EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000789 (Gene tree)
Gene ID: 108271309
Gene Symbol: polrmt
Alias: si:dkey-21e2.1|si:dkeyp-74c5.5|wu:fb73g10
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 55349 bases
Position: chr10:17303130-17358478
Accession: 108271309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001156	RNA_pol	PF00940.19	5.6e-167	1	1
ENSIPUP00000001172	RNA_pol	PF00940.19	1.2e-160	1	1
ENSIPUP00000001179	RNA_pol	PF00940.19	3.5e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001247	-	3775	-	ENSIPUP00000001179	1201 (aa)	-	-
ENSIPUT00000001224	-	4912	XM_017478809	ENSIPUP00000001156	1302 (aa)	XP_017334298	A0A2D0RUX0
ENSIPUT00000001240	-	3585	-	ENSIPUP00000001172	1194 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000000789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000789	polrmt	96	47.419	ENSG00000099821	POLRMT	97	47.577	Homo_sapiens
ENSIPUG00000000789	polrmt	100	64.804	ENSAPOG00000003942	polrmt	100	63.827	Acanthochromis_polyacanthus
ENSIPUG00000000789	polrmt	96	48.687	ENSAMEG00000002745	POLRMT	83	54.219	Ailuropoda_melanoleuca
ENSIPUG00000000789	polrmt	99	66.694	ENSACIG00000016078	polrmt	100	66.667	Amphilophus_citrinellus
ENSIPUG00000000789	polrmt	98	67.481	ENSAOCG00000020208	polrmt	100	64.143	Amphiprion_ocellaris
ENSIPUG00000000789	polrmt	100	64.869	ENSAPEG00000007949	polrmt	100	64.143	Amphiprion_percula
ENSIPUG00000000789	polrmt	100	65.977	ENSATEG00000024025	polrmt	100	64.798	Anabas_testudineus
ENSIPUG00000000789	polrmt	84	58.140	ENSAPLG00000003051	POLRMT	99	58.977	Anas_platyrhynchos
ENSIPUG00000000789	polrmt	96	46.434	ENSANAG00000032916	POLRMT	97	46.434	Aotus_nancymaae
ENSIPUG00000000789	polrmt	100	64.354	ENSACLG00000003766	polrmt	100	63.949	Astatotilapia_calliptera
ENSIPUG00000000789	polrmt	96	81.988	ENSAMXG00000018258	polrmt	100	81.988	Astyanax_mexicanus
ENSIPUG00000000789	polrmt	97	48.160	ENSBTAG00000015051	POLRMT	98	47.809	Bos_taurus
ENSIPUG00000000789	polrmt	96	46.429	ENSCJAG00000012913	POLRMT	97	46.105	Callithrix_jacchus
ENSIPUG00000000789	polrmt	95	48.761	ENSCAFG00000019711	POLRMT	97	48.565	Canis_familiaris
ENSIPUG00000000789	polrmt	95	48.761	ENSCAFG00020016843	POLRMT	97	48.565	Canis_lupus_dingo
ENSIPUG00000000789	polrmt	97	47.496	ENSCHIG00000013267	POLRMT	95	48.049	Capra_hircus
ENSIPUG00000000789	polrmt	81	58.915	ENSCAPG00000016900	POLRMT	89	58.915	Cavia_aperea
ENSIPUG00000000789	polrmt	95	44.855	ENSCPOG00000023061	POLRMT	96	45.177	Cavia_porcellus
ENSIPUG00000000789	polrmt	96	46.324	ENSCCAG00000025014	POLRMT	97	46.324	Cebus_capucinus
