EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000767 (Gene tree)
Gene ID: 108273996
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7514 bases
Position: chr13:16064324-16071837
Accession: 108273996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001068	SAP	PF02037.27	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001133	-	3084	XM_017483743	ENSIPUP00000001068	609 (aa)	XP_017339232	A0A2D0S923

Gene Model

Click here to download ENSIPUG00000000767's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000767	xrcc6	96	57.167	ENSG00000196419	XRCC6	97	57.038	Homo_sapiens
ENSIPUG00000000767	xrcc6	99	75.453	ENSAPOG00000012704	xrcc6	99	75.453	Acanthochromis_polyacanthus
ENSIPUG00000000767	xrcc6	99	77.467	ENSACIG00000021277	xrcc6	99	77.340	Amphilophus_citrinellus
ENSIPUG00000000767	xrcc6	99	76.480	ENSAOCG00000021344	xrcc6	99	76.480	Amphiprion_ocellaris
ENSIPUG00000000767	xrcc6	99	76.974	ENSAPEG00000020712	xrcc6	99	76.974	Amphiprion_percula
ENSIPUG00000000767	xrcc6	99	76.190	ENSATEG00000007119	xrcc6	99	76.190	Anabas_testudineus
ENSIPUG00000000767	xrcc6	90	61.232	ENSAPLG00000004469	XRCC6	99	61.232	Anas_platyrhynchos
ENSIPUG00000000767	xrcc6	96	49.324	ENSANAG00000023445	-	94	53.023	Aotus_nancymaae
ENSIPUG00000000767	xrcc6	96	50.683	ENSANAG00000035230	-	96	51.009	Aotus_nancymaae
ENSIPUG00000000767	xrcc6	96	57.265	ENSANAG00000018684	XRCC6	98	57.117	Aotus_nancymaae
ENSIPUG00000000767	xrcc6	99	49.671	ENSANAG00000020017	-	91	57.561	Aotus_nancymaae
ENSIPUG00000000767	xrcc6	99	75.822	ENSACLG00000018608	xrcc6	99	75.698	Astatotilapia_calliptera
ENSIPUG00000000767	xrcc6	99	87.521	ENSAMXG00000007545	xrcc6	100	87.521	Astyanax_mexicanus
ENSIPUG00000000767	xrcc6	96	57.167	ENSCJAG00000045512	XRCC6	97	57.221	Callithrix_jacchus
ENSIPUG00000000767	xrcc6	100	55.537	ENSTSYG00000011348	XRCC6	99	55.537	Carlito_syrichta
ENSIPUG00000000767	xrcc6	99	53.431	ENSCCAG00000030041	-	95	53.431	Cebus_capucinus
ENSIPUG00000000767	xrcc6	84	60.000	ENSCCAG00000030468	-	96	60.000	Cebus_capucinus
ENSIPUG00000000767	xrcc6	96	46.508	ENSCCAG00000035711	-	98	45.471	Cebus_capucinus
ENSIPUG00000000767	xrcc6	96	47.440	ENSCCAG00000037663	-	97	46.217	Cebus_capucinus
ENSIPUG00000000767	xrcc6	96	57.607	ENSCATG00000042366	XRCC6	98	57.607	Cercocebus_atys
ENSIPUG00000000767	xrcc6	100	56.607	ENSCLAG00000016669	XRCC6	96	57.313	Chinchilla_lanigera
ENSIPUG00000000767	xrcc6	96	57.509	ENSCSAG00000005784	XRCC6	95	57.509	Chlorocebus_sabaeus
ENSIPUG00000000767	xrcc6	96	61.565	ENSCPBG00000020535	XRCC6	99	61.011	Chrysemys_picta_bellii
ENSIPUG00000000767	xrcc6	98	34.328	ENSCING00000000633	-	96	34.407	Ciona_intestinalis
