EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000814 (Gene tree)
Gene ID: 108272515
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4830 bases
Position: chr12:27767078-27771907
Accession: 108272515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001131	RNA_pol_Rpb6	PF01192.22	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001198	-	294	XM_017480961	ENSIPUP00000001131	97 (aa)	XP_017336450	-

Gene Model

Click here to download ENSIPUG00000000814's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000814	polr2f	100	91.753	ENSG00000100142	POLR2F	81	91.209	Homo_sapiens
ENSIPUG00000000814	polr2f	100	97.938	ENSAPOG00000002902	polr2f	76	97.938	Acanthochromis_polyacanthus
ENSIPUG00000000814	polr2f	100	91.753	ENSAMEG00000010331	POLR2F	76	91.753	Ailuropoda_melanoleuca
ENSIPUG00000000814	polr2f	100	97.938	ENSACIG00000000923	polr2f	76	97.938	Amphilophus_citrinellus
ENSIPUG00000000814	polr2f	100	98.969	ENSAOCG00000003182	polr2f	76	98.969	Amphiprion_ocellaris
ENSIPUG00000000814	polr2f	100	98.969	ENSAPEG00000012999	polr2f	76	98.969	Amphiprion_percula
ENSIPUG00000000814	polr2f	100	97.938	ENSATEG00000008929	polr2f	76	97.938	Anabas_testudineus
ENSIPUG00000000814	polr2f	100	91.753	ENSAPLG00000015235	POLR2F	78	91.753	Anas_platyrhynchos
ENSIPUG00000000814	polr2f	100	92.784	ENSACAG00000015288	POLR2F	76	92.784	Anolis_carolinensis
ENSIPUG00000000814	polr2f	100	91.753	ENSANAG00000020840	POLR2F	80	91.753	Aotus_nancymaae
ENSIPUG00000000814	polr2f	100	97.938	ENSACLG00000016129	polr2f	76	97.938	Astatotilapia_calliptera
ENSIPUG00000000814	polr2f	100	97.938	ENSAMXG00000012812	polr2f	76	97.938	Astyanax_mexicanus
ENSIPUG00000000814	polr2f	100	91.753	ENSBTAG00000004820	POLR2F	76	91.753	Bos_taurus
ENSIPUG00000000814	polr2f	82	77.500	WBGene00007355	rpb-6	68	69.149	Caenorhabditis_elegans
ENSIPUG00000000814	polr2f	100	91.753	ENSCJAG00000048241	POLR2F	80	91.753	Callithrix_jacchus
ENSIPUG00000000814	polr2f	100	91.753	ENSCAFG00000001437	POLR2F	76	91.753	Canis_familiaris
ENSIPUG00000000814	polr2f	100	91.753	ENSCHIG00000012907	POLR2F	76	91.753	Capra_hircus
ENSIPUG00000000814	polr2f	100	91.753	ENSTSYG00000008187	POLR2F	76	91.753	Carlito_syrichta
ENSIPUG00000000814	polr2f	100	91.753	ENSCAPG00000013419	POLR2F	76	91.753	Cavia_aperea
ENSIPUG00000000814	polr2f	100	91.753	ENSCPOG00000034094	POLR2F	76	91.753	Cavia_porcellus
ENSIPUG00000000814	polr2f	100	91.753	ENSCCAG00000036489	POLR2F	76	91.753	Cebus_capucinus
ENSIPUG00000000814	polr2f	100	91.753	ENSCATG00000041014	POLR2F	80	91.753	Cercocebus_atys
