EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000000673 (Gene tree)
Gene ID
108266847
Gene Symbol
-
Alias
-
Full Name
ribosomal RNA processing protein 1 homolog B-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
21828 bases
Position
chr6:17554194-17576021
Accession
108266847
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000000938Nop52PF05997.125.9e-6611
ENSIPUP00000000933Nop52PF05997.122.4e-6511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000000994-4301XM_017470645ENSIPUP000000009331115 (aa)XP_017326134A0A2D0R6D6
ENSIPUT00000000999-1714-ENSIPUP00000000938522 (aa)--
Gene Model
Click here to download ENSIPUG00000000673's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000673's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000000673-6745.143ENSG00000160214RRP17655.882Homo_sapiens
ENSIPUG00000000673-7344.591ENSG00000160208RRP1B6046.610Homo_sapiens
ENSIPUG00000000673-6946.389ENSAMEG00000011448RRP17546.556Ailuropoda_melanoleuca
ENSIPUG00000000673-7142.328ENSAMEG00000011401RRP1B5945.370Ailuropoda_melanoleuca
ENSIPUG00000000673-5755.034ENSACIG00000019121rrp15754.027Amphilophus_citrinellus
ENSIPUG00000000673-7953.995ENSAOCG00000017894-8173.770Amphiprion_ocellaris
ENSIPUG00000000673-7255.882ENSAPEG00000024150-5556.250Amphiprion_percula
ENSIPUG00000000673-7257.029ENSATEG00000005045-5057.923Anabas_testudineus
ENSIPUG00000000673-6547.507ENSAPLG00000004310RRP1B5847.432Anas_platyrhynchos
ENSIPUG00000000673-7247.074ENSACAG00000017851RRP1B6046.429Anolis_carolinensis
ENSIPUG00000000673-7343.272ENSANAG00000034889RRP1B5847.706Aotus_nancymaae
ENSIPUG00000000673-6645.640ENSANAG00000037815RRP17545.640Aotus_nancymaae
ENSIPUG00000000673-6744.444ENSBTAG00000017418RRP1B5948.598Bos_taurus
ENSIPUG00000000673-6743.143ENSBTAG00000003981RRP17443.266Bos_taurus
ENSIPUG00000000673-6744.444ENSCJAG00000043205RRP16945.014Callithrix_jacchus
ENSIPUG00000000673-7343.536ENSCJAG00000017077RRP1B5945.794Callithrix_jacchus
ENSIPUG00000000673-6945.556ENSCAFG00000010646RRP17545.055Canis_familiaris
ENSIPUG00000000673-6443.195ENSCAFG00000010621RRP1B5546.316Canis_familiaris
ENSIPUG00000000673-6745.892ENSCAFG00020018901RRP1B5946.316Canis_lupus_dingo
ENSIPUG00000000673-6945.556ENSCAFG00020018979RRP17545.055Canis_lupus_dingo
ENSIPUG00000000673-7141.444ENSCHIG00000020948RRP17445.014Capra_hircus
ENSIPUG00000000673-7342.969ENSCHIG00000021519RRP1B5950.000Capra_hircus
ENSIPUG00000000673-6742.222ENSTSYG00000012831RRP17641.667Carlito_syrichta
ENSIPUG00000000673-5943.210ENSCAPG00000008576RRP18042.500Cavia_aperea
ENSIPUG00000000673-6845.556ENSCPOG00000038986RRP17645.556Cavia_porcellus
ENSIPUG00000000673-6742.450ENSCPOG00000002396RRP1B6245.000Cavia_porcellus
ENSIPUG00000000673-6746.000ENSCCAG00000029828RRP17346.000Cebus_capucinus
ENSIPUG00000000673-7343.272ENSCCAG00000029384RRP1B5846.364Cebus_capucinus
ENSIPUG00000000673-6745.014ENSCATG00000015632RRP17345.714Cercocebus_atys
