EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000878 (Gene tree)
Gene ID: 108278538
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 16750 bases
Position: chr1:4357997-4374746
Accession: 108278538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001232	PAP_assoc	PF03828.19	2.1e-16	1	1
ENSIPUP00000001224	PAP_assoc	PF03828.19	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001301	-	4213	-	ENSIPUP00000001232	753 (aa)	-	-
ENSIPUT00000001293	-	2576	XM_017492020	ENSIPUP00000001224	770 (aa)	XP_017347509	A0A2D0SXU8

Gene Model

Click here to download ENSIPUG00000000878's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000878	-	57	76.667	ENSIPUG00000015994	tent4b	56	76.667
ENSIPUG00000000878	-	74	62.098	ENSIPUG00000014941	tent4a	95	57.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000878	-	68	62.615	ENSG00000112941	TENT4A	100	74.074	Homo_sapiens
ENSIPUG00000000878	-	98	54.233	ENSAPOG00000002178	tent4a	74	83.784	Acanthochromis_polyacanthus
ENSIPUG00000000878	-	52	72.613	ENSAPOG00000018106	-	57	69.214	Acanthochromis_polyacanthus
ENSIPUG00000000878	-	59	65.733	ENSAMEG00000002806	TENT4A	85	65.733	Ailuropoda_melanoleuca
ENSIPUG00000000878	-	54	66.667	ENSACIG00000013326	tent4a	71	70.640	Amphilophus_citrinellus
ENSIPUG00000000878	-	77	50.845	ENSACIG00000014234	-	69	80.769	Amphilophus_citrinellus
ENSIPUG00000000878	-	89	55.733	ENSAOCG00000019251	tent4a	65	81.081	Amphiprion_ocellaris
ENSIPUG00000000878	-	52	73.367	ENSAOCG00000013501	-	62	66.667	Amphiprion_ocellaris
ENSIPUG00000000878	-	52	73.367	ENSAPEG00000015522	-	62	66.667	Amphiprion_percula
ENSIPUG00000000878	-	89	55.733	ENSAPEG00000002703	tent4a	81	80.178	Amphiprion_percula
ENSIPUG00000000878	-	82	56.105	ENSATEG00000024197	-	50	70.197	Anabas_testudineus
ENSIPUG00000000878	-	89	57.353	ENSATEG00000006898	tent4a	80	80.473	Anabas_testudineus
ENSIPUG00000000878	-	55	67.757	ENSAPLG00000011309	TENT4A	78	76.190	Anas_platyrhynchos
ENSIPUG00000000878	-	54	66.434	ENSACAG00000000497	TENT4A	61	75.375	Anolis_carolinensis
ENSIPUG00000000878	-	71	90.000	ENSANAG00000037806	TENT4A	89	52.342	Aotus_nancymaae
ENSIPUG00000000878	-	54	71.951	ENSACLG00000014408	tent4a	75	71.642	Astatotilapia_calliptera
ENSIPUG00000000878	-	77	53.734	ENSACLG00000016812	-	50	68.460	Astatotilapia_calliptera
ENSIPUG00000000878	-	97	68.212	ENSAMXG00000039964	TENT4A	100	67.742	Astyanax_mexicanus
ENSIPUG00000000878	-	84	87.097	ENSAMXG00000017691	tent4a	70	87.097	Astyanax_mexicanus
ENSIPUG00000000878	-	59	65.011	ENSBTAG00000003381	TENT4A	98	62.525	Bos_taurus