ENSIPUG00000000814	polr2f	100	91.753	ENSCLAG00000017167	POLR2F	76	91.753	Chinchilla_lanigera
ENSIPUG00000000814	polr2f	100	91.753	ENSCSAG00000006862	POLR2F	76	91.753	Chlorocebus_sabaeus
ENSIPUG00000000814	polr2f	100	92.784	ENSCPBG00000023030	POLR2F	50	92.784	Chrysemys_picta_bellii
ENSIPUG00000000814	polr2f	97	77.895	ENSCING00000019359	-	66	79.570	Ciona_intestinalis
ENSIPUG00000000814	polr2f	100	91.753	ENSCANG00000041884	POLR2F	80	91.753	Colobus_angolensis_palliatus
ENSIPUG00000000814	polr2f	100	91.753	ENSCGRG00001023541	POLR2F	76	91.753	Cricetulus_griseus_chok1gshd
ENSIPUG00000000814	polr2f	100	91.753	ENSCGRG00000011921	POLR2F	76	91.753	Cricetulus_griseus_crigri
ENSIPUG00000000814	polr2f	100	98.969	ENSCSEG00000006848	polr2f	76	98.969	Cynoglossus_semilaevis
ENSIPUG00000000814	polr2f	100	97.938	ENSCVAG00000010437	polr2f	76	97.938	Cyprinodon_variegatus
ENSIPUG00000000814	polr2f	100	97.938	ENSDARG00000036625	polr2f	76	97.938	Danio_rerio
ENSIPUG00000000814	polr2f	100	91.753	ENSDNOG00000005884	POLR2F	76	91.753	Dasypus_novemcinctus
ENSIPUG00000000814	polr2f	100	91.753	ENSDORG00000024789	Polr2f	76	91.753	Dipodomys_ordii
ENSIPUG00000000814	polr2f	100	72.000	FBgn0003275	RpII18	76	74.000	Drosophila_melanogaster
ENSIPUG00000000814	polr2f	100	67.010	ENSEBUG00000002842	-	84	67.010	Eptatretus_burgeri
ENSIPUG00000000814	polr2f	70	85.294	ENSEBUG00000008509	polr2f	70	85.294	Eptatretus_burgeri
ENSIPUG00000000814	polr2f	70	89.706	ENSEASG00005018802	-	61	89.706	Equus_asinus_asinus
ENSIPUG00000000814	polr2f	100	88.660	ENSEEUG00000011014	POLR2F	76	88.660	Erinaceus_europaeus
ENSIPUG00000000814	polr2f	100	96.907	ENSELUG00000000319	polr2f	76	96.907	Esox_lucius
ENSIPUG00000000814	polr2f	100	91.753	ENSFCAG00000002806	POLR2F	80	91.753	Felis_catus
ENSIPUG00000000814	polr2f	100	91.753	ENSFDAG00000009926	POLR2F	76	91.753	Fukomys_damarensis
ENSIPUG00000000814	polr2f	100	96.907	ENSFHEG00000005448	polr2f	77	96.907	Fundulus_heteroclitus
ENSIPUG00000000814	polr2f	100	88.660	ENSGMOG00000009967	polr2f	76	88.660	Gadus_morhua
ENSIPUG00000000814	polr2f	100	91.753	ENSGALG00000012291	POLR2F	76	91.753	Gallus_gallus
ENSIPUG00000000814	polr2f	100	96.907	ENSGAFG00000017573	polr2f	76	96.907	Gambusia_affinis
ENSIPUG00000000814	polr2f	100	95.876	ENSGACG00000007322	polr2f	76	95.876	Gasterosteus_aculeatus
ENSIPUG00000000814	polr2f	100	92.784	ENSGAGG00000021757	POLR2F	76	92.784	Gopherus_agassizii
ENSIPUG00000000814	polr2f	100	91.753	ENSGGOG00000005213	POLR2F	80	91.753	Gorilla_gorilla
ENSIPUG00000000814	polr2f	100	97.938	ENSHBUG00000022089	polr2f	76	97.938	Haplochromis_burtoni