ENSIPUG00000000673-7344.855ENSCATG00000017423RRP1B6046.154Cercocebus_atys
ENSIPUG00000000673-6941.989ENSCLAG00000005622RRP1B5944.737Chinchilla_lanigera
ENSIPUG00000000673-6844.693ENSCLAG00000011639RRP17643.836Chinchilla_lanigera
ENSIPUG00000000673-6445.833ENSCSAG00000007936RRP19745.833Chlorocebus_sabaeus
ENSIPUG00000000673-7344.357ENSCSAG00000007961RRP1B6046.154Chlorocebus_sabaeus
ENSIPUG00000000673-7147.043ENSCPBG00000010310RRP1B5749.107Chrysemys_picta_bellii
ENSIPUG00000000673-5944.409ENSCANG00000042611RRP17044.872Colobus_angolensis_palliatus
ENSIPUG00000000673-7344.855ENSCANG00000040952RRP1B6047.009Colobus_angolensis_palliatus
ENSIPUG00000000673-6847.059ENSCGRG00001011920Rrp17746.479Cricetulus_griseus_chok1gshd
ENSIPUG00000000673-6742.857ENSCGRG00001010889-5848.485Cricetulus_griseus_chok1gshd
ENSIPUG00000000673-6742.737ENSCGRG00001023882-6257.746Cricetulus_griseus_chok1gshd
ENSIPUG00000000673-6141.667ENSCGRG00000001553Rrp1b5348.485Cricetulus_griseus_crigri
ENSIPUG00000000673-6847.059ENSCGRG00000008915Rrp17746.479Cricetulus_griseus_crigri
ENSIPUG00000000673-9246.850ENSCSEG00000020711-7456.980Cynoglossus_semilaevis
ENSIPUG00000000673-7652.868ENSCVAG00000017568-9054.301Cyprinodon_variegatus
ENSIPUG00000000673-6755.682ENSDARG00000103337rrp15954.321Danio_rerio
ENSIPUG00000000673-7343.229ENSDNOG00000032774RRP1B6245.429Dasypus_novemcinctus
ENSIPUG00000000673-7243.883ENSDNOG00000019880RRP17445.170Dasypus_novemcinctus
ENSIPUG00000000673-6041.905ENSDORG00000002104Rrp17442.284Dipodomys_ordii
ENSIPUG00000000673-5541.724ENSDORG00000005496Rrp1b5347.917Dipodomys_ordii
ENSIPUG00000000673-7340.992ENSETEG00000019489RRP1B5261.017Echinops_telfairi
ENSIPUG00000000673-6437.202ENSETEG00000002963-7136.735Echinops_telfairi
ENSIPUG00000000673-6745.429ENSEASG00005001673RRP17646.000Equus_asinus_asinus
ENSIPUG00000000673-7343.536ENSEASG00005001687RRP1B6146.296Equus_asinus_asinus
ENSIPUG00000000673-7343.272ENSECAG00000018018RRP1B6146.296Equus_caballus
ENSIPUG00000000673-7839.709ENSECAG00000015703RRP17647.143Equus_caballus
ENSIPUG00000000673-7754.237ENSELUG00000015885-9051.724Esox_lucius
ENSIPUG00000000673-7342.480ENSFCAG00000010272RRP1B5944.330Felis_catus
ENSIPUG00000000673-7242.706ENSFCAG00000008434RRP17445.070Felis_catus
ENSIPUG00000000673-5647.619ENSFALG00000002024RRP1B5846.602Ficedula_albicollis
ENSIPUG00000000673-6140.810ENSFDAG00000010899RRP1B5645.545Fukomys_damarensis
ENSIPUG00000000673-6844.847ENSFDAG00000013728RRP17645.833Fukomys_damarensis
ENSIPUG00000000673-7251.070ENSGMOG00000001953-6265.021Gadus_morhua
ENSIPUG00000000673-7448.705ENSGALG00000035696RRP1B6149.730Gallus_gallus
ENSIPUG00000000673-7254.011ENSGACG00000001438rrp17160.714Gasterosteus_aculeatus
ENSIPUG00000000673-7248.421ENSGAGG00000000375RRP1B6049.194Gopherus_agassizii
ENSIPUG00000000673-7344.591ENSGGOG00000012069RRP1B6046.610Gorilla_gorilla
ENSIPUG00000000673-6745.714ENSGGOG00000000173RRP17346.000Gorilla_gorilla