ENSIPUG00000000878	-	59	65.733	ENSCAFG00000010319	TENT4A	85	65.733	Canis_familiaris
ENSIPUG00000000878	-	59	65.733	ENSCAFG00020022835	TENT4A	85	65.733	Canis_lupus_dingo
ENSIPUG00000000878	-	59	64.316	ENSCHIG00000017328	TENT4A	85	64.316	Capra_hircus
ENSIPUG00000000878	-	59	64.871	ENSTSYG00000000631	TENT4A	85	64.871	Carlito_syrichta
ENSIPUG00000000878	-	59	65.086	ENSCAPG00000007792	TENT4A	85	65.086	Cavia_aperea
ENSIPUG00000000878	-	66	61.967	ENSCPOG00000009006	TENT4A	85	65.086	Cavia_porcellus
ENSIPUG00000000878	-	59	64.440	ENSCCAG00000006730	TENT4A	85	64.440	Cebus_capucinus
ENSIPUG00000000878	-	76	56.529	ENSCATG00000034531	TENT4A	89	51.939	Cercocebus_atys
ENSIPUG00000000878	-	59	65.086	ENSCLAG00000003733	TENT4A	85	65.086	Chinchilla_lanigera
ENSIPUG00000000878	-	59	64.655	ENSCSAG00000017336	TENT4A	85	64.655	Chlorocebus_sabaeus
ENSIPUG00000000878	-	81	63.462	ENSCPBG00000006514	TENT4A	100	51.703	Chrysemys_picta_bellii
ENSIPUG00000000878	-	58	64.579	ENSCANG00000022871	TENT4A	85	64.579	Colobus_angolensis_palliatus
ENSIPUG00000000878	-	59	64.502	ENSCGRG00000006274	Tent4a	96	58.550	Cricetulus_griseus_crigri
ENSIPUG00000000878	-	59	64.668	ENSCSEG00000003887	-	51	70.290	Cynoglossus_semilaevis
ENSIPUG00000000878	-	89	55.851	ENSCSEG00000011470	tent4a	89	56.208	Cynoglossus_semilaevis
ENSIPUG00000000878	-	81	57.447	ENSCVAG00000021741	tent4a	57	69.882	Cyprinodon_variegatus
ENSIPUG00000000878	-	75	63.378	ENSDARG00000062114	tent4a	99	62.583	Danio_rerio
ENSIPUG00000000878	-	64	63.689	ENSDNOG00000015096	TENT4A	85	60.573	Dasypus_novemcinctus
ENSIPUG00000000878	-	59	64.756	ENSDORG00000023216	Tent4a	85	64.756	Dipodomys_ordii
ENSIPUG00000000878	-	54	66.353	ENSETEG00000020403	TENT4A	100	66.353	Echinops_telfairi
ENSIPUG00000000878	-	59	65.517	ENSEASG00005018583	TENT4A	85	65.517	Equus_asinus_asinus
ENSIPUG00000000878	-	70	90.000	ENSECAG00000010134	TENT4A	90	55.480	Equus_caballus
ENSIPUG00000000878	-	81	58.174	ENSELUG00000024141	tent4a	74	73.684	Esox_lucius
ENSIPUG00000000878	-	71	90.000	ENSFCAG00000003474	TENT4A	90	54.263	Felis_catus
ENSIPUG00000000878	-	55	67.757	ENSFALG00000007179	TENT4A	78	76.190	Ficedula_albicollis
ENSIPUG00000000878	-	59	65.302	ENSFDAG00000005946	TENT4A	85	65.302	Fukomys_damarensis
ENSIPUG00000000878	-	83	54.638	ENSFHEG00000017843	tent4a	58	70.874	Fundulus_heteroclitus
ENSIPUG00000000878	-	81	51.752	ENSFHEG00000006086	-	64	57.377	Fundulus_heteroclitus
ENSIPUG00000000878	-	78	58.075	ENSGALG00000013061	PAPD7	72	81.433	Gallus_gallus
ENSIPUG00000000878	-	56	71.136	ENSGAFG00000018741	tent4a	50	71.707	Gambusia_affinis
