EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000000971 (Gene tree)
Gene ID
108272098
Gene Symbol
trnt1
Alias
zgc:86645
Full Name
tRNA nucleotidyl transferase 1
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
10811 bases
Position
chr11:23468187-23478997
Accession
108272098
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000001365PolyA_polPF01743.203.2e-3411
ENSIPUP00000001374PolyA_polPF01743.203.2e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000001436-6562XM_017480272ENSIPUP00000001365431 (aa)XP_017335761A0A2D0RZZ9
ENSIPUT00000001446-4575XM_017480274ENSIPUP00000001374431 (aa)XP_017335763A0A2D0RZZ9
Gene Model
Click here to download ENSIPUG00000000971's gene model file
Pathways
Pathway IDPathway NameSource
ipu03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000971's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000000971trnt19768.029ENSG00000072756TRNT19668.029Homo_sapiens
ENSIPUG00000000971trnt19973.893ENSAPOG00000013687trnt19973.893Acanthochromis_polyacanthus
ENSIPUG00000000971trnt19767.943ENSAMEG00000014520TRNT19667.943Ailuropoda_melanoleuca
ENSIPUG00000000971trnt19977.103ENSACIG00000021706trnt19977.103Amphilophus_citrinellus
ENSIPUG00000000971trnt19975.234ENSAOCG00000024612trnt19975.234Amphiprion_ocellaris
ENSIPUG00000000971trnt19967.681ENSAPEG00000022627trnt19967.681Amphiprion_percula
ENSIPUG00000000971trnt19379.851ENSATEG00000008928trnt19979.851Anabas_testudineus
ENSIPUG00000000971trnt19067.700ENSAPLG00000004258TRNT19667.700Anas_platyrhynchos
ENSIPUG00000000971trnt19567.561ENSACAG00000005657TRNT19467.561Anolis_carolinensis
ENSIPUG00000000971trnt19768.029ENSANAG00000024802TRNT19668.029Aotus_nancymaae
ENSIPUG00000000971trnt19977.336ENSACLG00000022227trnt19977.336Astatotilapia_calliptera
ENSIPUG00000000971trnt110084.223ENSAMXG00000003960trnt110084.223Astyanax_mexicanus
ENSIPUG00000000971trnt19767.067ENSBTAG00000019534TRNT19667.067Bos_taurus
ENSIPUG00000000971trnt19343.521WBGene00010089hpo-319343.521Caenorhabditis_elegans
ENSIPUG00000000971trnt19767.788ENSCJAG00000015466TRNT19667.788Callithrix_jacchus
ENSIPUG00000000971trnt19768.269ENSCAFG00000005985TRNT19568.269Canis_familiaris
ENSIPUG00000000971trnt19768.269ENSCAFG00020014746TRNT19568.269Canis_lupus_dingo
ENSIPUG00000000971trnt19767.788ENSCHIG00000007030TRNT19567.788Capra_hircus
ENSIPUG00000000971trnt19965.893ENSTSYG00000013390TRNT19965.893Carlito_syrichta
ENSIPUG00000000971trnt18756.117ENSCAPG00000006891TRNT19956.117Cavia_aperea
ENSIPUG00000000971trnt19667.711ENSCPOG00000007849TRNT19667.711Cavia_porcellus
ENSIPUG00000000971trnt19268.593ENSCCAG00000002919TRNT19968.354Cebus_capucinus
ENSIPUG00000000971trnt19669.157ENSCATG00000031985TRNT19569.157Cercocebus_atys
ENSIPUG00000000971trnt19667.711ENSCLAG00000005186TRNT19667.711Chinchilla_lanigera
ENSIPUG00000000971trnt19768.750ENSCSAG00000011052TRNT19668.750Chlorocebus_sabaeus
ENSIPUG00000000971trnt18175.000ENSCHOG00000005712TRNT18175.000Choloepus_hoffmanni
ENSIPUG00000000971trnt19567.726ENSCPBG00000017636TRNT19367.726Chrysemys_picta_bellii
ENSIPUG00000000971trnt19441.912ENSCING00000007069-10041.912Ciona_intestinalis