ENSIPUG00000000767	xrcc6	96	57.607	ENSCANG00000031032	XRCC6	99	56.859	Colobus_angolensis_palliatus
ENSIPUG00000000767	xrcc6	96	51.701	ENSCGRG00001019029	Xrcc6	96	51.701	Cricetulus_griseus_chok1gshd
ENSIPUG00000000767	xrcc6	96	57.143	ENSCGRG00000001528	Xrcc6	96	57.143	Cricetulus_griseus_crigri
ENSIPUG00000000767	xrcc6	99	73.026	ENSCSEG00000020434	xrcc6	99	72.906	Cynoglossus_semilaevis
ENSIPUG00000000767	xrcc6	99	75.987	ENSCVAG00000002189	xrcc6	99	75.987	Cyprinodon_variegatus
ENSIPUG00000000767	xrcc6	100	80.984	ENSDARG00000071551	xrcc6	100	80.984	Danio_rerio
ENSIPUG00000000767	xrcc6	67	53.041	ENSETEG00000015333	-	67	53.041	Echinops_telfairi
ENSIPUG00000000767	xrcc6	96	55.726	ENSEASG00005001514	XRCC6	96	55.782	Equus_asinus_asinus
ENSIPUG00000000767	xrcc6	96	55.556	ENSECAG00000017563	XRCC6	99	54.850	Equus_caballus
ENSIPUG00000000767	xrcc6	99	75.534	ENSELUG00000020301	xrcc6	99	75.534	Esox_lucius
ENSIPUG00000000767	xrcc6	95	60.554	ENSFALG00000011908	XRCC6	92	60.034	Ficedula_albicollis
ENSIPUG00000000767	xrcc6	99	75.000	ENSFHEG00000016833	xrcc6	99	75.658	Fundulus_heteroclitus
ENSIPUG00000000767	xrcc6	89	73.745	ENSGMOG00000013524	xrcc6	89	73.359	Gadus_morhua
ENSIPUG00000000767	xrcc6	99	60.130	ENSGALG00000011932	XRCC6	99	60.292	Gallus_gallus
ENSIPUG00000000767	xrcc6	99	73.355	ENSGAFG00000008130	xrcc6	99	73.355	Gambusia_affinis
ENSIPUG00000000767	xrcc6	100	73.659	ENSGACG00000004868	xrcc6	99	73.171	Gasterosteus_aculeatus
ENSIPUG00000000767	xrcc6	96	61.395	ENSGAGG00000017518	XRCC6	99	60.848	Gopherus_agassizii
ENSIPUG00000000767	xrcc6	96	57.290	ENSGGOG00000015885	XRCC6	96	60.088	Gorilla_gorilla
ENSIPUG00000000767	xrcc6	93	76.596	ENSHBUG00000023281	xrcc6	99	76.596	Haplochromis_burtoni
ENSIPUG00000000767	xrcc6	100	55.556	ENSHGLG00000018078	XRCC6	96	56.463	Heterocephalus_glaber_female
ENSIPUG00000000767	xrcc6	100	55.556	ENSHGLG00100011264	XRCC6	96	56.463	Heterocephalus_glaber_male
ENSIPUG00000000767	xrcc6	99	71.429	ENSHCOG00000009821	xrcc6	99	71.429	Hippocampus_comes
ENSIPUG00000000767	xrcc6	96	57.483	ENSSTOG00000009490	XRCC6	96	57.483	Ictidomys_tridecemlineatus
ENSIPUG00000000767	xrcc6	96	52.381	ENSJJAG00000017136	Xrcc6	96	53.401	Jaculus_jaculus
ENSIPUG00000000767	xrcc6	99	76.316	ENSKMAG00000002141	xrcc6	99	76.316	Kryptolebias_marmoratus
ENSIPUG00000000767	xrcc6	99	75.041	ENSLBEG00000002691	xrcc6	99	75.041	Labrus_bergylta
ENSIPUG00000000767	xrcc6	86	73.077	ENSLOCG00000011533	xrcc6	99	73.077	Lepisosteus_oculatus
ENSIPUG00000000767	xrcc6	99	56.739	ENSMFAG00000003352	XRCC6	95	60.930	Macaca_fascicularis
ENSIPUG00000000767	xrcc6	96	57.509	ENSMMUG00000001856	XRCC6	97	57.404	Macaca_mulatta
