EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001087 (Gene tree)
Gene ID: 108266227
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 19539 bases
Position: chr6:18648961-18668499
Accession: 108266227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001556	TUDOR	PF00567.24	1.5e-77	1	5
ENSIPUP00000001556	TUDOR	PF00567.24	1.5e-77	2	5
ENSIPUP00000001556	TUDOR	PF00567.24	1.5e-77	3	5
ENSIPUP00000001556	TUDOR	PF00567.24	1.5e-77	4	5
ENSIPUP00000001556	TUDOR	PF00567.24	1.5e-77	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001631	-	4221	XM_017469272	ENSIPUP00000001556	1406 (aa)	XP_017324761	-

Gene Model

Click here to download ENSIPUG00000001087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001087	rnf17	90	35.516	ENSG00000132972	RNF17	99	36.787	Homo_sapiens
ENSIPUG00000001087	rnf17	93	44.274	ENSAPOG00000017034	rnf17	96	44.767	Acanthochromis_polyacanthus
ENSIPUG00000001087	rnf17	80	34.943	ENSAMEG00000017340	RNF17	74	35.270	Ailuropoda_melanoleuca
ENSIPUG00000001087	rnf17	92	50.806	ENSAOCG00000018283	rnf17	87	50.891	Amphiprion_ocellaris
ENSIPUG00000001087	rnf17	93	46.450	ENSAPEG00000022338	rnf17	96	46.375	Amphiprion_percula
ENSIPUG00000001087	rnf17	87	50.916	ENSATEG00000002067	rnf17	92	50.916	Anabas_testudineus
ENSIPUG00000001087	rnf17	79	33.746	ENSAPLG00000003969	RNF17	83	33.746	Anas_platyrhynchos
ENSIPUG00000001087	rnf17	79	34.963	ENSACAG00000001418	RNF17	75	34.963	Anolis_carolinensis
ENSIPUG00000001087	rnf17	82	37.198	ENSANAG00000029969	RNF17	93	32.750	Aotus_nancymaae
ENSIPUG00000001087	rnf17	92	49.662	ENSACLG00000018279	rnf17	86	49.662	Astatotilapia_calliptera
ENSIPUG00000001087	rnf17	93	67.378	ENSAMXG00000011002	rnf17	99	66.873	Astyanax_mexicanus
ENSIPUG00000001087	rnf17	80	35.691	ENSCJAG00000018937	RNF17	99	37.858	Callithrix_jacchus
ENSIPUG00000001087	rnf17	77	34.638	ENSCAFG00000007418	RNF17	78	34.848	Canis_familiaris
ENSIPUG00000001087	rnf17	91	33.054	ENSCHIG00000026716	RNF17	99	36.377	Capra_hircus
ENSIPUG00000001087	rnf17	90	34.829	ENSTSYG00000000365	RNF17	99	35.022	Carlito_syrichta
ENSIPUG00000001087	rnf17	80	35.434	ENSCCAG00000026725	RNF17	99	36.771	Cebus_capucinus
ENSIPUG00000001087	rnf17	80	35.755	ENSCATG00000040352	RNF17	99	36.937	Cercocebus_atys
ENSIPUG00000001087	rnf17	79	36.431	ENSCLAG00000004127	RNF17	74	36.678	Chinchilla_lanigera
ENSIPUG00000001087	rnf17	90	35.931	ENSCSAG00000018019	RNF17	74	35.931	Chlorocebus_sabaeus
ENSIPUG00000001087	rnf17	58	44.030	ENSCHOG00000013310	RNF17	55	44.030	Choloepus_hoffmanni
ENSIPUG00000001087	rnf17	79	36.401	ENSCPBG00000020920	RNF17	77	36.401	Chrysemys_picta_bellii
ENSIPUG00000001087	rnf17	90	35.352	ENSCANG00000032927	RNF17	99	37.220	Colobus_angolensis_palliatus
ENSIPUG00000001087	rnf17	80	35.532	ENSCGRG00001022658	Rnf17	73	35.532	Cricetulus_griseus_chok1gshd
ENSIPUG00000001087	rnf17	80	35.532	ENSCGRG00000009924	Rnf17	73	35.532	Cricetulus_griseus_crigri
ENSIPUG00000001087	rnf17	93	43.766	ENSCSEG00000008626	rnf17	90	44.719	Cynoglossus_semilaevis
ENSIPUG00000001087	rnf17	73	47.814	ENSCVAG00000017008	rnf17	94	47.810	Cyprinodon_variegatus
ENSIPUG00000001087	rnf17	99	58.600	ENSDARG00000056387	rnf17	88	63.852	Danio_rerio