ENSIPUG00000000971trnt19442.752ENSCSAVG00000007494-9542.752Ciona_savignyi
ENSIPUG00000000971trnt19768.510ENSCANG00000039030TRNT19668.510Colobus_angolensis_palliatus
ENSIPUG00000000971trnt19965.581ENSCGRG00001009998Trnt19965.581Cricetulus_griseus_chok1gshd
ENSIPUG00000000971trnt19965.581ENSCGRG00000013410Trnt19770.388Cricetulus_griseus_crigri
ENSIPUG00000000971trnt19974.533ENSCSEG00000008157trnt19974.533Cynoglossus_semilaevis
ENSIPUG00000000971trnt19679.036ENSCVAG00000019770trnt19779.036Cyprinodon_variegatus
ENSIPUG00000000971trnt110082.367ENSDARG00000075297trnt110082.367Danio_rerio
ENSIPUG00000000971trnt19768.269ENSDNOG00000008837TRNT19668.269Dasypus_novemcinctus
ENSIPUG00000000971trnt19569.756ENSDORG00000014035Trnt19469.756Dipodomys_ordii
ENSIPUG00000000971trnt19348.515FBgn0037369CG21008348.515Drosophila_melanogaster
ENSIPUG00000000971trnt15872.289ENSETEG00000018177TRNT110072.289Echinops_telfairi
ENSIPUG00000000971trnt19464.444ENSEBUG00000012779-9564.444Eptatretus_burgeri
ENSIPUG00000000971trnt19767.788ENSEASG00005003577TRNT19667.788Equus_asinus_asinus
ENSIPUG00000000971trnt19768.029ENSECAG00000014420TRNT19668.029Equus_caballus
ENSIPUG00000000971trnt19568.627ENSEEUG00000009567TRNT19468.627Erinaceus_europaeus
ENSIPUG00000000971trnt110077.494ENSELUG00000003802trnt110077.494Esox_lucius
ENSIPUG00000000971trnt19768.269ENSFCAG00000026805TRNT19568.269Felis_catus
ENSIPUG00000000971trnt18968.750ENSFALG00000013539TRNT19968.750Ficedula_albicollis
ENSIPUG00000000971trnt19865.734ENSFDAG00000018412TRNT19965.734Fukomys_damarensis
ENSIPUG00000000971trnt19976.636ENSFHEG00000019294trnt19976.636Fundulus_heteroclitus
ENSIPUG00000000971trnt19975.701ENSGMOG00000007460trnt110075.701Gadus_morhua
ENSIPUG00000000971trnt19965.358ENSGALG00000017368TRNT19965.358Gallus_gallus
ENSIPUG00000000971trnt19976.402ENSGAFG00000008647trnt19976.402Gambusia_affinis
ENSIPUG00000000971trnt19977.570ENSGACG00000011903trnt19977.570Gasterosteus_aculeatus
ENSIPUG00000000971trnt19867.217ENSGAGG00000020942TRNT19667.217Gopherus_agassizii
ENSIPUG00000000971trnt19768.269ENSGGOG00000015286TRNT19668.269Gorilla_gorilla
ENSIPUG00000000971trnt19977.570ENSHBUG00000002797trnt19977.570Haplochromis_burtoni
ENSIPUG00000000971trnt19667.952ENSHGLG00000003649TRNT19667.952Heterocephalus_glaber_female
ENSIPUG00000000971trnt19862.295ENSHGLG00000000221-9862.295Heterocephalus_glaber_female
ENSIPUG00000000971trnt19666.747ENSHGLG00100016421TRNT19666.747Heterocephalus_glaber_male
ENSIPUG00000000971trnt19972.897ENSHCOG00000010618trnt19972.897Hippocampus_comes
ENSIPUG00000000971trnt19966.279ENSSTOG00000000150TRNT19672.362Ictidomys_tridecemlineatus
ENSIPUG00000000971trnt19768.269ENSJJAG00000018561Trnt19668.269Jaculus_jaculus
ENSIPUG00000000971trnt19974.766ENSKMAG00000011307trnt19974.766Kryptolebias_marmoratus
ENSIPUG00000000971trnt19970.258ENSLBEG00000019457trnt110070.258Labrus_bergylta
ENSIPUG00000000971trnt19870.824ENSLACG00000013227TRNT19870.824Latimeria_chalumnae
ENSIPUG00000000971trnt19973.256ENSLOCG00000011105trnt19873.256Lepisosteus_oculatus
ENSIPUG00000000971trnt19767.788ENSLAFG00000023191TRNT19667.788Loxodonta_africana
ENSIPUG00000000971trnt19669.157ENSMFAG00000045113TRNT19569.157Macaca_fascicularis