ENSIPUG00000000789	polrmt	96	46.858	ENSCATG00000040393	POLRMT	97	46.858	Cercocebus_atys
ENSIPUG00000000789	polrmt	98	46.078	ENSCLAG00000007473	POLRMT	84	46.569	Chinchilla_lanigera
ENSIPUG00000000789	polrmt	96	46.375	ENSCSAG00000012942	POLRMT	97	46.375	Chlorocebus_sabaeus
ENSIPUG00000000789	polrmt	97	61.219	ENSCPBG00000009869	POLRMT	100	61.219	Chrysemys_picta_bellii
ENSIPUG00000000789	polrmt	66	44.200	ENSCSAVG00000000440	-	99	44.200	Ciona_savignyi
ENSIPUG00000000789	polrmt	96	46.227	ENSCANG00000038011	POLRMT	97	46.227	Colobus_angolensis_palliatus
ENSIPUG00000000789	polrmt	93	61.146	ENSCGRG00001021311	Polrmt	98	61.844	Cricetulus_griseus_chok1gshd
ENSIPUG00000000789	polrmt	96	47.660	ENSCGRG00000011134	Polrmt	98	45.669	Cricetulus_griseus_crigri
ENSIPUG00000000789	polrmt	100	56.688	ENSCSEG00000002734	polrmt	100	56.175	Cynoglossus_semilaevis
ENSIPUG00000000789	polrmt	100	65.997	ENSCVAG00000005949	polrmt	100	65.090	Cyprinodon_variegatus
ENSIPUG00000000789	polrmt	100	65.753	ENSDARG00000101220	polrmt	100	65.677	Danio_rerio
ENSIPUG00000000789	polrmt	78	65.986	ENSDORG00000014125	Polrmt	83	64.251	Dipodomys_ordii
ENSIPUG00000000789	polrmt	84	43.797	FBgn0261938	mtRNApol	77	43.944	Drosophila_melanogaster
ENSIPUG00000000789	polrmt	100	45.693	ENSETEG00000003476	POLRMT	95	46.478	Echinops_telfairi
ENSIPUG00000000789	polrmt	74	54.054	ENSEBUG00000013453	-	99	53.929	Eptatretus_burgeri
ENSIPUG00000000789	polrmt	100	48.282	ENSEASG00005021493	POLRMT	98	48.779	Equus_asinus_asinus
ENSIPUG00000000789	polrmt	100	47.954	ENSECAG00000032711	POLRMT	98	48.382	Equus_caballus
ENSIPUG00000000789	polrmt	100	64.763	ENSELUG00000019319	polrmt	100	64.771	Esox_lucius
ENSIPUG00000000789	polrmt	100	48.236	ENSFCAG00000018808	POLRMT	98	48.339	Felis_catus
ENSIPUG00000000789	polrmt	90	52.757	ENSFALG00000013910	POLRMT	98	52.849	Ficedula_albicollis
ENSIPUG00000000789	polrmt	99	44.409	ENSFDAG00000020312	POLRMT	97	44.857	Fukomys_damarensis
ENSIPUG00000000789	polrmt	99	63.933	ENSFHEG00000021239	polrmt	99	66.837	Fundulus_heteroclitus
ENSIPUG00000000789	polrmt	100	58.733	ENSGMOG00000011829	polrmt	100	59.887	Gadus_morhua
ENSIPUG00000000789	polrmt	96	54.928	ENSGALG00000001377	POLRMT	98	54.980	Gallus_gallus
ENSIPUG00000000789	polrmt	100	64.200	ENSGAFG00000003953	polrmt	100	63.102	Gambusia_affinis
ENSIPUG00000000789	polrmt	100	62.756	ENSGACG00000012957	polrmt	100	64.029	Gasterosteus_aculeatus
ENSIPUG00000000789	polrmt	100	59.983	ENSGAGG00000005522	POLRMT	90	66.830	Gopherus_agassizii