ENSIPUG00000000878	-	60	65.560	ENSGAGG00000017192	TENT4A	81	70.647	Gopherus_agassizii
ENSIPUG00000000878	-	76	57.259	ENSGGOG00000013866	-	84	57.610	Gorilla_gorilla
ENSIPUG00000000878	-	77	53.443	ENSHBUG00000001038	-	50	68.460	Haplochromis_burtoni
ENSIPUG00000000878	-	54	72.482	ENSHBUG00000022127	tent4a	98	56.478	Haplochromis_burtoni
ENSIPUG00000000878	-	70	90.000	ENSHGLG00000005593	TENT4A	85	63.124	Heterocephalus_glaber_female
ENSIPUG00000000878	-	58	63.319	ENSHGLG00100016621	TENT4A	85	63.124	Heterocephalus_glaber_male
ENSIPUG00000000878	-	97	53.300	ENSHCOG00000018008	tent4a	73	62.185	Hippocampus_comes
ENSIPUG00000000878	-	59	65.517	ENSSTOG00000004554	TENT4A	85	65.517	Ictidomys_tridecemlineatus
ENSIPUG00000000878	-	59	64.655	ENSJJAG00000007205	Tent4a	85	64.655	Jaculus_jaculus
ENSIPUG00000000878	-	64	73.171	ENSKMAG00000000725	tent4a	99	68.916	Kryptolebias_marmoratus
ENSIPUG00000000878	-	97	55.852	ENSLOCG00000008727	tent4a	98	55.654	Lepisosteus_oculatus
ENSIPUG00000000878	-	59	64.179	ENSLAFG00000004787	TENT4A	85	64.179	Loxodonta_africana
ENSIPUG00000000878	-	76	57.259	ENSMFAG00000038658	TENT4A	83	56.610	Macaca_fascicularis
ENSIPUG00000000878	-	59	64.655	ENSMLEG00000030994	TENT4A	85	64.655	Mandrillus_leucophaeus
ENSIPUG00000000878	-	78	54.792	ENSMAMG00000024030	-	73	55.446	Mastacembelus_armatus
ENSIPUG00000000878	-	77	61.746	ENSMAMG00000004931	tent4a	89	58.104	Mastacembelus_armatus
ENSIPUG00000000878	-	81	58.507	ENSMZEG00005000080	tent4a	99	60.000	Maylandia_zebra
ENSIPUG00000000878	-	77	53.409	ENSMZEG00005001805	-	50	67.971	Maylandia_zebra
ENSIPUG00000000878	-	67	58.106	ENSMGAG00000006315	TENT4A	100	58.564	Meleagris_gallopavo
ENSIPUG00000000878	-	62	62.041	ENSMAUG00000008017	Tent4a	96	58.595	Mesocricetus_auratus
ENSIPUG00000000878	-	67	58.000	ENSMICG00000016562	TENT4A	89	61.963	Microcebus_murinus
ENSIPUG00000000878	-	59	64.619	ENSMOCG00000008477	Tent4a	96	58.759	Microtus_ochrogaster
ENSIPUG00000000878	-	73	60.291	ENSMMOG00000021181	tent4a	78	74.937	Mola_mola
ENSIPUG00000000878	-	74	64.340	ENSMODG00000002052	TENT4A	68	74.359	Monodelphis_domestica
ENSIPUG00000000878	-	77	55.016	ENSMALG00000018694	-	87	55.684	Monopterus_albus
ENSIPUG00000000878	-	67	63.039	ENSMUSG00000034575	Tent4a	96	58.659	Mus_musculus
ENSIPUG00000000878	-	59	65.086	ENSMPUG00000007530	TENT4A	85	65.086	Mustela_putorius_furo
ENSIPUG00000000878	-	59	65.032	ENSMLUG00000004424	TENT4A	85	65.032	Myotis_lucifugus
ENSIPUG00000000878	-	59	65.086	ENSNGAG00000006352	Tent4a	85	65.086	Nannospalax_galili
ENSIPUG00000000878	-	68	56.538	ENSNLEG00000011434	-	75	56.538	Nomascus_leucogenys
