EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 3457 bases
Position: chr13:147600-151056
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001370	RVT_1	PF00078.27	1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001442	-	1173	-	ENSIPUP00000001370	390 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000000982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000982	-	65	81.102	ENSIPUG00000002922	-	65	81.102
ENSIPUG00000000982	-	66	91.860	ENSIPUG00000005007	-	71	92.941
ENSIPUG00000000982	-	66	90.347	ENSIPUG00000013500	-	66	91.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000982	-	69	48.519	ENSAPEG00000022086	-	59	47.222	Amphiprion_percula
ENSIPUG00000000982	-	66	47.266	ENSORLG00020003735	-	59	48.117	Oryzias_latipes_hni
ENSIPUG00000000982	-	63	46.311	ENSORLG00020009713	-	61	46.444	Oryzias_latipes_hni
ENSIPUG00000000982	-	70	50.735	ENSSFOG00015014491	-	59	51.765	Scleropages_formosus
ENSIPUG00000000982	-	70	51.103	ENSSFOG00015000428	-	62	52.569	Scleropages_formosus
ENSIPUG00000000982	-	70	49.632	ENSSFOG00015015781	-	65	50.588	Scleropages_formosus