ENSIPUG00000000789	polrmt	74	69.375	ENSGGOG00000023264	-	83	69.565	Gorilla_gorilla
ENSIPUG00000000789	polrmt	100	64.137	ENSHBUG00000010005	polrmt	100	63.426	Haplochromis_burtoni
ENSIPUG00000000789	polrmt	97	44.579	ENSHGLG00000019286	POLRMT	98	44.958	Heterocephalus_glaber_female
ENSIPUG00000000789	polrmt	97	44.582	ENSHGLG00100005762	POLRMT	98	45.097	Heterocephalus_glaber_male
ENSIPUG00000000789	polrmt	100	63.364	ENSHCOG00000001565	polrmt	100	61.162	Hippocampus_comes
ENSIPUG00000000789	polrmt	95	65.874	ENSSTOG00000003431	POLRMT	97	66.497	Ictidomys_tridecemlineatus
ENSIPUG00000000789	polrmt	94	61.076	ENSJJAG00000012916	Polrmt	98	61.551	Jaculus_jaculus
ENSIPUG00000000789	polrmt	100	62.827	ENSKMAG00000004426	polrmt	100	62.394	Kryptolebias_marmoratus
ENSIPUG00000000789	polrmt	100	63.557	ENSLBEG00000016529	polrmt	100	64.030	Labrus_bergylta
ENSIPUG00000000789	polrmt	99	62.951	ENSLACG00000011518	POLRMT	99	63.045	Latimeria_chalumnae
ENSIPUG00000000789	polrmt	100	61.334	ENSLOCG00000005222	polrmt	100	61.334	Lepisosteus_oculatus
ENSIPUG00000000789	polrmt	95	48.547	ENSLAFG00000001860	POLRMT	97	47.506	Loxodonta_africana
ENSIPUG00000000789	polrmt	96	46.942	ENSMFAG00000031466	POLRMT	97	46.783	Macaca_fascicularis
ENSIPUG00000000789	polrmt	96	46.619	ENSMNEG00000039129	POLRMT	97	46.661	Macaca_nemestrina
ENSIPUG00000000789	polrmt	78	76.238	ENSMLEG00000037404	POLRMT	96	66.852	Mandrillus_leucophaeus
ENSIPUG00000000789	polrmt	100	65.441	ENSMAMG00000019284	polrmt	100	64.388	Mastacembelus_armatus
ENSIPUG00000000789	polrmt	100	64.354	ENSMZEG00005009932	polrmt	100	63.949	Maylandia_zebra
ENSIPUG00000000789	polrmt	84	60.470	ENSMGAG00000003243	POLRMT	99	54.265	Meleagris_gallopavo
ENSIPUG00000000789	polrmt	95	48.365	ENSMAUG00000019392	Polrmt	98	45.856	Mesocricetus_auratus
ENSIPUG00000000789	polrmt	96	48.986	ENSMICG00000016701	POLRMT	99	47.731	Microcebus_murinus
ENSIPUG00000000789	polrmt	95	46.352	ENSMOCG00000008868	Polrmt	98	44.961	Microtus_ochrogaster
ENSIPUG00000000789	polrmt	97	62.158	ENSMMOG00000000705	polrmt	99	59.556	Mola_mola
ENSIPUG00000000789	polrmt	95	52.835	ENSMODG00000006478	POLRMT	98	50.817	Monodelphis_domestica
ENSIPUG00000000789	polrmt	100	63.666	ENSMALG00000021224	polrmt	100	62.980	Monopterus_albus
ENSIPUG00000000789	polrmt	96	46.970	MGP_CAROLIEiJ_G0015538	Polrmt	100	61.839	Mus_caroli
ENSIPUG00000000789	polrmt	95	48.718	ENSMUSG00000020329	Polrmt	99	61.201	Mus_musculus
ENSIPUG00000000789	polrmt	95	48.412	MGP_PahariEiJ_G0030951	Polrmt	100	61.432	Mus_pahari