ENSIPUG00000000878	-	59	48.373	ENSMEUG00000004007	TENT4A	96	48.373	Notamacropus_eugenii
ENSIPUG00000000878	-	59	64.516	ENSODEG00000018357	TENT4A	85	64.516	Octodon_degus
ENSIPUG00000000878	-	58	64.629	ENSONIG00000007768	tent4a	83	64.488	Oreochromis_niloticus
ENSIPUG00000000878	-	59	64.935	ENSOANG00000011579	-	97	59.470	Ornithorhynchus_anatinus
ENSIPUG00000000878	-	57	65.132	ENSOCUG00000017025	TENT4A	85	64.516	Oryctolagus_cuniculus
ENSIPUG00000000878	-	67	63.873	ENSORLG00000025175	tent4a	65	65.497	Oryzias_latipes
ENSIPUG00000000878	-	54	66.038	ENSORLG00000027691	-	73	53.512	Oryzias_latipes
ENSIPUG00000000878	-	54	66.033	ENSORLG00020022661	-	52	67.822	Oryzias_latipes_hni
ENSIPUG00000000878	-	59	64.579	ENSORLG00015006327	-	50	68.059	Oryzias_latipes_hsok
ENSIPUG00000000878	-	97	52.152	ENSOMEG00000013540	tent4a	61	60.653	Oryzias_melastigma
ENSIPUG00000000878	-	59	64.655	ENSOGAG00000015032	TENT4A	85	65.021	Otolemur_garnettii
ENSIPUG00000000878	-	59	64.316	ENSOARG00000014904	TENT4A	94	59.280	Ovis_aries
ENSIPUG00000000878	-	59	64.655	ENSPPAG00000034356	TENT4A	85	64.655	Pan_paniscus
ENSIPUG00000000878	-	59	64.516	ENSPPRG00000002409	TENT4A	85	64.871	Panthera_pardus
ENSIPUG00000000878	-	76	57.259	ENSPTRG00000016717	TENT4A	82	60.561	Pan_troglodytes
ENSIPUG00000000878	-	76	56.860	ENSPANG00000004005	TENT4A	83	54.976	Papio_anubis
ENSIPUG00000000878	-	97	55.300	ENSPKIG00000020499	-	98	54.051	Paramormyrops_kingsleyae
ENSIPUG00000000878	-	78	85.185	ENSPKIG00000024130	tent4a	82	85.185	Paramormyrops_kingsleyae
ENSIPUG00000000878	-	67	58.041	ENSPSIG00000015964	TENT4A	100	58.041	Pelodiscus_sinensis
ENSIPUG00000000878	-	57	75.349	ENSPMGG00000004132	tent4a	68	76.060	Periophthalmus_magnuspinnatus
ENSIPUG00000000878	-	54	72.487	ENSPMGG00000007999	TENT4A	68	78.641	Periophthalmus_magnuspinnatus
ENSIPUG00000000878	-	59	64.316	ENSPEMG00000024121	Tent4a	85	64.316	Peromyscus_maniculatus_bairdii
ENSIPUG00000000878	-	81	56.745	ENSPFOG00000003961	tent4a	54	69.976	Poecilia_formosa
ENSIPUG00000000878	-	73	58.627	ENSPFOG00000016762	-	51	70.460	Poecilia_formosa
ENSIPUG00000000878	-	73	59.011	ENSPLAG00000004468	TENT4A	62	83.094	Poecilia_latipinna
ENSIPUG00000000878	-	81	56.891	ENSPLAG00000007134	tent4a	50	71.463	Poecilia_latipinna
ENSIPUG00000000878	-	73	60.141	ENSPMEG00000009954	-	53	70.218	Poecilia_mexicana
ENSIPUG00000000878	-	81	57.059	ENSPMEG00000006428	tent4a	50	71.707	Poecilia_mexicana
ENSIPUG00000000878	-	73	57.923	ENSPREG00000011257	TENT4A	57	71.947	Poecilia_reticulata
ENSIPUG00000000878	-	59	93.103	ENSPREG00000017547	tent4a	66	93.103	Poecilia_reticulata
