EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000867 (Gene tree)
Gene ID: 108264623
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 74615 bases
Position: chr4:18520803-18595417
Accession: 108264623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001209	SRP54	PF00448.22	4.3e-49	1	1
ENSIPUP00000001209	SRP54_N	PF02881.19	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001278	-	3044	XM_017466333	ENSIPUP00000001209	611 (aa)	XP_017321822	-

Gene Model

Click here to download ENSIPUG00000000867's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000867	srpra	99	64.830	ENSG00000182934	SRPRA	98	61.675	Homo_sapiens
ENSIPUG00000000867	srpra	99	74.959	ENSAPOG00000017588	srpra	94	75.974	Acanthochromis_polyacanthus
ENSIPUG00000000867	srpra	99	64.239	ENSAMEG00000000117	SRPRA	94	64.620	Ailuropoda_melanoleuca
ENSIPUG00000000867	srpra	99	74.673	ENSACIG00000021588	srpra	94	74.510	Amphilophus_citrinellus
ENSIPUG00000000867	srpra	99	74.919	ENSAOCG00000018884	srpra	94	75.812	Amphiprion_ocellaris
ENSIPUG00000000867	srpra	99	74.919	ENSAPEG00000022286	srpra	93	71.078	Amphiprion_percula
ENSIPUG00000000867	srpra	99	74.675	ENSATEG00000023578	srpra	88	89.349	Anabas_testudineus
ENSIPUG00000000867	srpra	99	66.827	ENSAPLG00000016079	SRPRA	99	67.416	Anas_platyrhynchos
ENSIPUG00000000867	srpra	99	66.828	ENSACAG00000000108	SRPRA	94	67.311	Anolis_carolinensis
ENSIPUG00000000867	srpra	99	64.506	ENSANAG00000020346	SRPRA	98	61.353	Aotus_nancymaae
ENSIPUG00000000867	srpra	99	75.041	ENSACLG00000000518	srpra	94	75.530	Astatotilapia_calliptera
ENSIPUG00000000867	srpra	99	74.342	ENSAMXG00000009975	srpra	93	74.178	Astyanax_mexicanus
ENSIPUG00000000867	srpra	99	63.974	ENSBTAG00000014105	SRPRA	94	64.459	Bos_taurus
ENSIPUG00000000867	srpra	99	47.249	WBGene00009521	F38A1.8	94	47.411	Caenorhabditis_elegans
ENSIPUG00000000867	srpra	99	64.668	ENSCJAG00000008752	SRPRA	98	61.514	Callithrix_jacchus
ENSIPUG00000000867	srpra	99	64.782	ENSCAFG00000010474	SRPRA	95	64.839	Canis_familiaris
ENSIPUG00000000867	srpra	99	64.506	ENSCAFG00020010608	SRPRA	94	64.563	Canis_lupus_dingo
ENSIPUG00000000867	srpra	99	64.459	ENSCHIG00000012423	SRPRA	94	64.136	Capra_hircus
ENSIPUG00000000867	srpra	79	78.947	ENSTSYG00000005187	SRPRA	95	83.384	Carlito_syrichta
ENSIPUG00000000867	srpra	99	63.562	ENSCAPG00000007098	SRPRA	91	87.218	Cavia_aperea
ENSIPUG00000000867	srpra	99	64.610	ENSCPOG00000014976	SRPRA	91	87.218	Cavia_porcellus
ENSIPUG00000000867	srpra	99	64.239	ENSCCAG00000025602	SRPRA	98	61.093	Cebus_capucinus
ENSIPUG00000000867	srpra	99	64.830	ENSCATG00000039354	SRPRA	98	61.675	Cercocebus_atys
ENSIPUG00000000867	srpra	99	64.390	ENSCLAG00000016839	SRPRA	94	64.228	Chinchilla_lanigera
