.278	ENSODEG00000019111	-	100	62.000	Octodon_degus
ENSIPUG00000000640	rbm5	100	64.650	ENSODEG00000016254	-	100	64.387	Octodon_degus
ENSIPUG00000000640	rbm5	100	65.233	ENSONIG00000019007	RBM5	100	64.843	Oreochromis_niloticus
ENSIPUG00000000640	rbm5	100	74.566	ENSONIG00000004107	rbm5	100	74.451	Oreochromis_niloticus
ENSIPUG00000000640	rbm5	87	64.682	ENSOANG00000006557	RBM5	100	63.563	Ornithorhynchus_anatinus
ENSIPUG00000000640	rbm5	100	64.100	ENSOCUG00000011652	RBM5	100	63.797	Oryctolagus_cuniculus
ENSIPUG00000000640	rbm5	100	59.016	ENSORLG00000001053	-	100	58.617	Oryzias_latipes
ENSIPUG00000000640	rbm5	95	72.817	ENSORLG00000003369	rbm5	99	72.079	Oryzias_latipes
ENSIPUG00000000640	rbm5	100	73.388	ENSORLG00020021744	rbm5	100	72.685	Oryzias_latipes_hni
ENSIPUG00000000640	rbm5	96	58.100	ENSORLG00020006782	-	98	57.509	Oryzias_latipes_hni
ENSIPUG00000000640	rbm5	91	90.476	ENSORLG00015018379	rbm5	97	90.476	Oryzias_latipes_hsok
ENSIPUG00000000640	rbm5	96	58.100	ENSORLG00015002854	-	98	57.528	Oryzias_latipes_hsok
ENSIPUG00000000640	rbm5	67	69.652	ENSOMEG00000010653	-	90	69.652	Oryzias_melastigma
ENSIPUG00000000640	rbm5	100	72.885	ENSOMEG00000002219	rbm5	100	72.538	Oryzias_melastigma
ENSIPUG00000000640	rbm5	92	63.380	ENSOGAG00000004205	RBM5	100	63.718	Otolemur_garnettii
ENSIPUG00000000640	rbm5	100	64.455	ENSOARG00000010923	RBM5	100	64.160	Ovis_aries
ENSIPUG00000000640	rbm5	100	64.692	ENSPPAG00000043010	RBM5	100	64.395	Pan_paniscus
ENSIPUG00000000640	rbm5	100	64.218	ENSPPRG00000005404	RBM5	100	64.269	Panthera_pardus
ENSIPUG00000000640	rbm5	100	64.218	ENSPTIG00000000962	RBM5	100	64.269	Panthera_tigris_altaica
ENSIPUG00000000640	rbm5	100	64.692	ENSPTRG00000014946	RBM5	100	64.395	Pan_troglodytes
ENSIPUG00000000640	rbm5	100	64.692	ENSPANG00000018507	RBM5	100	64.395	Papio_anubis
ENSIPUG00000000640	rbm5	76	58.679	ENSPKIG00000019187	-	100	57.910	Paramormyrops_kingsleyae
ENSIPUG00000000640	rbm5	100	71.281	ENSPKIG00000024837	RBM5	100	70.081	Paramormyrops_kingsleyae
ENSIPUG00000000640	rbm5	87	65.229	ENSPSIG00000016073	RBM5	100	64.507	Pelodiscus_sinensis
ENSIPUG00000000640	rbm5	88	82.051	ENSPMGG00000004719	-	97	80.952	Periophthalmus_magnuspinnatus
ENSIPUG00000000640	rbm5	78	61.826	ENSPMGG00000017347	rbm5	100	61.377	Periophthalmus_magnuspinnatus
ENSIPUG00000000640	rbm5	99	45.631	ENSPMAG00000001998	rbm5	99	44.503	Petromyzon_marinus
ENSIPUG00000000640	rbm5	100	64.142	ENSPCIG00000021531	RBM5	100	63.636	Phascolarctos_cinereus
ENSIPUG00000000640	rbm5	100	73.272	ENSPLAG00000006318	rbm5	100	73.903	Poecilia_latipinna
ENSIPUG00000000640	rbm5	73	69.171	ENSPMEG00000008651	rbm5	99	69.502	Poecilia_mexicana
ENSIPUG00000000640	rbm5	100	73.581	ENSPMEG00000004295	rbm5	100	74.392	Poecilia_mexicana
ENSIPUG00000000640	rbm5	100	73.587	ENSPREG00000003795	rbm5	100	74.164	Poecilia_reticulata
