EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000902 (Gene tree)
Gene ID: 108272685
Gene Symbol: PRPF3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16504 bases
Position: chr1:4380257-4396760
Accession: 108272685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001380	PRP3	PF08572.10	6.4e-76	1	1
ENSIPUP00000001328	PRP3	PF08572.10	6.6e-76	1	1
ENSIPUP00000001346	PRP3	PF08572.10	6.6e-76	1	1
ENSIPUP00000001328	PWI	PF01480.17	3.9e-13	1	1
ENSIPUP00000001346	PWI	PF01480.17	3.9e-13	1	1
ENSIPUP00000001380	PWI	PF01480.17	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001452	-	2058	-	ENSIPUP00000001380	685 (aa)	-	-
ENSIPUT00000001398	-	7498	XM_017481291	ENSIPUP00000001328	698 (aa)	XP_017336780	W5UCX9
ENSIPUT00000001418	-	7195	-	ENSIPUP00000001346	698 (aa)	-	W5UCX9

Gene Model

Click here to download ENSIPUG00000000902's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000902	PRPF3	99	73.789	ENSG00000117360	PRPF3	100	73.466	Homo_sapiens
ENSIPUG00000000902	PRPF3	100	81.766	ENSAPOG00000015584	prpf3	100	82.194	Acanthochromis_polyacanthus
ENSIPUG00000000902	PRPF3	99	73.647	ENSAMEG00000001630	PRPF3	100	73.324	Ailuropoda_melanoleuca
ENSIPUG00000000902	PRPF3	100	80.791	ENSACIG00000007876	prpf3	100	80.791	Amphilophus_citrinellus
ENSIPUG00000000902	PRPF3	100	80.769	ENSAOCG00000011449	prpf3	100	81.702	Amphiprion_ocellaris
ENSIPUG00000000902	PRPF3	100	81.330	ENSATEG00000023583	prpf3	100	82.336	Anabas_testudineus
ENSIPUG00000000902	PRPF3	99	73.714	ENSAPLG00000002440	PRPF3	100	73.000	Anas_platyrhynchos
ENSIPUG00000000902	PRPF3	99	73.647	ENSACAG00000003176	PRPF3	100	73.647	Anolis_carolinensis
ENSIPUG00000000902	PRPF3	99	73.789	ENSANAG00000026138	PRPF3	100	73.466	Aotus_nancymaae
ENSIPUG00000000902	PRPF3	100	80.857	ENSACLG00000020127	prpf3	100	81.429	Astatotilapia_calliptera
ENSIPUG00000000902	PRPF3	100	86.582	ENSAMXG00000007306	prpf3	100	86.299	Astyanax_mexicanus
ENSIPUG00000000902	PRPF3	99	73.789	ENSBTAG00000013946	PRPF3	100	73.466	Bos_taurus
ENSIPUG00000000902	PRPF3	82	37.913	WBGene00010844	prp-3	96	34.661	Caenorhabditis_elegans
ENSIPUG00000000902	PRPF3	99	73.789	ENSCJAG00000009926	PRPF3	100	73.466	Callithrix_jacchus
ENSIPUG00000000902	PRPF3	99	73.789	ENSCAFG00000011820	PRPF3	100	73.466	Canis_familiaris
ENSIPUG00000000902	PRPF3	81	72.438	ENSCAFG00020019653	PRPF3	100	72.035	Canis_lupus_dingo
ENSIPUG00000000902	PRPF3	99	73.789	ENSCHIG00000015434	PRPF3	100	73.466	Capra_hircus
ENSIPUG00000000902	PRPF3	99	73.894	ENSTSYG00000001383	PRPF3	100	73.609	Carlito_syrichta
ENSIPUG00000000902	PRPF3	97	63.910	ENSCAPG00000017812	PRPF3	99	64.060	Cavia_aperea
ENSIPUG00000000902	PRPF3	99	73.894	ENSCPOG00000008068	PRPF3	100	73.609	Cavia_porcellus
ENSIPUG00000000902	PRPF3	99	73.789	ENSCCAG00000026380	PRPF3	100	73.466	Cebus_capucinus