ENSIPUG00000000867	srpra	99	64.668	ENSCSAG00000002271	SRPRA	94	64.344	Chlorocebus_sabaeus
ENSIPUG00000000867	srpra	55	85.714	ENSCHOG00000010015	-	71	85.714	Choloepus_hoffmanni
ENSIPUG00000000867	srpra	99	66.343	ENSCPBG00000011128	SRPRA	94	66.721	Chrysemys_picta_bellii
ENSIPUG00000000867	srpra	99	55.754	ENSCING00000008954	-	94	56.726	Ciona_intestinalis
ENSIPUG00000000867	srpra	99	57.447	ENSCSAVG00000005602	-	94	57.774	Ciona_savignyi
ENSIPUG00000000867	srpra	99	64.459	ENSCANG00000032337	SRPRA	98	61.316	Colobus_angolensis_palliatus
ENSIPUG00000000867	srpra	99	64.286	ENSCGRG00001017670	Srpr	94	64.286	Cricetulus_griseus_chok1gshd
ENSIPUG00000000867	srpra	99	64.286	ENSCGRG00000009892	Srpr	90	87.407	Cricetulus_griseus_crigri
ENSIPUG00000000867	srpra	99	76.136	ENSCSEG00000002374	srpra	94	76.299	Cynoglossus_semilaevis
ENSIPUG00000000867	srpra	99	73.021	ENSCVAG00000019881	srpra	94	73.990	Cyprinodon_variegatus
ENSIPUG00000000867	srpra	99	76.961	ENSDARG00000061124	srpra	94	76.961	Danio_rerio
ENSIPUG00000000867	srpra	99	63.593	ENSDNOG00000010821	SRPRA	94	63.434	Dasypus_novemcinctus
ENSIPUG00000000867	srpra	99	64.228	ENSDORG00000016719	Srpr	94	63.902	Dipodomys_ordii
ENSIPUG00000000867	srpra	98	51.074	FBgn0010391	Gtp-bp	92	51.870	Drosophila_melanogaster
ENSIPUG00000000867	srpra	99	63.462	ENSETEG00000013956	SRPRA	94	62.821	Echinops_telfairi
ENSIPUG00000000867	srpra	53	80.615	ENSEBUG00000002602	srpra	92	66.357	Eptatretus_burgeri
ENSIPUG00000000867	srpra	99	64.239	ENSEASG00005022980	SRPRA	94	64.078	Equus_asinus_asinus
ENSIPUG00000000867	srpra	99	64.239	ENSECAG00000014692	SRPRA	94	64.078	Equus_caballus
ENSIPUG00000000867	srpra	99	59.350	ENSEEUG00000007920	SRPRA	94	59.253	Erinaceus_europaeus
ENSIPUG00000000867	srpra	99	76.013	ENSELUG00000017643	srpra	94	76.661	Esox_lucius
ENSIPUG00000000867	srpra	99	65.161	ENSFCAG00000011274	-	98	62.179	Felis_catus
ENSIPUG00000000867	srpra	78	57.520	ENSFCAG00000030894	-	93	57.114	Felis_catus
ENSIPUG00000000867	srpra	99	66.774	ENSFALG00000005048	SRPRA	95	66.613	Ficedula_albicollis
ENSIPUG00000000867	srpra	99	64.065	ENSFDAG00000016229	SRPRA	92	82.517	Fukomys_damarensis
ENSIPUG00000000867	srpra	99	75.081	ENSFHEG00000016959	srpra	94	74.595	Fundulus_heteroclitus
ENSIPUG00000000867	srpra	99	73.246	ENSGMOG00000013244	srpra	94	73.083	Gadus_morhua
ENSIPUG00000000867	srpra	99	66.667	ENSGALG00000030759	SRPRA	94	67.367	Gallus_gallus
ENSIPUG00000000867	srpra	99	75.000	ENSGAFG00000000453	srpra	94	75.120	Gambusia_affinis
ENSIPUG00000000867	srpra	99	74.430	ENSGACG00000006550	srpra	94	74.267	Gasterosteus_aculeatus
ENSIPUG00000000867	srpra	99	66.828	ENSGAGG00000021157	SRPRA	94	67.205	Gopherus_agassizii
ENSIPUG00000000867	srpra	99	64.830	ENSGGOG00000012962	SRPRA	98	61.675	Gorilla_gorilla