ENSIPUG00000000814	polr2f	100	91.753	ENSHGLG00000018942	POLR2F	76	91.753	Heterocephalus_glaber_female
ENSIPUG00000000814	polr2f	100	91.753	ENSHGLG00100012851	POLR2F	76	91.753	Heterocephalus_glaber_male
ENSIPUG00000000814	polr2f	100	93.814	ENSHCOG00000006149	polr2f	76	93.814	Hippocampus_comes
ENSIPUG00000000814	polr2f	100	91.753	ENSSTOG00000025722	POLR2F	76	91.753	Ictidomys_tridecemlineatus
ENSIPUG00000000814	polr2f	100	91.753	ENSJJAG00000008097	Polr2f	76	91.753	Jaculus_jaculus
ENSIPUG00000000814	polr2f	100	97.938	ENSKMAG00000014230	polr2f	76	97.938	Kryptolebias_marmoratus
ENSIPUG00000000814	polr2f	100	95.876	ENSLBEG00000008383	polr2f	81	95.876	Labrus_bergylta
ENSIPUG00000000814	polr2f	100	95.876	ENSLACG00000003931	POLR2F	76	95.876	Latimeria_chalumnae
ENSIPUG00000000814	polr2f	100	98.969	ENSLOCG00000011827	polr2f	75	98.969	Lepisosteus_oculatus
ENSIPUG00000000814	polr2f	100	91.753	ENSLAFG00000012632	POLR2F	76	91.753	Loxodonta_africana
ENSIPUG00000000814	polr2f	100	91.753	ENSMFAG00000033687	POLR2F	80	91.753	Macaca_fascicularis
ENSIPUG00000000814	polr2f	100	91.753	ENSMMUG00000038231	POLR2F	80	91.753	Macaca_mulatta
ENSIPUG00000000814	polr2f	100	91.753	ENSMNEG00000044365	POLR2F	80	91.753	Macaca_nemestrina
ENSIPUG00000000814	polr2f	100	91.753	ENSMLEG00000033077	POLR2F	80	91.753	Mandrillus_leucophaeus
ENSIPUG00000000814	polr2f	100	97.938	ENSMAMG00000008056	polr2f	76	97.938	Mastacembelus_armatus
ENSIPUG00000000814	polr2f	100	97.938	ENSMZEG00005005705	polr2f	76	97.938	Maylandia_zebra
ENSIPUG00000000814	polr2f	100	91.753	ENSMGAG00000012504	POLR2F	76	91.753	Meleagris_gallopavo
ENSIPUG00000000814	polr2f	100	91.753	ENSMAUG00000018586	Polr2f	76	91.753	Mesocricetus_auratus
ENSIPUG00000000814	polr2f	100	91.753	ENSMICG00000013128	POLR2F	80	91.753	Microcebus_murinus
ENSIPUG00000000814	polr2f	100	91.753	ENSMOCG00000000237	Polr2f	76	91.753	Microtus_ochrogaster
ENSIPUG00000000814	polr2f	100	98.969	ENSMMOG00000005106	polr2f	76	98.969	Mola_mola
ENSIPUG00000000814	polr2f	100	92.784	ENSMODG00000019063	POLR2F	76	92.784	Monodelphis_domestica
ENSIPUG00000000814	polr2f	100	97.938	ENSMALG00000001444	polr2f	76	97.938	Monopterus_albus
ENSIPUG00000000814	polr2f	100	90.722	MGP_CAROLIEiJ_G0020006	Polr2f	76	90.722	Mus_caroli
ENSIPUG00000000814	polr2f	100	90.722	ENSMUSG00000033020	Polr2f	76	90.722	Mus_musculus
ENSIPUG00000000814	polr2f	100	90.722	MGP_PahariEiJ_G0020008	Polr2f	76	90.722	Mus_pahari
ENSIPUG00000000814	polr2f	100	90.722	MGP_SPRETEiJ_G0020904	Polr2f	76	90.722	Mus_spretus