ENSIPUG00000000673-6846.927ENSHGLG00000017085RRP17245.902Heterocephalus_glaber_female
ENSIPUG00000000673-7241.470ENSHGLG00000004968RRP1B6342.735Heterocephalus_glaber_female
ENSIPUG00000000673-6336.826ENSHGLG00100002232RRP1B5442.735Heterocephalus_glaber_male
ENSIPUG00000000673-7646.575ENSHCOG00000018388-5457.000Hippocampus_comes
ENSIPUG00000000673-6644.638ENSSTOG00000011790RRP1B6343.243Ictidomys_tridecemlineatus
ENSIPUG00000000673-6745.739ENSSTOG00000011116RRP17544.759Ictidomys_tridecemlineatus
ENSIPUG00000000673-6945.304ENSJJAG00000018886Rrp17744.904Jaculus_jaculus
ENSIPUG00000000673-6638.571ENSJJAG00000021279Rrp1b6042.991Jaculus_jaculus
ENSIPUG00000000673-6759.104ENSKMAG00000005539rrp17157.983Kryptolebias_marmoratus
ENSIPUG00000000673-7054.178ENSLBEG00000021417RRP19054.348Labrus_bergylta
ENSIPUG00000000673-7543.147ENSLACG00000017332-6048.958Latimeria_chalumnae
ENSIPUG00000000673-7948.618ENSLOCG00000004064-6552.267Lepisosteus_oculatus
ENSIPUG00000000673-6744.759ENSLAFG00000022901RRP17743.258Loxodonta_africana
ENSIPUG00000000673-7343.194ENSLAFG00000000766RRP1B8443.935Loxodonta_africana
ENSIPUG00000000673-7344.271ENSMFAG00000039152RRP1B6046.154Macaca_fascicularis
ENSIPUG00000000673-6746.286ENSMFAG00000003202RRP17346.286Macaca_fascicularis
ENSIPUG00000000673-6745.714ENSMMUG00000012304RRP17345.714Macaca_mulatta
ENSIPUG00000000673-7344.855ENSMMUG00000000104RRP1B5552.632Macaca_mulatta
ENSIPUG00000000673-6745.714ENSMNEG00000031210RRP17345.714Macaca_nemestrina
ENSIPUG00000000673-7344.855ENSMNEG00000034269RRP1B6046.154Macaca_nemestrina
ENSIPUG00000000673-7142.162ENSMLEG00000040044RRP1B5846.154Mandrillus_leucophaeus
ENSIPUG00000000673-6145.141ENSMLEG00000037797RRP17245.141Mandrillus_leucophaeus
ENSIPUG00000000673-7448.705ENSMGAG00000014591RRP1B6150.000Meleagris_gallopavo
ENSIPUG00000000673-6838.592ENSMAUG00000017653Rrp17440.563Mesocricetus_auratus
ENSIPUG00000000673-6640.115ENSMAUG00000021508Rrp1b5848.485Mesocricetus_auratus
ENSIPUG00000000673-6745.676ENSMICG00000004700RRP17744.568Microcebus_murinus
ENSIPUG00000000673-7343.782ENSMICG00000004686RRP1B6146.667Microcebus_murinus
ENSIPUG00000000673-6737.989ENSMOCG00000001117Rrp1b5945.872Microtus_ochrogaster
ENSIPUG00000000673-7738.359ENSMOCG00000015687Rrp18342.188Microtus_ochrogaster
ENSIPUG00000000673-7247.668ENSMMOG00000019175rrp18948.257Mola_mola
ENSIPUG00000000673-7146.612ENSMODG00000021033RRP1B6346.757Monodelphis_domestica
ENSIPUG00000000673-6847.753ENSMODG00000021036-5147.753Monodelphis_domestica
ENSIPUG00000000673-7256.383ENSMALG00000010310rrp18856.780Monopterus_albus
ENSIPUG00000000673-6741.061MGP_CAROLIEiJ_G0021376Rrp1b6553.247Mus_caroli
ENSIPUG00000000673-6942.145MGP_CAROLIEiJ_G0015508Rrp18141.935Mus_caroli
ENSIPUG00000000673-6741.620ENSMUSG00000058392Rrp1b6553.247Mus_musculus
ENSIPUG00000000673-6150.775MGP_PahariEiJ_G0030921Rrp16352.362Mus_pahari
ENSIPUG00000000673-6742.017MGP_PahariEiJ_G0023695Rrp1b6553.247Mus_pahari