ENSIPUG00000000789	polrmt	95	48.158	MGP_SPRETEiJ_G0016356	Polrmt	100	61.839	Mus_spretus
ENSIPUG00000000789	polrmt	97	47.826	ENSMPUG00000009910	POLRMT	83	53.089	Mustela_putorius_furo
ENSIPUG00000000789	polrmt	100	48.602	ENSMLUG00000009223	POLRMT	98	48.813	Myotis_lucifugus
ENSIPUG00000000789	polrmt	96	64.603	ENSNGAG00000005498	Polrmt	99	64.762	Nannospalax_galili
ENSIPUG00000000789	polrmt	98	65.461	ENSNBRG00000023530	polrmt	100	63.431	Neolamprologus_brichardi
ENSIPUG00000000789	polrmt	96	47.528	ENSNLEG00000000718	POLRMT	97	47.339	Nomascus_leucogenys
ENSIPUG00000000789	polrmt	67	56.787	ENSOPRG00000013579	POLRMT	67	57.534	Ochotona_princeps
ENSIPUG00000000789	polrmt	100	65.599	ENSONIG00000002405	polrmt	100	66.884	Oreochromis_niloticus
ENSIPUG00000000789	polrmt	100	65.802	ENSORLG00000004329	polrmt	97	64.883	Oryzias_latipes
ENSIPUG00000000789	polrmt	100	65.883	ENSORLG00020003896	polrmt	100	65.102	Oryzias_latipes_hni
ENSIPUG00000000789	polrmt	100	65.354	ENSORLG00015022238	polrmt	97	64.441	Oryzias_latipes_hsok
ENSIPUG00000000789	polrmt	100	64.367	ENSOMEG00000008292	polrmt	100	63.982	Oryzias_melastigma
ENSIPUG00000000789	polrmt	96	49.618	ENSOGAG00000007912	POLRMT	97	48.722	Otolemur_garnettii
ENSIPUG00000000789	polrmt	97	40.389	ENSOARG00000008898	POLRMT	85	44.288	Ovis_aries
ENSIPUG00000000789	polrmt	96	45.512	ENSPPAG00000043321	-	97	45.671	Pan_paniscus
ENSIPUG00000000789	polrmt	96	46.392	ENSPPAG00000030853	POLRMT	97	46.440	Pan_paniscus
ENSIPUG00000000789	polrmt	82	62.984	ENSPPRG00000001547	POLRMT	90	62.984	Panthera_pardus
ENSIPUG00000000789	polrmt	96	46.783	ENSPTRG00000010157	POLRMT	93	46.513	Pan_troglodytes
ENSIPUG00000000789	polrmt	96	45.548	ENSPTRG00000039638	-	97	45.707	Pan_troglodytes
ENSIPUG00000000789	polrmt	96	46.815	ENSPANG00000006649	POLRMT	97	46.736	Papio_anubis
ENSIPUG00000000789	polrmt	100	66.011	ENSPKIG00000024580	polrmt	100	65.749	Paramormyrops_kingsleyae
ENSIPUG00000000789	polrmt	95	66.667	ENSPMGG00000014627	polrmt	99	65.956	Periophthalmus_magnuspinnatus
ENSIPUG00000000789	polrmt	94	60.916	ENSPEMG00000011671	Polrmt	98	46.299	Peromyscus_maniculatus_bairdii
ENSIPUG00000000789	polrmt	72	56.636	ENSPMAG00000005070	-	99	56.636	Petromyzon_marinus
ENSIPUG00000000789	polrmt	99	52.999	ENSPCIG00000006103	POLRMT	98	52.835	Phascolarctos_cinereus
ENSIPUG00000000789	polrmt	100	64.768	ENSPFOG00000003911	polrmt	100	64.079	Poecilia_formosa
ENSIPUG00000000789	polrmt	91	64.977	ENSPLAG00000005743	polrmt	98	62.069	Poecilia_latipinna
ENSIPUG00000000789	polrmt	76	56.034	ENSPMEG00000011484	polrmt	96	55.471	Poecilia_mexicana