ENSIPUG00000000640	rbm5	54	66.667	ENSPCAG00000005459	RBM5	71	66.667	Procavia_capensis
ENSIPUG00000000640	rbm5	100	64.336	ENSPCOG00000025840	RBM5	100	64.235	Propithecus_coquereli
ENSIPUG00000000640	rbm5	100	62.102	ENSPVAG00000006812	RBM5	100	62.045	Pteropus_vampyrus
ENSIPUG00000000640	rbm5	100	74.682	ENSPNYG00000014787	rbm5	100	74.566	Pundamilia_nyererei
ENSIPUG00000000640	rbm5	83	65.782	ENSPNYG00000006361	RBM5	99	65.922	Pundamilia_nyererei
ENSIPUG00000000640	rbm5	100	89.455	ENSPNAG00000012070	rbm5	100	88.744	Pygocentrus_nattereri
ENSIPUG00000000640	rbm5	100	63.020	ENSRNOG00000018153	Rbm5	100	64.269	Rattus_norvegicus
ENSIPUG00000000640	rbm5	100	65.135	ENSRBIG00000012679	RBM5	100	64.630	Rhinopithecus_bieti
ENSIPUG00000000640	rbm5	100	65.135	ENSRROG00000041331	RBM5	100	64.630	Rhinopithecus_roxellana
ENSIPUG00000000640	rbm5	100	64.699	ENSSBOG00000006324	RBM5	100	64.235	Saimiri_boliviensis_boliviensis
ENSIPUG00000000640	rbm5	100	63.981	ENSSHAG00000018260	RBM5	100	63.872	Sarcophilus_harrisii
ENSIPUG00000000640	rbm5	100	69.919	ENSSFOG00015019645	-	100	69.849	Scleropages_formosus
ENSIPUG00000000640	rbm5	100	74.971	ENSSFOG00015019052	rbm5	94	74.971	Scleropages_formosus
ENSIPUG00000000640	rbm5	100	74.269	ENSSMAG00000017106	rbm5	100	74.152	Scophthalmus_maximus
ENSIPUG00000000640	rbm5	100	75.669	ENSSDUG00000019775	rbm5	100	75.641	Seriola_dumerili
ENSIPUG00000000640	rbm5	100	76.019	ENSSLDG00000002329	rbm5	100	74.825	Seriola_lalandi_dorsalis
ENSIPUG00000000640	rbm5	100	67.552	ENSSLDG00000015996	-	100	66.821	Seriola_lalandi_dorsalis
ENSIPUG00000000640	rbm5	63	77.922	ENSSARG00000009724	-	67	77.922	Sorex_araneus
ENSIPUG00000000640	rbm5	100	60.546	ENSSPUG00000001876	RBM5	89	61.782	Sphenodon_punctatus
ENSIPUG00000000640	rbm5	100	75.146	ENSSPAG00000019638	rbm5	100	74.709	Stegastes_partitus
ENSIPUG00000000640	rbm5	100	67.445	ENSSPAG00000020011	-	100	66.706	Stegastes_partitus
ENSIPUG00000000640	rbm5	92	76.190	ENSSSCG00000011395	RBM5	98	76.190	Sus_scrofa
ENSIPUG00000000640	rbm5	92	61.133	ENSTGUG00000006417	RBM5	99	60.973	Taeniopygia_guttata
ENSIPUG00000000640	rbm5	100	74.269	ENSTRUG00000008292	rbm5	100	73.086	Takifugu_rubripes
ENSIPUG00000000640	rbm5	99	55.371	ENSTNIG00000014742	rbm5	89	75.182	Tetraodon_nigroviridis
ENSIPUG00000000640	rbm5	100	59.123	ENSTBEG00000005424	RBM5	100	58.363	Tupaia_belangeri
ENSIPUG00000000640	rbm5	91	60.598	ENSTTRG00000007717	RBM5	100	58.914	Tursiops_truncatus
ENSIPUG00000000640	rbm5	100	64.573	ENSUAMG00000028347	RBM5	100	64.395	Ursus_americanus
ENSIPUG00000000640	rbm5	100	64.573	ENSUMAG00000022027	RBM5	100	64.395	Ursus_maritimus
ENSIPUG00000000640	rbm5	90	62.467	ENSVPAG00000009388	RBM5	100	62.159	Vicugna_pacos
ENSIPUG00000000640	rbm5	100	64.692	ENSVVUG00000028647	RBM5	100	64.512	Vulpes_vulpes
ENSIPUG00000000640	rbm5	100	73.241	ENSXMAG00000016369	rbm5	100	74.451	Xiphophorus_maculatus