ENSIPUG00000000971trnt19669.157ENSMMUG00000017983TRNT19569.157Macaca_mulatta
ENSIPUG00000000971trnt19669.157ENSMNEG00000037805TRNT19569.157Macaca_nemestrina
ENSIPUG00000000971trnt18870.866ENSMLEG00000033671TRNT19970.866Mandrillus_leucophaeus
ENSIPUG00000000971trnt19975.701ENSMAMG00000023401trnt19975.701Mastacembelus_armatus
ENSIPUG00000000971trnt19977.336ENSMZEG00005009141trnt19977.336Maylandia_zebra
ENSIPUG00000000971trnt17465.625ENSMGAG00000009971TRNT19965.625Meleagris_gallopavo
ENSIPUG00000000971trnt19966.047ENSMAUG00000020707Trnt19966.047Mesocricetus_auratus
ENSIPUG00000000971trnt19768.750ENSMICG00000016615TRNT19668.750Microcebus_murinus
ENSIPUG00000000971trnt19966.279ENSMOCG00000004539Trnt19966.279Microtus_ochrogaster
ENSIPUG00000000971trnt19675.787ENSMMOG00000010742trnt19775.787Mola_mola
ENSIPUG00000000971trnt19767.548ENSMODG00000004368TRNT19667.548Monodelphis_domestica
ENSIPUG00000000971trnt19973.832ENSMALG00000008376trnt19973.832Monopterus_albus
ENSIPUG00000000971trnt19966.512MGP_CAROLIEiJ_G0028698Trnt19771.212Mus_caroli
ENSIPUG00000000971trnt19966.512ENSMUSG00000013736Trnt19373.367Mus_musculus
ENSIPUG00000000971trnt19967.436MGP_PahariEiJ_G0022449Trnt19973.762Mus_pahari
ENSIPUG00000000971trnt19966.279MGP_SPRETEiJ_G0029726Trnt19373.367Mus_spretus
ENSIPUG00000000971trnt19768.029ENSMPUG00000017017TRNT19568.029Mustela_putorius_furo
ENSIPUG00000000971trnt19069.948ENSMLUG00000011864TRNT110069.948Myotis_lucifugus
ENSIPUG00000000971trnt19966.279ENSNGAG00000000537Trnt19966.279Nannospalax_galili
ENSIPUG00000000971trnt18176.791ENSNBRG00000023606trnt19976.791Neolamprologus_brichardi
ENSIPUG00000000971trnt19768.510ENSNLEG00000003226TRNT19668.510Nomascus_leucogenys
ENSIPUG00000000971trnt19766.827ENSMEUG00000004684TRNT19666.827Notamacropus_eugenii
ENSIPUG00000000971trnt18966.319ENSOPRG00000015067TRNT19966.319Ochotona_princeps
ENSIPUG00000000971trnt19668.193ENSODEG00000007597TRNT19668.193Octodon_degus
ENSIPUG00000000971trnt19978.037ENSONIG00000020273trnt19878.037Oreochromis_niloticus
ENSIPUG00000000971trnt19963.551ENSOANG00000007514TRNT19863.551Ornithorhynchus_anatinus
ENSIPUG00000000971trnt19767.225ENSOCUG00000008580TRNT19767.225Oryctolagus_cuniculus
ENSIPUG00000000971trnt19575.061ENSORLG00000003165trnt19775.061Oryzias_latipes
ENSIPUG00000000971trnt19575.306ENSORLG00020022060trnt19775.306Oryzias_latipes_hni
ENSIPUG00000000971trnt19575.061ENSORLG00015018915trnt19675.061Oryzias_latipes_hsok
ENSIPUG00000000971trnt19971.028ENSOMEG00000003331trnt19971.028Oryzias_melastigma
ENSIPUG00000000971trnt19767.788ENSOARG00000008631TRNT19567.788Ovis_aries
ENSIPUG00000000971trnt19768.029ENSPPAG00000043566TRNT19668.029Pan_paniscus
ENSIPUG00000000971trnt19667.952ENSPPRG00000001327TRNT19567.952Panthera_pardus
ENSIPUG00000000971trnt19768.029ENSPTIG00000011448TRNT19568.029Panthera_tigris_altaica
ENSIPUG00000000971trnt19768.029ENSPTRG00000014564TRNT19668.029Pan_troglodytes
ENSIPUG00000000971trnt19669.157ENSPANG00000025944TRNT19569.157Papio_anubis
ENSIPUG00000000971trnt110076.852ENSPKIG00000020015trnt110076.852Paramormyrops_kingsleyae
ENSIPUG00000000971trnt19268.766ENSPSIG00000017356TRNT19970.391Pelodiscus_sinensis