ENSIPUG00000000878	-	59	64.871	ENSPPYG00000015334	-	85	64.871	Pongo_abelii
ENSIPUG00000000878	-	80	56.299	ENSPCOG00000016295	TENT4A	85	64.655	Propithecus_coquereli
ENSIPUG00000000878	-	59	64.871	ENSPVAG00000000511	TENT4A	85	64.871	Pteropus_vampyrus
ENSIPUG00000000878	-	54	72.019	ENSPNYG00000010769	tent4a	98	57.085	Pundamilia_nyererei
ENSIPUG00000000878	-	97	66.667	ENSPNAG00000011603	TENT4A	99	65.319	Pygocentrus_nattereri
ENSIPUG00000000878	-	68	93.103	ENSPNAG00000026563	tent4a	68	77.143	Pygocentrus_nattereri
ENSIPUG00000000878	-	59	64.859	ENSRNOG00000017613	Tent4a	85	64.859	Rattus_norvegicus
ENSIPUG00000000878	-	59	64.655	ENSRBIG00000027491	TENT4A	85	64.655	Rhinopithecus_bieti
ENSIPUG00000000878	-	59	64.655	ENSRROG00000039864	TENT4A	85	64.655	Rhinopithecus_roxellana
ENSIPUG00000000878	-	59	64.655	ENSSBOG00000035549	TENT4A	85	64.655	Saimiri_boliviensis_boliviensis
ENSIPUG00000000878	-	59	65.517	ENSSHAG00000012100	TENT4A	90	63.211	Sarcophilus_harrisii
ENSIPUG00000000878	-	57	68.233	ENSSFOG00015003516	-	100	61.394	Scleropages_formosus
ENSIPUG00000000878	-	54	77.108	ENSSFOG00015001756	tent4a	85	76.904	Scleropages_formosus
ENSIPUG00000000878	-	56	74.292	ENSSMAG00000020671	tent4a	97	60.801	Scophthalmus_maximus
ENSIPUG00000000878	-	59	65.227	ENSSDUG00000014825	-	50	71.535	Seriola_dumerili
ENSIPUG00000000878	-	89	56.016	ENSSDUG00000002157	tent4a	89	57.028	Seriola_dumerili
ENSIPUG00000000878	-	54	74.882	ENSSLDG00000004371	tent4a	75	74.818	Seriola_lalandi_dorsalis
ENSIPUG00000000878	-	78	57.189	ENSSLDG00000019746	-	50	71.463	Seriola_lalandi_dorsalis
ENSIPUG00000000878	-	50	69.171	ENSSPUG00000008830	TENT4A	79	71.554	Sphenodon_punctatus
ENSIPUG00000000878	-	52	71.000	ENSSPAG00000017401	-	50	69.608	Stegastes_partitus
ENSIPUG00000000878	-	54	74.880	ENSSPAG00000003618	tent4a	74	74.817	Stegastes_partitus
ENSIPUG00000000878	-	71	90.000	ENSSSCG00000017102	TENT4A	90	56.585	Sus_scrofa
ENSIPUG00000000878	-	54	68.224	ENSTGUG00000007771	TENT4A	80	68.224	Taeniopygia_guttata
ENSIPUG00000000878	-	60	83.333	ENSTRUG00000006698	-	58	83.333	Takifugu_rubripes
ENSIPUG00000000878	-	59	53.763	ENSTBEG00000015071	TENT4A	96	53.763	Tupaia_belangeri
ENSIPUG00000000878	-	59	65.368	ENSTTRG00000012547	TENT4A	89	62.834	Tursiops_truncatus
ENSIPUG00000000878	-	60	66.102	ENSUAMG00000024711	TENT4A	81	66.102	Ursus_americanus
ENSIPUG00000000878	-	59	65.727	ENSUMAG00000021088	TENT4A	85	65.727	Ursus_maritimus
ENSIPUG00000000878	-	59	65.733	ENSVVUG00000017702	TENT4A	85	65.733	Vulpes_vulpes
ENSIPUG00000000878	-	53	72.304	ENSXCOG00000002570	tent4a	74	72.250	Xiphophorus_couchianus