ENSIPUG00000000767	xrcc6	97	57.264	ENSMNEG00000035076	XRCC6	98	57.377	Macaca_nemestrina
ENSIPUG00000000767	xrcc6	96	57.534	ENSMLEG00000019869	XRCC6	97	57.404	Mandrillus_leucophaeus
ENSIPUG00000000767	xrcc6	99	73.235	ENSMAMG00000003368	xrcc6	99	73.235	Mastacembelus_armatus
ENSIPUG00000000767	xrcc6	96	73.720	ENSMAMG00000003405	xrcc6	97	73.720	Mastacembelus_armatus
ENSIPUG00000000767	xrcc6	99	75.822	ENSMZEG00005028080	xrcc6	99	75.698	Maylandia_zebra
ENSIPUG00000000767	xrcc6	99	60.454	ENSMGAG00000012146	XRCC6	99	60.616	Meleagris_gallopavo
ENSIPUG00000000767	xrcc6	96	56.973	ENSMAUG00000017340	Xrcc6	96	56.973	Mesocricetus_auratus
ENSIPUG00000000767	xrcc6	100	56.373	ENSMOCG00000015717	Xrcc6	96	57.653	Microtus_ochrogaster
ENSIPUG00000000767	xrcc6	99	73.399	ENSMMOG00000003536	xrcc6	99	73.026	Mola_mola
ENSIPUG00000000767	xrcc6	99	75.205	ENSMALG00000013912	xrcc6	95	75.205	Monopterus_albus
ENSIPUG00000000767	xrcc6	100	52.451	MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.614	Mus_caroli
ENSIPUG00000000767	xrcc6	100	56.209	ENSMUSG00000022471	Xrcc6	99	60.377	Mus_musculus
ENSIPUG00000000767	xrcc6	100	56.209	MGP_PahariEiJ_G0020069	Xrcc6	99	56.373	Mus_pahari
ENSIPUG00000000767	xrcc6	96	58.020	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.020	Mus_spretus
ENSIPUG00000000767	xrcc6	96	56.122	ENSNGAG00000013750	Xrcc6	96	56.122	Nannospalax_galili
ENSIPUG00000000767	xrcc6	99	76.151	ENSNBRG00000004125	xrcc6	99	76.026	Neolamprologus_brichardi
ENSIPUG00000000767	xrcc6	95	58.348	ENSOPRG00000002386	XRCC6	99	58.348	Ochotona_princeps
ENSIPUG00000000767	xrcc6	96	57.313	ENSODEG00000015847	XRCC6	96	57.313	Octodon_degus
ENSIPUG00000000767	xrcc6	99	75.164	ENSONIG00000019715	xrcc6	99	75.164	Oreochromis_niloticus
ENSIPUG00000000767	xrcc6	68	60.192	ENSOANG00000011328	XRCC6	99	60.192	Ornithorhynchus_anatinus
ENSIPUG00000000767	xrcc6	95	57.586	ENSOCUG00000006948	XRCC6	95	57.633	Oryctolagus_cuniculus
ENSIPUG00000000767	xrcc6	99	76.683	ENSORLG00020007820	xrcc6	99	76.683	Oryzias_latipes_hni
ENSIPUG00000000767	xrcc6	99	76.683	ENSORLG00015006406	xrcc6	99	76.683	Oryzias_latipes_hsok
ENSIPUG00000000767	xrcc6	99	77.340	ENSOMEG00000008998	xrcc6	99	77.340	Oryzias_melastigma
ENSIPUG00000000767	xrcc6	96	56.293	ENSOGAG00000008821	XRCC6	96	56.293	Otolemur_garnettii
ENSIPUG00000000767	xrcc6	88	57.766	ENSPPAG00000037167	XRCC6	97	57.766	Pan_paniscus
ENSIPUG00000000767	xrcc6	96	57.265	ENSPTRG00000022548	XRCC6	99	57.265	Pan_troglodytes
ENSIPUG00000000767	xrcc6	96	57.265	ENSPTRG00000045824	XRCC6	99	57.265	Pan_troglodytes