ENSIPUG00000000673-6742.179MGP_SPRETEiJ_G0022290Rrp1b6553.247Mus_spretus
ENSIPUG00000000673-7141.076ENSMPUG00000009826RRP17942.564Mustela_putorius_furo
ENSIPUG00000000673-7243.651ENSMLUG00000007738RRP1B6144.762Myotis_lucifugus
ENSIPUG00000000673-6052.941ENSMLUG00000017788RRP16452.459Myotis_lucifugus
ENSIPUG00000000673-8135.443ENSNGAG00000022344Rrp15348.016Nannospalax_galili
ENSIPUG00000000673-7340.106ENSNGAG00000021073Rrp1b6443.478Nannospalax_galili
ENSIPUG00000000673-6745.143ENSNLEG00000034734RRP17345.143Nomascus_leucogenys
ENSIPUG00000000673-7344.855ENSNLEG00000001490RRP1B6246.281Nomascus_leucogenys
ENSIPUG00000000673-5457.627ENSMEUG00000003226-5160.000Notamacropus_eugenii
ENSIPUG00000000673-6741.311ENSODEG00000013177RRP1B6147.917Octodon_degus
ENSIPUG00000000673-6351.964ENSONIG00000004264rrp15374.359Oreochromis_niloticus
ENSIPUG00000000673-6746.571ENSOANG00000006472-9943.127Ornithorhynchus_anatinus
ENSIPUG00000000673-7640.494ENSOANG00000006470RRP1B6047.619Ornithorhynchus_anatinus
ENSIPUG00000000673-5939.806ENSOCUG00000025931RRP1B5747.423Oryctolagus_cuniculus
ENSIPUG00000000673-7650.620ENSORLG00020007199-5163.768Oryzias_latipes_hni
ENSIPUG00000000673-7649.876ENSORLG00015004425-5161.386Oryzias_latipes_hsok
ENSIPUG00000000673-7850.739ENSOMEG00000016910-5261.194Oryzias_melastigma
ENSIPUG00000000673-6744.286ENSOGAG00000006105RRP17644.286Otolemur_garnettii
ENSIPUG00000000673-7042.318ENSOGAG00000009872RRP1B6363.333Otolemur_garnettii
ENSIPUG00000000673-6443.235ENSOARG00000011434RRP17245.401Ovis_aries
ENSIPUG00000000673-5944.337ENSOARG00000011314RRP1B5749.074Ovis_aries
ENSIPUG00000000673-8140.141ENSPPAG00000029050RRP17345.714Pan_paniscus
ENSIPUG00000000673-6543.491ENSPPAG00000035319RRP1B5646.610Pan_paniscus
ENSIPUG00000000673-7641.562ENSPPRG00000010356RRP1B7943.343Panthera_pardus
ENSIPUG00000000673-7442.708ENSPPRG00000010656RRP17545.352Panthera_pardus
ENSIPUG00000000673-6838.244ENSPTIG00000019473RRP16841.139Panthera_tigris_altaica
ENSIPUG00000000673-6839.266ENSPTIG00000016894RRP1B6544.330Panthera_tigris_altaica
ENSIPUG00000000673-7344.591ENSPTRG00000013958RRP1B6046.610Pan_troglodytes
ENSIPUG00000000673-6745.714ENSPTRG00000013962RRP17346.000Pan_troglodytes
ENSIPUG00000000673-7344.855ENSPANG00000011090RRP1B6046.154Papio_anubis
ENSIPUG00000000673-6745.014ENSPANG00000015097RRP17346.000Papio_anubis
ENSIPUG00000000673-7354.948ENSPKIG00000003422-6455.526Paramormyrops_kingsleyae
ENSIPUG00000000673-7347.895ENSPSIG00000008152RRP1B5749.020Pelodiscus_sinensis
ENSIPUG00000000673-7141.927ENSPMGG00000007512-8640.426Periophthalmus_magnuspinnatus
ENSIPUG00000000673-6940.533ENSPEMG00000022490Rrp1b6148.214Peromyscus_maniculatus_bairdii
ENSIPUG00000000673-7341.089ENSPEMG00000018421Rrp18144.134Peromyscus_maniculatus_bairdii
ENSIPUG00000000673-6847.899ENSPCIG00000015523-7547.339Phascolarctos_cinereus
ENSIPUG00000000673-7345.646ENSPCIG00000015513RRP1B6050.667Phascolarctos_cinereus