ENSIPUG00000000814	polr2f	100	91.753	ENSMPUG00000012997	POLR2F	76	91.753	Mustela_putorius_furo
ENSIPUG00000000814	polr2f	97	86.170	ENSMLUG00000029612	-	75	86.170	Myotis_lucifugus
ENSIPUG00000000814	polr2f	100	88.889	ENSMLUG00000014315	-	77	88.889	Myotis_lucifugus
ENSIPUG00000000814	polr2f	100	91.753	ENSNGAG00000020682	Polr2f	76	91.753	Nannospalax_galili
ENSIPUG00000000814	polr2f	100	97.938	ENSNBRG00000002492	polr2f	76	97.938	Neolamprologus_brichardi
ENSIPUG00000000814	polr2f	100	91.753	ENSNLEG00000014987	-	80	91.753	Nomascus_leucogenys
ENSIPUG00000000814	polr2f	100	91.753	ENSODEG00000014123	POLR2F	76	91.753	Octodon_degus
ENSIPUG00000000814	polr2f	100	97.938	ENSONIG00000008394	polr2f	76	97.938	Oreochromis_niloticus
ENSIPUG00000000814	polr2f	100	92.784	ENSOANG00000014684	POLR2F	76	92.784	Ornithorhynchus_anatinus
ENSIPUG00000000814	polr2f	100	91.753	ENSOCUG00000012064	POLR2F	76	91.753	Oryctolagus_cuniculus
ENSIPUG00000000814	polr2f	100	97.938	ENSORLG00000014580	polr2f	76	97.938	Oryzias_latipes
ENSIPUG00000000814	polr2f	100	98.969	ENSORLG00020006910	polr2f	76	98.969	Oryzias_latipes_hni
ENSIPUG00000000814	polr2f	87	96.429	ENSORLG00015015332	polr2f	57	96.429	Oryzias_latipes_hsok
ENSIPUG00000000814	polr2f	100	91.753	ENSOGAG00000025463	POLR2F	76	91.753	Otolemur_garnettii
ENSIPUG00000000814	polr2f	100	91.753	ENSOARG00000014692	POLR2F	76	91.753	Ovis_aries
ENSIPUG00000000814	polr2f	100	91.753	ENSPPAG00000024276	POLR2F	80	91.753	Pan_paniscus
ENSIPUG00000000814	polr2f	100	91.753	ENSPPRG00000013030	POLR2F	80	91.753	Panthera_pardus
ENSIPUG00000000814	polr2f	100	91.753	ENSPTIG00000000632	POLR2F	81	91.753	Panthera_tigris_altaica
ENSIPUG00000000814	polr2f	100	91.753	ENSPTRG00000014356	POLR2F	80	91.753	Pan_troglodytes
ENSIPUG00000000814	polr2f	100	91.753	ENSPANG00000023979	POLR2F	80	91.753	Papio_anubis
ENSIPUG00000000814	polr2f	100	97.938	ENSPKIG00000002464	polr2f	76	97.938	Paramormyrops_kingsleyae
ENSIPUG00000000814	polr2f	73	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSIPUG00000000814	polr2f	100	98.969	ENSPMGG00000009619	polr2f	76	98.969	Periophthalmus_magnuspinnatus
ENSIPUG00000000814	polr2f	100	91.753	ENSPEMG00000008322	Polr2f	76	91.753	Peromyscus_maniculatus_bairdii
ENSIPUG00000000814	polr2f	100	92.784	ENSPCIG00000012000	-	76	92.784	Phascolarctos_cinereus
ENSIPUG00000000814	polr2f	100	97.938	ENSPFOG00000000139	polr2f	76	97.938	Poecilia_formosa
ENSIPUG00000000814	polr2f	100	97.938	ENSPLAG00000000988	polr2f	76	97.938	Poecilia_latipinna
ENSIPUG00000000814	polr2f	100	97.938	ENSPMEG00000019063	polr2f	76	97.938	Poecilia_mexicana