ENSIPUG00000000902	PRPF3	99	61.810	ENSCATG00000041778	PRPF3	100	61.473	Cercocebus_atys
ENSIPUG00000000902	PRPF3	99	73.932	ENSCLAG00000015009	PRPF3	100	73.609	Chinchilla_lanigera
ENSIPUG00000000902	PRPF3	76	85.401	ENSCHOG00000011645	PRPF3	76	85.401	Choloepus_hoffmanni
ENSIPUG00000000902	PRPF3	99	73.857	ENSCPBG00000008216	PRPF3	100	73.571	Chrysemys_picta_bellii
ENSIPUG00000000902	PRPF3	62	57.746	ENSCING00000003312	-	100	58.711	Ciona_intestinalis
ENSIPUG00000000902	PRPF3	85	51.163	ENSCSAVG00000008720	-	94	52.205	Ciona_savignyi
ENSIPUG00000000902	PRPF3	99	73.219	ENSCANG00000036769	PRPF3	100	72.896	Colobus_angolensis_palliatus
ENSIPUG00000000902	PRPF3	99	73.789	ENSCGRG00001019100	Prpf3	100	73.466	Cricetulus_griseus_chok1gshd
ENSIPUG00000000902	PRPF3	99	73.789	ENSCGRG00000007322	Prpf3	100	73.466	Cricetulus_griseus_crigri
ENSIPUG00000000902	PRPF3	100	80.367	ENSCSEG00000002532	prpf3	100	80.367	Cynoglossus_semilaevis
ENSIPUG00000000902	PRPF3	100	80.000	ENSCVAG00000009318	prpf3	100	80.654	Cyprinodon_variegatus
ENSIPUG00000000902	PRPF3	100	83.048	ENSDARG00000086425	prpf3	100	85.000	Danio_rerio
ENSIPUG00000000902	PRPF3	99	70.043	ENSDNOG00000005904	PRPF3	100	69.857	Dasypus_novemcinctus
ENSIPUG00000000902	PRPF3	93	73.966	ENSDORG00000008664	Prpf3	99	73.733	Dipodomys_ordii
ENSIPUG00000000902	PRPF3	81	52.265	FBgn0036915	Prp3	99	52.847	Drosophila_melanogaster
ENSIPUG00000000902	PRPF3	99	74.359	ENSETEG00000019124	PRPF3	100	74.037	Echinops_telfairi
ENSIPUG00000000902	PRPF3	100	61.507	ENSEBUG00000011680	prpf3	100	61.269	Eptatretus_burgeri
ENSIPUG00000000902	PRPF3	99	73.647	ENSEASG00005001566	PRPF3	100	73.324	Equus_asinus_asinus
ENSIPUG00000000902	PRPF3	99	73.789	ENSECAG00000019840	PRPF3	100	73.466	Equus_caballus
ENSIPUG00000000902	PRPF3	86	74.610	ENSEEUG00000007338	PRPF3	85	75.792	Erinaceus_europaeus
ENSIPUG00000000902	PRPF3	100	74.644	ENSELUG00000013624	prpf3	100	74.610	Esox_lucius
ENSIPUG00000000902	PRPF3	99	73.789	ENSFCAG00000013940	PRPF3	100	73.466	Felis_catus
ENSIPUG00000000902	PRPF3	99	74.217	ENSFDAG00000010365	PRPF3	100	73.894	Fukomys_damarensis
ENSIPUG00000000902	PRPF3	100	78.970	ENSFHEG00000021746	prpf3	100	79.542	Fundulus_heteroclitus
ENSIPUG00000000902	PRPF3	100	79.349	ENSGMOG00000008535	prpf3	100	79.037	Gadus_morhua
ENSIPUG00000000902	PRPF3	99	73.857	ENSGALG00000028205	PRPF3	100	73.143	Gallus_gallus
ENSIPUG00000000902	PRPF3	100	78.521	ENSGAFG00000012671	prpf3	100	78.805	Gambusia_affinis
ENSIPUG00000000902	PRPF3	100	80.567	ENSGACG00000011792	prpf3	100	80.993	Gasterosteus_aculeatus
ENSIPUG00000000902	PRPF3	99	73.714	ENSGAGG00000013765	PRPF3	100	76.114	Gopherus_agassizii
ENSIPUG00000000902	PRPF3	86	80.882	ENSGGOG00000013174	PRPF3	100	80.882	Gorilla_gorilla
ENSIPUG00000000902	PRPF3	100	81.429	ENSHBUG00000003493	prpf3	100	82.000	Haplochromis_burtoni
ENSIPUG00000000902	PRPF3	99	54.208	ENSHGLG00000016033	-	100	53.638	Heterocephalus_glaber_female