ENSIPUG00000000673-7551.759ENSPFOG00000007424-5761.538Poecilia_formosa
ENSIPUG00000000673-7652.228ENSPLAG00000016684-5055.163Poecilia_latipinna
ENSIPUG00000000673-7652.475ENSPMEG00000007042-5656.164Poecilia_mexicana
ENSIPUG00000000673-7750.360ENSPREG00000015673-5455.337Poecilia_reticulata
ENSIPUG00000000673-7344.855ENSPPYG00000011470RRP1B6046.281Pongo_abelii
ENSIPUG00000000673-6744.857ENSPPYG00000011474RRP17345.143Pongo_abelii
ENSIPUG00000000673-6745.531ENSPCOG00000017927RRP1B6146.018Propithecus_coquereli
ENSIPUG00000000673-6743.714ENSPCOG00000017706RRP17642.897Propithecus_coquereli
ENSIPUG00000000673-7266.755ENSPNAG00000007718-5769.492Pygocentrus_nattereri
ENSIPUG00000000673-6742.382ENSRNOG00000001194Rrp1b5945.045Rattus_norvegicus
ENSIPUG00000000673-6945.983ENSRNOG00000001203Rrp17845.983Rattus_norvegicus
ENSIPUG00000000673-6746.000ENSRBIG00000032082RRP17346.439Rhinopithecus_bieti
ENSIPUG00000000673-6641.983ENSRBIG00000041689RRP1B5845.455Rhinopithecus_bieti
ENSIPUG00000000673-7344.855ENSRROG00000031499RRP1B6045.584Rhinopithecus_roxellana
ENSIPUG00000000673-6746.286ENSRROG00000039799RRP17346.439Rhinopithecus_roxellana
ENSIPUG00000000673-6744.068ENSSBOG00000034689RRP17343.785Saimiri_boliviensis_boliviensis
ENSIPUG00000000673-6541.690ENSSBOG00000034727RRP1B5746.789Saimiri_boliviensis_boliviensis
ENSIPUG00000000673-7146.883ENSSHAG00000017789RRP1B6347.425Sarcophilus_harrisii
ENSIPUG00000000673-6045.938ENSSHAG00000010304-9144.904Sarcophilus_harrisii
ENSIPUG00000000673-6449.280ENSSFOG00015003932-5554.545Scleropages_formosus
ENSIPUG00000000673-7654.660ENSSMAG00000016847-8955.376Scophthalmus_maximus
ENSIPUG00000000673-7255.643ENSSDUG00000000551-6856.522Seriola_dumerili
ENSIPUG00000000673-7256.614ENSSLDG00000002538-5856.250Seriola_lalandi_dorsalis
ENSIPUG00000000673-5737.793ENSSARG00000003108-5748.624Sorex_araneus
ENSIPUG00000000673-6846.594ENSSPUG00000002834RRP1B6146.721Sphenodon_punctatus
ENSIPUG00000000673-7541.117ENSSSCG00000021698RRP1B5963.333Sus_scrofa
ENSIPUG00000000673-6844.258ENSSSCG00000037061RRP17444.011Sus_scrofa
ENSIPUG00000000673-6349.541ENSTGUG00000005926RRP1B5949.387Taeniopygia_guttata
ENSIPUG00000000673-6758.192ENSTRUG00000017592rrp19657.865Takifugu_rubripes
ENSIPUG00000000673-7152.406ENSTNIG00000005053rrp17553.083Tetraodon_nigroviridis
ENSIPUG00000000673-6741.417ENSTBEG00000000422RRP1B5858.537Tupaia_belangeri
ENSIPUG00000000673-6644.023ENSTTRG00000000723RRP1B5843.642Tursiops_truncatus
ENSIPUG00000000673-6844.944ENSUAMG00000026765RRP1B6445.714Ursus_americanus
ENSIPUG00000000673-6044.089ENSUMAG00000025510RRP1B7745.545Ursus_maritimus
ENSIPUG00000000673-6145.253ENSUMAG00000025507RRP17142.282Ursus_maritimus
ENSIPUG00000000673-5943.042ENSVVUG00000024509RRP1B5546.316Vulpes_vulpes
ENSIPUG00000000673-6645.245ENSXETG00000013683rrp1b6644.126Xenopus_tropicalis
ENSIPUG00000000673-7551.605ENSXMAG00000023123-5272.727Xiphophorus_maculatus

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