ENSIPUG00000000789	polrmt	100	64.860	ENSPMEG00000008947	polrmt	99	64.617	Poecilia_mexicana
ENSIPUG00000000789	polrmt	100	63.505	ENSPREG00000007650	polrmt	100	62.575	Poecilia_reticulata
ENSIPUG00000000789	polrmt	85	72.941	ENSPPYG00000009282	POLRMT	97	61.925	Pongo_abelii
ENSIPUG00000000789	polrmt	86	72.973	ENSPCAG00000010816	POLRMT	89	58.470	Procavia_capensis
ENSIPUG00000000789	polrmt	96	47.138	ENSPCOG00000014539	POLRMT	97	46.295	Propithecus_coquereli
ENSIPUG00000000789	polrmt	100	47.329	ENSPVAG00000008403	POLRMT	98	47.277	Pteropus_vampyrus
ENSIPUG00000000789	polrmt	100	64.377	ENSPNYG00000020790	polrmt	100	63.800	Pundamilia_nyererei
ENSIPUG00000000789	polrmt	100	76.573	ENSPNAG00000019790	polrmt	99	76.638	Pygocentrus_nattereri
ENSIPUG00000000789	polrmt	95	48.709	ENSRNOG00000024879	Polrmt	97	46.993	Rattus_norvegicus
ENSIPUG00000000789	polrmt	96	47.012	ENSRBIG00000006728	POLRMT	97	47.012	Rhinopithecus_bieti
ENSIPUG00000000789	polrmt	96	46.736	ENSRROG00000040809	POLRMT	97	46.736	Rhinopithecus_roxellana
ENSIPUG00000000789	polrmt	96	46.299	ENSSBOG00000025388	POLRMT	97	46.299	Saimiri_boliviensis_boliviensis
ENSIPUG00000000789	polrmt	66	60.864	ENSSHAG00000009387	-	100	61.397	Sarcophilus_harrisii
ENSIPUG00000000789	polrmt	100	66.030	ENSSFOG00015005074	polrmt	99	65.924	Scleropages_formosus
ENSIPUG00000000789	polrmt	100	63.796	ENSSMAG00000011851	polrmt	100	62.603	Scophthalmus_maximus
ENSIPUG00000000789	polrmt	100	65.866	ENSSDUG00000004410	polrmt	100	63.569	Seriola_dumerili
ENSIPUG00000000789	polrmt	100	65.949	ENSSLDG00000010643	polrmt	100	63.346	Seriola_lalandi_dorsalis
ENSIPUG00000000789	polrmt	100	63.665	ENSSPAG00000018740	polrmt	100	63.556	Stegastes_partitus
ENSIPUG00000000789	polrmt	96	47.698	ENSSSCG00000035693	POLRMT	97	47.619	Sus_scrofa
ENSIPUG00000000789	polrmt	80	61.445	ENSTGUG00000000621	POLRMT	100	62.157	Taeniopygia_guttata
ENSIPUG00000000789	polrmt	100	63.402	ENSTRUG00000018040	polrmt	100	61.187	Takifugu_rubripes
ENSIPUG00000000789	polrmt	83	71.330	ENSTNIG00000010642	polrmt	99	72.414	Tetraodon_nigroviridis
ENSIPUG00000000789	polrmt	67	65.728	ENSTTRG00000011329	POLRMT	65	65.728	Tursiops_truncatus
ENSIPUG00000000789	polrmt	97	48.066	ENSUAMG00000019616	POLRMT	98	48.066	Ursus_americanus
ENSIPUG00000000789	polrmt	95	46.270	ENSVVUG00000022627	POLRMT	99	46.002	Vulpes_vulpes
ENSIPUG00000000789	polrmt	97	58.425	ENSXETG00000006545	polrmt	95	57.805	Xenopus_tropicalis
ENSIPUG00000000789	polrmt	100	66.612	ENSXMAG00000012464	polrmt	100	63.514	Xiphophorus_maculatus