ENSIPUG00000000867	srpra	99	74.878	ENSHBUG00000000119	srpra	94	75.367	Haplochromis_burtoni
ENSIPUG00000000867	srpra	99	64.286	ENSHGLG00000001597	SRPR	94	87.879	Heterocephalus_glaber_female
ENSIPUG00000000867	srpra	99	64.286	ENSHGLG00100006449	SRPR	94	87.879	Heterocephalus_glaber_male
ENSIPUG00000000867	srpra	99	72.890	ENSHCOG00000010749	srpra	94	73.864	Hippocampus_comes
ENSIPUG00000000867	srpra	99	64.668	ENSSTOG00000009897	SRPRA	94	64.344	Ictidomys_tridecemlineatus
ENSIPUG00000000867	srpra	99	63.474	ENSJJAG00000020272	Srpr	94	63.312	Jaculus_jaculus
ENSIPUG00000000867	srpra	99	74.392	ENSKMAG00000002280	srpra	94	75.041	Kryptolebias_marmoratus
ENSIPUG00000000867	srpra	99	74.797	ENSLBEG00000009608	srpra	94	75.649	Labrus_bergylta
ENSIPUG00000000867	srpra	99	64.856	ENSLACG00000017781	SRPRA	94	65.978	Latimeria_chalumnae
ENSIPUG00000000867	srpra	99	72.150	ENSLOCG00000002733	srpra	94	72.150	Lepisosteus_oculatus
ENSIPUG00000000867	srpra	99	63.082	ENSLAFG00000010252	SRPRA	94	64.194	Loxodonta_africana
ENSIPUG00000000867	srpra	99	64.830	ENSMFAG00000032606	SRPRA	98	61.675	Macaca_fascicularis
ENSIPUG00000000867	srpra	99	64.830	ENSMMUG00000007938	SRPRA	98	61.675	Macaca_mulatta
ENSIPUG00000000867	srpra	99	64.830	ENSMNEG00000030709	SRPRA	98	61.675	Macaca_nemestrina
ENSIPUG00000000867	srpra	99	64.830	ENSMLEG00000043404	SRPRA	98	61.675	Mandrillus_leucophaeus
ENSIPUG00000000867	srpra	99	74.351	ENSMAMG00000000473	srpra	94	74.878	Mastacembelus_armatus
ENSIPUG00000000867	srpra	99	75.041	ENSMZEG00005013432	srpra	94	75.530	Maylandia_zebra
ENSIPUG00000000867	srpra	99	65.961	ENSMGAG00000000732	SRPRA	100	66.884	Meleagris_gallopavo
ENSIPUG00000000867	srpra	99	64.182	ENSMAUG00000015648	Srpr	94	64.182	Mesocricetus_auratus
ENSIPUG00000000867	srpra	99	64.506	ENSMICG00000015981	SRPRA	98	61.514	Microcebus_murinus
ENSIPUG00000000867	srpra	99	64.123	ENSMOCG00000008311	Srpr	94	64.123	Microtus_ochrogaster
ENSIPUG00000000867	srpra	99	69.790	ENSMMOG00000005019	srpra	94	69.628	Mola_mola
ENSIPUG00000000867	srpra	99	63.799	ENSMODG00000004576	-	94	63.636	Monodelphis_domestica
ENSIPUG00000000867	srpra	99	75.935	ENSMALG00000011343	srpra	94	76.136	Monopterus_albus
ENSIPUG00000000867	srpra	99	64.390	MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	Mus_caroli
ENSIPUG00000000867	srpra	99	64.065	ENSMUSG00000032042	Srpr	86	87.879	Mus_musculus
ENSIPUG00000000867	srpra	99	64.228	MGP_PahariEiJ_G0014816	Srpr	86	87.879	Mus_pahari
ENSIPUG00000000867	srpra	99	60.896	MGP_SPRETEiJ_G0033075	Srpr	94	60.896	Mus_spretus
ENSIPUG00000000867	srpra	99	64.239	ENSMPUG00000006626	SRPRA	94	64.620	Mustela_putorius_furo
ENSIPUG00000000867	srpra	99	63.902	ENSMLUG00000017334	SRPRA	94	63.826	Myotis_lucifugus