ENSIPUG00000000902	PRPF3	99	73.932	ENSHGLG00000016569	PRPF3	100	73.609	Heterocephalus_glaber_female
ENSIPUG00000000902	PRPF3	99	54.043	ENSHGLG00100008951	-	100	53.210	Heterocephalus_glaber_male
ENSIPUG00000000902	PRPF3	99	73.932	ENSHGLG00100007590	PRPF3	100	73.609	Heterocephalus_glaber_male
ENSIPUG00000000902	PRPF3	100	75.527	ENSHCOG00000014058	prpf3	100	76.771	Hippocampus_comes
ENSIPUG00000000902	PRPF3	99	73.789	ENSSTOG00000001889	PRPF3	100	73.466	Ictidomys_tridecemlineatus
ENSIPUG00000000902	PRPF3	100	80.398	ENSKMAG00000001390	prpf3	100	80.966	Kryptolebias_marmoratus
ENSIPUG00000000902	PRPF3	100	81.612	ENSLBEG00000026310	prpf3	100	82.178	Labrus_bergylta
ENSIPUG00000000902	PRPF3	93	69.219	ENSLACG00000010541	PRPF3	100	68.865	Latimeria_chalumnae
ENSIPUG00000000902	PRPF3	99	73.789	ENSLAFG00000004713	PRPF3	100	73.466	Loxodonta_africana
ENSIPUG00000000902	PRPF3	99	73.789	ENSMFAG00000039791	PRPF3	100	73.466	Macaca_fascicularis
ENSIPUG00000000902	PRPF3	90	73.408	ENSMMUG00000016301	PRPF3	97	73.046	Macaca_mulatta
ENSIPUG00000000902	PRPF3	99	73.789	ENSMNEG00000038161	PRPF3	100	73.466	Macaca_nemestrina
ENSIPUG00000000902	PRPF3	98	49.856	ENSMLEG00000041065	-	97	49.785	Mandrillus_leucophaeus
ENSIPUG00000000902	PRPF3	86	80.882	ENSMLEG00000040609	PRPF3	100	80.882	Mandrillus_leucophaeus
ENSIPUG00000000902	PRPF3	100	81.445	ENSMAMG00000014968	prpf3	100	81.392	Mastacembelus_armatus
ENSIPUG00000000902	PRPF3	100	81.161	ENSMZEG00005015970	prpf3	96	92.391	Maylandia_zebra
ENSIPUG00000000902	PRPF3	99	73.857	ENSMGAG00000000707	PRPF3	100	73.143	Meleagris_gallopavo
ENSIPUG00000000902	PRPF3	99	73.789	ENSMAUG00000017112	Prpf3	100	73.466	Mesocricetus_auratus
ENSIPUG00000000902	PRPF3	99	73.466	ENSMICG00000015386	PRPF3	100	76.335	Microcebus_murinus
ENSIPUG00000000902	PRPF3	99	73.789	ENSMOCG00000000242	Prpf3	100	73.466	Microtus_ochrogaster
ENSIPUG00000000902	PRPF3	100	75.740	ENSMMOG00000016131	prpf3	100	76.869	Mola_mola
ENSIPUG00000000902	PRPF3	99	73.752	ENSMODG00000018774	PRPF3	100	73.429	Monodelphis_domestica
ENSIPUG00000000902	PRPF3	100	79.603	ENSMALG00000007257	prpf3	100	79.603	Monopterus_albus
ENSIPUG00000000902	PRPF3	99	73.609	MGP_CAROLIEiJ_G0025354	Prpf3	100	73.324	Mus_caroli
ENSIPUG00000000902	PRPF3	99	73.609	ENSMUSG00000015748	Prpf3	100	73.324	Mus_musculus
ENSIPUG00000000902	PRPF3	99	73.609	MGP_PahariEiJ_G0026798	Prpf3	100	73.466	Mus_pahari
ENSIPUG00000000902	PRPF3	99	73.609	MGP_SPRETEiJ_G0026298	Prpf3	100	73.324	Mus_spretus
ENSIPUG00000000902	PRPF3	99	72.040	ENSMPUG00000005080	PRPF3	100	71.714	Mustela_putorius_furo
ENSIPUG00000000902	PRPF3	99	74.111	ENSMLUG00000004646	-	100	73.789	Myotis_lucifugus
ENSIPUG00000000902	PRPF3	99	73.789	ENSNGAG00000000910	Prpf3	100	73.466	Nannospalax_galili
ENSIPUG00000000902	PRPF3	100	80.785	ENSNBRG00000003462	prpf3	100	81.346	Neolamprologus_brichardi