ENSIPUG00000000971trnt19972.430ENSPMGG00000008888trnt19872.430Periophthalmus_magnuspinnatus
ENSIPUG00000000971trnt19965.814ENSPEMG00000019845Trnt19965.814Peromyscus_maniculatus_bairdii
ENSIPUG00000000971trnt19768.029ENSPCIG00000030436TRNT19668.029Phascolarctos_cinereus
ENSIPUG00000000971trnt19876.596ENSPFOG00000006194trnt19876.596Poecilia_formosa
ENSIPUG00000000971trnt19478.624ENSPLAG00000015623trnt19978.856Poecilia_latipinna
ENSIPUG00000000971trnt19976.636ENSPMEG00000012216trnt19979.104Poecilia_mexicana
ENSIPUG00000000971trnt19975.701ENSPREG00000021470trnt19975.701Poecilia_reticulata
ENSIPUG00000000971trnt19768.029ENSPPYG00000013702TRNT19668.029Pongo_abelii
ENSIPUG00000000971trnt18970.496ENSPCAG00000001951TRNT110070.496Procavia_capensis
ENSIPUG00000000971trnt19966.821ENSPCOG00000022228TRNT19966.821Propithecus_coquereli
ENSIPUG00000000971trnt18969.271ENSPVAG00000008784TRNT110069.271Pteropus_vampyrus
ENSIPUG00000000971trnt19977.336ENSPNYG00000003120trnt19977.336Pundamilia_nyererei
ENSIPUG00000000971trnt110084.223ENSPNAG00000000565trnt110084.223Pygocentrus_nattereri
ENSIPUG00000000971trnt19966.282ENSRNOG00000006432Trnt19966.282Rattus_norvegicus
ENSIPUG00000000971trnt19767.788ENSRBIG00000042632TRNT19667.788Rhinopithecus_bieti
ENSIPUG00000000971trnt19768.510ENSRROG00000036866TRNT19668.510Rhinopithecus_roxellana
ENSIPUG00000000971trnt19767.788ENSSBOG00000021208TRNT19667.788Saimiri_boliviensis_boliviensis
ENSIPUG00000000971trnt19568.537ENSSHAG00000018861TRNT19468.537Sarcophilus_harrisii
ENSIPUG00000000971trnt19975.174ENSSFOG00015020844trnt19975.174Scleropages_formosus
ENSIPUG00000000971trnt19976.402ENSSMAG00000015432trnt19776.402Scophthalmus_maximus
ENSIPUG00000000971trnt19977.103ENSSDUG00000012320trnt19977.103Seriola_dumerili
ENSIPUG00000000971trnt19976.636ENSSLDG00000009325trnt19976.636Seriola_lalandi_dorsalis
ENSIPUG00000000971trnt15573.640ENSSLDG00000016463-9173.640Seriola_lalandi_dorsalis
ENSIPUG00000000971trnt18969.713ENSSPUG00000014153TRNT19969.713Sphenodon_punctatus
ENSIPUG00000000971trnt19974.065ENSSPAG00000021005trnt19974.065Stegastes_partitus
ENSIPUG00000000971trnt19767.788ENSSSCG00000011529TRNT19667.788Sus_scrofa
ENSIPUG00000000971trnt19467.654ENSTGUG00000010192TRNT19967.654Taeniopygia_guttata
ENSIPUG00000000971trnt19975.935ENSTRUG00000001088trnt19975.935Takifugu_rubripes
ENSIPUG00000000971trnt19677.349ENSTNIG00000007363trnt19677.349Tetraodon_nigroviridis
ENSIPUG00000000971trnt16159.316ENSTBEG00000006367TRNT18659.316Tupaia_belangeri
ENSIPUG00000000971trnt19766.587ENSTTRG00000007803TRNT19666.587Tursiops_truncatus
ENSIPUG00000000971trnt19768.510ENSUAMG00000022574TRNT19568.510Ursus_americanus
ENSIPUG00000000971trnt19768.510ENSUMAG00000024092TRNT19568.510Ursus_maritimus
ENSIPUG00000000971trnt19768.269ENSVVUG00000012810TRNT19568.269Vulpes_vulpes
ENSIPUG00000000971trnt19462.592ENSXETG00000025091trnt19963.184Xenopus_tropicalis
ENSIPUG00000000971trnt19976.168ENSXCOG00000010150trnt19976.168Xiphophorus_couchianus
ENSIPUG00000000971trnt19976.402ENSXMAG00000002227trnt19976.402Xiphophorus_maculatus

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