ENSIPUG00000000867	srpra	99	64.390	ENSNGAG00000015686	Srpr	94	64.228	Nannospalax_galili
ENSIPUG00000000867	srpra	99	75.041	ENSNBRG00000017311	srpra	94	75.530	Neolamprologus_brichardi
ENSIPUG00000000867	srpra	99	65.041	ENSNLEG00000007467	SRPRA	99	65.260	Nomascus_leucogenys
ENSIPUG00000000867	srpra	99	64.182	ENSMEUG00000004956	SRPRA	100	64.019	Notamacropus_eugenii
ENSIPUG00000000867	srpra	99	60.356	ENSOPRG00000013160	SRPRA	94	60.032	Ochotona_princeps
ENSIPUG00000000867	srpra	99	64.169	ENSODEG00000004730	SRPRA	94	64.123	Octodon_degus
ENSIPUG00000000867	srpra	99	74.551	ENSONIG00000005324	srpra	94	75.041	Oreochromis_niloticus
ENSIPUG00000000867	srpra	99	64.506	ENSOCUG00000017057	SRPRA	94	64.182	Oryctolagus_cuniculus
ENSIPUG00000000867	srpra	84	91.429	ENSORLG00000014676	srpra	94	88.393	Oryzias_latipes
ENSIPUG00000000867	srpra	99	73.246	ENSORLG00020009240	srpra	94	73.941	Oryzias_latipes_hni
ENSIPUG00000000867	srpra	99	73.052	ENSORLG00015015405	srpra	94	73.864	Oryzias_latipes_hsok
ENSIPUG00000000867	srpra	99	73.693	ENSOMEG00000005872	srpra	94	74.388	Oryzias_melastigma
ENSIPUG00000000867	srpra	99	64.773	ENSOGAG00000008926	SRPRA	94	64.448	Otolemur_garnettii
ENSIPUG00000000867	srpra	99	63.974	ENSOARG00000012397	SRPRA	94	64.459	Ovis_aries
ENSIPUG00000000867	srpra	99	64.830	ENSPPAG00000030813	SRPRA	98	61.675	Pan_paniscus
ENSIPUG00000000867	srpra	99	65.161	ENSPPRG00000001542	SRPRA	98	62.179	Panthera_pardus
ENSIPUG00000000867	srpra	99	65.000	ENSPTIG00000006989	SRPRA	98	62.019	Panthera_tigris_altaica
ENSIPUG00000000867	srpra	99	64.830	ENSPTRG00000028360	SRPRA	98	61.675	Pan_troglodytes
ENSIPUG00000000867	srpra	99	64.830	ENSPANG00000010858	SRPRA	98	61.675	Papio_anubis
ENSIPUG00000000867	srpra	99	70.947	ENSPKIG00000016106	srpra	94	72.977	Paramormyrops_kingsleyae
ENSIPUG00000000867	srpra	99	67.045	ENSPSIG00000012009	SRPRA	100	67.423	Pelodiscus_sinensis
ENSIPUG00000000867	srpra	99	74.919	ENSPMGG00000001393	srpra	94	74.756	Periophthalmus_magnuspinnatus
ENSIPUG00000000867	srpra	99	64.123	ENSPEMG00000018279	Srpr	94	64.123	Peromyscus_maniculatus_bairdii
ENSIPUG00000000867	srpra	99	58.374	ENSPMAG00000009559	srpra	94	58.805	Petromyzon_marinus
ENSIPUG00000000867	srpra	99	63.710	ENSPCIG00000010207	SRPRA	94	63.505	Phascolarctos_cinereus
ENSIPUG00000000867	srpra	99	75.201	ENSPFOG00000003114	srpra	94	74.879	Poecilia_formosa
ENSIPUG00000000867	srpra	99	75.527	ENSPLAG00000007323	srpra	94	75.203	Poecilia_latipinna
ENSIPUG00000000867	srpra	99	75.201	ENSPMEG00000015658	srpra	94	74.879	Poecilia_mexicana
ENSIPUG00000000867	srpra	99	75.487	ENSPREG00000004937	srpra	94	74.557	Poecilia_reticulata
ENSIPUG00000000867	srpra	99	55.532	ENSPPYG00000004045	SRPRA	93	55.106	Pongo_abelii