ENSIPUG00000000902	PRPF3	90	73.408	ENSNLEG00000009841	PRPF3	99	73.046	Nomascus_leucogenys
ENSIPUG00000000902	PRPF3	83	66.372	ENSMEUG00000008733	PRPF3	89	66.372	Notamacropus_eugenii
ENSIPUG00000000902	PRPF3	99	73.932	ENSOPRG00000010139	PRPF3	100	73.609	Ochotona_princeps
ENSIPUG00000000902	PRPF3	99	55.696	ENSODEG00000014412	-	100	55.134	Octodon_degus
ENSIPUG00000000902	PRPF3	99	73.894	ENSODEG00000011363	-	100	73.609	Octodon_degus
ENSIPUG00000000902	PRPF3	100	81.728	ENSONIG00000006394	prpf3	100	82.011	Oreochromis_niloticus
ENSIPUG00000000902	PRPF3	99	55.887	ENSOANG00000015441	PRPF3	100	55.887	Ornithorhynchus_anatinus
ENSIPUG00000000902	PRPF3	99	73.789	ENSOCUG00000011760	PRPF3	100	73.466	Oryctolagus_cuniculus
ENSIPUG00000000902	PRPF3	100	79.772	ENSORLG00000010330	prpf3	100	79.630	Oryzias_latipes
ENSIPUG00000000902	PRPF3	100	79.772	ENSORLG00020009054	prpf3	100	79.630	Oryzias_latipes_hni
ENSIPUG00000000902	PRPF3	100	79.630	ENSORLG00015015016	prpf3	100	79.487	Oryzias_latipes_hsok
ENSIPUG00000000902	PRPF3	100	80.199	ENSOMEG00000000940	prpf3	100	80.057	Oryzias_melastigma
ENSIPUG00000000902	PRPF3	99	69.688	ENSOGAG00000005352	PRPF3	100	69.362	Otolemur_garnettii
ENSIPUG00000000902	PRPF3	99	73.789	ENSOARG00000020798	PRPF3	100	73.466	Ovis_aries
ENSIPUG00000000902	PRPF3	99	73.647	ENSPPAG00000030983	PRPF3	100	73.324	Pan_paniscus
ENSIPUG00000000902	PRPF3	98	57.308	ENSPPAG00000043769	-	99	56.667	Pan_paniscus
ENSIPUG00000000902	PRPF3	99	73.789	ENSPPRG00000000731	PRPF3	100	73.466	Panthera_pardus
ENSIPUG00000000902	PRPF3	99	73.789	ENSPTIG00000005516	PRPF3	100	73.466	Panthera_tigris_altaica
ENSIPUG00000000902	PRPF3	99	73.789	ENSPTRG00000001254	PRPF3	100	73.466	Pan_troglodytes
ENSIPUG00000000902	PRPF3	98	56.585	ENSPTRG00000047819	-	99	55.942	Pan_troglodytes
ENSIPUG00000000902	PRPF3	99	73.932	ENSPANG00000000499	PRPF3	100	73.609	Papio_anubis
ENSIPUG00000000902	PRPF3	100	82.286	ENSPKIG00000010501	prpf3	100	82.286	Paramormyrops_kingsleyae
ENSIPUG00000000902	PRPF3	99	73.677	ENSPSIG00000014877	PRPF3	100	73.391	Pelodiscus_sinensis
ENSIPUG00000000902	PRPF3	100	70.857	ENSPMGG00000007776	prpf3	100	70.815	Periophthalmus_magnuspinnatus
ENSIPUG00000000902	PRPF3	99	73.789	ENSPEMG00000011672	Prpf3	100	73.466	Peromyscus_maniculatus_bairdii
ENSIPUG00000000902	PRPF3	64	71.396	ENSPMAG00000005588	prpf3	99	71.239	Petromyzon_marinus
ENSIPUG00000000902	PRPF3	99	73.752	ENSPCIG00000008795	PRPF3	100	73.429	Phascolarctos_cinereus
ENSIPUG00000000902	PRPF3	100	78.612	ENSPFOG00000013638	prpf3	100	79.007	Poecilia_formosa
ENSIPUG00000000902	PRPF3	100	78.663	ENSPLAG00000018103	prpf3	100	79.232	Poecilia_latipinna
ENSIPUG00000000902	PRPF3	100	78.805	ENSPMEG00000023546	prpf3	100	79.374	Poecilia_mexicana
ENSIPUG00000000902	PRPF3	100	78.663	ENSPREG00000017216	prpf3	100	79.232	Poecilia_reticulata