ENSIPUG00000000767	xrcc6	97	57.095	ENSPANG00000001252	XRCC6	99	59.914	Papio_anubis
ENSIPUG00000000767	xrcc6	100	77.049	ENSPKIG00000003974	xrcc6	100	77.049	Paramormyrops_kingsleyae
ENSIPUG00000000767	xrcc6	99	72.712	ENSPMGG00000014220	xrcc6	100	73.422	Periophthalmus_magnuspinnatus
ENSIPUG00000000767	xrcc6	96	56.973	ENSPEMG00000023446	Xrcc6	96	56.973	Peromyscus_maniculatus_bairdii
ENSIPUG00000000767	xrcc6	99	58.155	ENSPCIG00000026409	XRCC6	95	59.208	Phascolarctos_cinereus
ENSIPUG00000000767	xrcc6	99	74.713	ENSPFOG00000017173	xrcc6	99	75.822	Poecilia_formosa
ENSIPUG00000000767	xrcc6	99	74.507	ENSPLAG00000000562	xrcc6	99	75.493	Poecilia_latipinna
ENSIPUG00000000767	xrcc6	99	74.836	ENSPMEG00000018478	xrcc6	99	75.658	Poecilia_mexicana
ENSIPUG00000000767	xrcc6	99	75.614	ENSPREG00000020957	xrcc6	93	75.614	Poecilia_reticulata
ENSIPUG00000000767	xrcc6	96	51.195	ENSPPYG00000011876	XRCC6	95	51.195	Pongo_abelii
ENSIPUG00000000767	xrcc6	100	55.065	ENSPVAG00000001168	XRCC6	99	55.065	Pteropus_vampyrus
ENSIPUG00000000767	xrcc6	99	75.658	ENSPNYG00000003815	xrcc6	99	72.144	Pundamilia_nyererei
ENSIPUG00000000767	xrcc6	100	56.046	ENSRNOG00000006392	Xrcc6	96	57.411	Rattus_norvegicus
ENSIPUG00000000767	xrcc6	96	53.516	ENSRBIG00000039794	XRCC6	99	53.516	Rhinopithecus_bieti
ENSIPUG00000000767	xrcc6	98	56.879	ENSRROG00000030297	XRCC6	99	57.203	Rhinopithecus_roxellana
ENSIPUG00000000767	xrcc6	67	50.856	ENSSBOG00000024724	-	99	50.856	Saimiri_boliviensis_boliviensis
ENSIPUG00000000767	xrcc6	96	56.293	ENSSHAG00000010790	XRCC6	96	56.293	Sarcophilus_harrisii
ENSIPUG00000000767	xrcc6	100	78.033	ENSSFOG00015014409	xrcc6	100	78.033	Scleropages_formosus
ENSIPUG00000000767	xrcc6	99	77.467	ENSSMAG00000006496	xrcc6	99	77.340	Scophthalmus_maximus
ENSIPUG00000000767	xrcc6	99	76.809	ENSSDUG00000007542	xrcc6	99	76.683	Seriola_dumerili
ENSIPUG00000000767	xrcc6	99	76.026	ENSSLDG00000009974	xrcc6	99	76.026	Seriola_lalandi_dorsalis
ENSIPUG00000000767	xrcc6	100	60.685	ENSSPUG00000012086	XRCC6	99	60.359	Sphenodon_punctatus
ENSIPUG00000000767	xrcc6	99	77.668	ENSSPAG00000015199	xrcc6	99	77.668	Stegastes_partitus
ENSIPUG00000000767	xrcc6	96	60.951	ENSTGUG00000009852	-	95	61.368	Taeniopygia_guttata
ENSIPUG00000000767	xrcc6	99	70.181	ENSTRUG00000017070	xrcc6	99	70.181	Takifugu_rubripes
ENSIPUG00000000767	xrcc6	96	71.138	ENSTNIG00000012947	xrcc6	99	71.138	Tetraodon_nigroviridis
ENSIPUG00000000767	xrcc6	96	53.082	ENSTBEG00000011736	XRCC6	99	53.082	Tupaia_belangeri
ENSIPUG00000000767	xrcc6	96	46.325	ENSTTRG00000006749	XRCC6	96	46.259	Tursiops_truncatus
ENSIPUG00000000767	xrcc6	99	75.369	ENSXMAG00000009691	xrcc6	99	76.190	Xiphophorus_maculatus