ENSIPUG00000000867	srpra	52	92.248	ENSPCAG00000003801	-	51	92.248	Procavia_capensis
ENSIPUG00000000867	srpra	99	64.725	ENSPCOG00000025726	SRPRA	98	60.759	Propithecus_coquereli
ENSIPUG00000000867	srpra	99	64.065	ENSPVAG00000000993	SRPRA	94	63.740	Pteropus_vampyrus
ENSIPUG00000000867	srpra	99	75.041	ENSPNYG00000012371	srpra	94	75.530	Pundamilia_nyererei
ENSIPUG00000000867	srpra	99	82.651	ENSPNAG00000013476	srpra	94	83.142	Pygocentrus_nattereri
ENSIPUG00000000867	srpra	99	63.902	ENSRNOG00000010543	Srpra	94	64.228	Rattus_norvegicus
ENSIPUG00000000867	srpra	99	64.830	ENSRBIG00000008702	SRPRA	98	61.675	Rhinopithecus_bieti
ENSIPUG00000000867	srpra	99	64.506	ENSRROG00000029494	SRPRA	98	61.353	Rhinopithecus_roxellana
ENSIPUG00000000867	srpra	53	41.176	YDR292C	-	80	33.269	Saccharomyces_cerevisiae
ENSIPUG00000000867	srpra	99	64.830	ENSSBOG00000035892	SRPRA	98	61.675	Saimiri_boliviensis_boliviensis
ENSIPUG00000000867	srpra	99	63.782	ENSSHAG00000009168	SRPRA	100	63.622	Sarcophilus_harrisii
ENSIPUG00000000867	srpra	99	71.757	ENSSFOG00015008837	srpra	93	71.100	Scleropages_formosus
ENSIPUG00000000867	srpra	99	69.608	ENSSMAG00000002783	srpra	94	69.444	Scophthalmus_maximus
ENSIPUG00000000867	srpra	99	75.285	ENSSDUG00000013920	srpra	93	70.358	Seriola_dumerili
ENSIPUG00000000867	srpra	99	75.203	ENSSLDG00000008601	srpra	88	75.772	Seriola_lalandi_dorsalis
ENSIPUG00000000867	srpra	79	60.692	ENSSARG00000012434	SRPRA	79	61.303	Sorex_araneus
ENSIPUG00000000867	srpra	99	65.161	ENSSPUG00000018221	SRPRA	94	65.539	Sphenodon_punctatus
ENSIPUG00000000867	srpra	99	74.756	ENSSPAG00000005103	srpra	94	75.649	Stegastes_partitus
ENSIPUG00000000867	srpra	99	64.620	ENSSSCG00000015227	SRPRA	94	64.459	Sus_scrofa
ENSIPUG00000000867	srpra	99	64.839	ENSTGUG00000000815	SRPRA	100	64.677	Taeniopygia_guttata
ENSIPUG00000000867	srpra	99	72.712	ENSTRUG00000006856	srpra	94	73.039	Takifugu_rubripes
ENSIPUG00000000867	srpra	99	69.872	ENSTNIG00000010316	srpra	94	69.712	Tetraodon_nigroviridis
ENSIPUG00000000867	srpra	99	64.459	ENSTTRG00000001558	SRPRA	94	64.136	Tursiops_truncatus
ENSIPUG00000000867	srpra	99	63.813	ENSUAMG00000005510	SRPRA	94	64.194	Ursus_americanus
ENSIPUG00000000867	srpra	99	60.577	ENSUMAG00000002269	SRPRA	98	60.543	Ursus_maritimus
ENSIPUG00000000867	srpra	73	92.248	ENSVPAG00000001077	SRPRA	75	92.248	Vicugna_pacos
ENSIPUG00000000867	srpra	99	64.668	ENSVVUG00000020094	SRPRA	94	64.725	Vulpes_vulpes
ENSIPUG00000000867	srpra	99	55.040	ENSXETG00000003920	srpra	94	55.911	Xenopus_tropicalis
ENSIPUG00000000867	srpra	83	92.698	ENSXCOG00000001286	srpra	97	91.718	Xiphophorus_couchianus
ENSIPUG00000000867	srpra	99	74.677	ENSXMAG00000028401	srpra	94	74.839	Xiphophorus_maculatus