ENSIPUG00000000902	PRPF3	76	63.722	ENSPPYG00000018646	-	99	63.277	Pongo_abelii
ENSIPUG00000000902	PRPF3	93	72.630	ENSPPYG00000000900	PRPF3	99	72.282	Pongo_abelii
ENSIPUG00000000902	PRPF3	87	75.082	ENSPCAG00000014908	PRPF3	87	74.713	Procavia_capensis
ENSIPUG00000000902	PRPF3	99	73.647	ENSPCOG00000013828	PRPF3	100	73.324	Propithecus_coquereli
ENSIPUG00000000902	PRPF3	99	73.362	ENSPVAG00000013472	PRPF3	100	73.039	Pteropus_vampyrus
ENSIPUG00000000902	PRPF3	100	81.429	ENSPNYG00000004279	prpf3	100	82.000	Pundamilia_nyererei
ENSIPUG00000000902	PRPF3	100	87.429	ENSPNAG00000001799	prpf3	100	87.147	Pygocentrus_nattereri
ENSIPUG00000000902	PRPF3	99	73.752	ENSRNOG00000025629	Prpf3	100	73.466	Rattus_norvegicus
ENSIPUG00000000902	PRPF3	81	79.412	ENSRBIG00000028854	PRPF3	99	79.412	Rhinopithecus_bieti
ENSIPUG00000000902	PRPF3	99	73.789	ENSRROG00000027464	PRPF3	100	73.466	Rhinopithecus_roxellana
ENSIPUG00000000902	PRPF3	99	67.379	ENSSBOG00000033104	PRPF3	100	67.047	Saimiri_boliviensis_boliviensis
ENSIPUG00000000902	PRPF3	99	73.647	ENSSHAG00000009548	PRPF3	100	73.324	Sarcophilus_harrisii
ENSIPUG00000000902	PRPF3	100	83.099	ENSSFOG00015022014	prpf3	100	83.099	Scleropages_formosus
ENSIPUG00000000902	PRPF3	100	79.887	ENSSMAG00000015739	prpf3	100	80.169	Scophthalmus_maximus
ENSIPUG00000000902	PRPF3	100	79.345	ENSSDUG00000006840	prpf3	100	78.917	Seriola_dumerili
ENSIPUG00000000902	PRPF3	100	81.627	ENSSLDG00000015423	prpf3	100	82.188	Seriola_lalandi_dorsalis
ENSIPUG00000000902	PRPF3	99	73.752	ENSSARG00000011064	PRPF3	100	73.429	Sorex_araneus
ENSIPUG00000000902	PRPF3	99	72.676	ENSSPUG00000000809	PRPF3	100	72.817	Sphenodon_punctatus
ENSIPUG00000000902	PRPF3	100	81.960	ENSSPAG00000018721	prpf3	100	82.244	Stegastes_partitus
ENSIPUG00000000902	PRPF3	99	73.789	ENSSSCG00000030119	PRPF3	100	76.690	Sus_scrofa
ENSIPUG00000000902	PRPF3	99	63.158	ENSTGUG00000004552	PRPF3	100	62.926	Taeniopygia_guttata
ENSIPUG00000000902	PRPF3	100	77.240	ENSTRUG00000014923	prpf3	100	77.240	Takifugu_rubripes
ENSIPUG00000000902	PRPF3	99	77.949	ENSTNIG00000008058	prpf3	100	77.949	Tetraodon_nigroviridis
ENSIPUG00000000902	PRPF3	83	73.051	ENSTBEG00000014072	PRPF3	88	75.566	Tupaia_belangeri
ENSIPUG00000000902	PRPF3	99	68.661	ENSTTRG00000010616	PRPF3	100	68.331	Tursiops_truncatus
ENSIPUG00000000902	PRPF3	80	76.909	ENSUAMG00000009345	PRPF3	100	76.690	Ursus_americanus
ENSIPUG00000000902	PRPF3	99	73.789	ENSUMAG00000003720	PRPF3	100	73.466	Ursus_maritimus
ENSIPUG00000000902	PRPF3	90	78.842	ENSVPAG00000005425	PRPF3	89	80.090	Vicugna_pacos
ENSIPUG00000000902	PRPF3	99	73.789	ENSVVUG00000007933	PRPF3	100	73.466	Vulpes_vulpes
ENSIPUG00000000902	PRPF3	99	72.727	ENSXETG00000018654	prpf3	100	72.650	Xenopus_tropicalis
ENSIPUG00000000902	PRPF3	100	78.947	ENSXMAG00000016347	prpf3	100	79.516	Xiphophorus_maculatus