ENSIPUG00000000814	polr2f	70	100.000	ENSPREG00000016749	polr2f	69	100.000	Poecilia_reticulata
ENSIPUG00000000814	polr2f	100	91.753	ENSPPYG00000011809	POLR2F	76	91.753	Pongo_abelii
ENSIPUG00000000814	polr2f	100	91.753	ENSPCOG00000025716	POLR2F	80	91.753	Propithecus_coquereli
ENSIPUG00000000814	polr2f	100	97.938	ENSPNYG00000019790	polr2f	76	97.938	Pundamilia_nyererei
ENSIPUG00000000814	polr2f	100	98.969	ENSPNAG00000009017	polr2f	76	98.969	Pygocentrus_nattereri
ENSIPUG00000000814	polr2f	100	90.722	ENSRNOG00000011214	Polr2f	76	90.722	Rattus_norvegicus
ENSIPUG00000000814	polr2f	100	91.753	ENSRBIG00000044878	POLR2F	80	91.753	Rhinopithecus_bieti
ENSIPUG00000000814	polr2f	100	91.753	ENSRROG00000019586	POLR2F	80	91.753	Rhinopithecus_roxellana
ENSIPUG00000000814	polr2f	100	91.753	ENSSBOG00000023340	POLR2F	80	91.753	Saimiri_boliviensis_boliviensis
ENSIPUG00000000814	polr2f	100	92.784	ENSSHAG00000008502	POLR2F	76	92.784	Sarcophilus_harrisii
ENSIPUG00000000814	polr2f	100	97.938	ENSSFOG00015012810	polr2f	76	97.938	Scleropages_formosus
ENSIPUG00000000814	polr2f	100	97.938	ENSSMAG00000005354	polr2f	76	97.938	Scophthalmus_maximus
ENSIPUG00000000814	polr2f	100	98.969	ENSSDUG00000016273	polr2f	76	98.969	Seriola_dumerili
ENSIPUG00000000814	polr2f	100	98.969	ENSSLDG00000024895	polr2f	76	98.969	Seriola_lalandi_dorsalis
ENSIPUG00000000814	polr2f	100	92.784	ENSSPUG00000011343	POLR2F	76	92.784	Sphenodon_punctatus
ENSIPUG00000000814	polr2f	100	97.938	ENSSPAG00000019646	polr2f	76	97.938	Stegastes_partitus
ENSIPUG00000000814	polr2f	100	90.722	ENSSSCG00000000116	POLR2F	76	90.722	Sus_scrofa
ENSIPUG00000000814	polr2f	100	92.784	ENSTGUG00000010476	POLR2F	71	92.784	Taeniopygia_guttata
ENSIPUG00000000814	polr2f	70	92.647	ENSTGUG00000016504	-	77	92.647	Taeniopygia_guttata
ENSIPUG00000000814	polr2f	100	97.938	ENSTRUG00000021130	polr2f	54	97.938	Takifugu_rubripes
ENSIPUG00000000814	polr2f	100	98.969	ENSTNIG00000010827	polr2f	76	98.969	Tetraodon_nigroviridis
ENSIPUG00000000814	polr2f	100	91.753	ENSUAMG00000020504	POLR2F	76	91.753	Ursus_americanus
ENSIPUG00000000814	polr2f	100	91.753	ENSUMAG00000015052	POLR2F	76	91.753	Ursus_maritimus
ENSIPUG00000000814	polr2f	100	91.753	ENSVVUG00000024021	POLR2F	73	91.753	Vulpes_vulpes
ENSIPUG00000000814	polr2f	100	94.845	ENSXETG00000006346	polr2f	76	94.845	Xenopus_tropicalis
ENSIPUG00000000814	polr2f	100	97.938	ENSXCOG00000015983	polr2f	76	97.938	Xiphophorus_couchianus
ENSIPUG00000000814	polr2f	100	97.938	ENSXMAG00000001559	polr2f	76	97.938	Xiphophorus_maculatus