ENSIPUG00000001087	rnf17	99	32.021	ENSDNOG00000006115	RNF17	91	32.047	Dasypus_novemcinctus
ENSIPUG00000001087	rnf17	50	30.061	ENSEBUG00000016781	-	89	30.061	Eptatretus_burgeri
ENSIPUG00000001087	rnf17	80	35.750	ENSECAG00000017152	RNF17	72	35.750	Equus_caballus
ENSIPUG00000001087	rnf17	62	30.085	ENSEEUG00000000332	RNF17	65	30.085	Erinaceus_europaeus
ENSIPUG00000001087	rnf17	92	53.523	ENSELUG00000005626	rnf17	86	53.523	Esox_lucius
ENSIPUG00000001087	rnf17	79	35.164	ENSFCAG00000004914	RNF17	99	35.127	Felis_catus
ENSIPUG00000001087	rnf17	80	34.768	ENSFALG00000008766	RNF17	79	34.768	Ficedula_albicollis
ENSIPUG00000001087	rnf17	80	34.971	ENSFDAG00000017857	RNF17	73	35.299	Fukomys_damarensis
ENSIPUG00000001087	rnf17	92	46.769	ENSFHEG00000014822	rnf17	86	46.769	Fundulus_heteroclitus
ENSIPUG00000001087	rnf17	59	44.336	ENSGMOG00000015560	-	100	44.336	Gadus_morhua
ENSIPUG00000001087	rnf17	80	46.988	ENSGAFG00000004463	rnf17	90	47.382	Gambusia_affinis
ENSIPUG00000001087	rnf17	59	49.126	ENSGACG00000001340	-	100	49.126	Gasterosteus_aculeatus
ENSIPUG00000001087	rnf17	69	35.614	ENSGAGG00000016999	RNF17	70	35.614	Gopherus_agassizii
ENSIPUG00000001087	rnf17	90	35.352	ENSGGOG00000014491	RNF17	99	36.637	Gorilla_gorilla
ENSIPUG00000001087	rnf17	92	49.577	ENSHBUG00000003554	rnf17	86	49.577	Haplochromis_burtoni
ENSIPUG00000001087	rnf17	80	34.922	ENSHGLG00000007270	RNF17	73	35.251	Heterocephalus_glaber_female
ENSIPUG00000001087	rnf17	80	34.840	ENSHGLG00100017393	RNF17	74	35.168	Heterocephalus_glaber_male
ENSIPUG00000001087	rnf17	93	42.124	ENSHCOG00000017676	rnf17	97	42.197	Hippocampus_comes
ENSIPUG00000001087	rnf17	92	36.221	ENSJJAG00000016584	Rnf17	73	36.221	Jaculus_jaculus
ENSIPUG00000001087	rnf17	93	48.518	ENSKMAG00000013403	rnf17	86	48.603	Kryptolebias_marmoratus
ENSIPUG00000001087	rnf17	94	43.538	ENSLBEG00000014910	rnf17	97	43.538	Labrus_bergylta
ENSIPUG00000001087	rnf17	60	37.608	ENSLACG00000000323	RNF17	81	37.608	Latimeria_chalumnae
ENSIPUG00000001087	rnf17	99	38.089	ENSLOCG00000010768	rnf17	87	41.980	Lepisosteus_oculatus
ENSIPUG00000001087	rnf17	97	32.561	ENSMFAG00000032388	RNF17	99	36.937	Macaca_fascicularis
ENSIPUG00000001087	rnf17	97	32.972	ENSMMUG00000014610	RNF17	99	36.937	Macaca_mulatta
ENSIPUG00000001087	rnf17	97	32.972	ENSMNEG00000011234	RNF17	99	37.538	Macaca_nemestrina
ENSIPUG00000001087	rnf17	97	32.493	ENSMLEG00000030227	RNF17	78	35.280	Mandrillus_leucophaeus
ENSIPUG00000001087	rnf17	92	48.327	ENSMAMG00000020403	rnf17	99	48.325	Mastacembelus_armatus
ENSIPUG00000001087	rnf17	92	49.662	ENSMZEG00005019166	rnf17	86	49.662	Maylandia_zebra
ENSIPUG00000001087	rnf17	85	32.096	ENSMGAG00000015138	RNF17	96	32.809	Meleagris_gallopavo
ENSIPUG00000001087	rnf17	80	34.704	ENSMAUG00000004788	Rnf17	73	34.704	Mesocricetus_auratus
ENSIPUG00000001087	rnf17	79	35.720	ENSMICG00000010364	RNF17	99	35.725	Microcebus_murinus
ENSIPUG00000001087	rnf17	70	36.686	ENSMOCG00000011818	-	99	36.686	Microtus_ochrogaster
ENSIPUG00000001087	rnf17	87	48.634	ENSMMOG00000019514	rnf17	95	48.634	Mola_mola
ENSIPUG00000001087	rnf17	89	36.985	ENSMODG00000007827	RNF17	80	36.985	Monodelphis_domestica
ENSIPUG00000001087	rnf17	85	48.732	ENSMALG00000016943	rnf17	89	48.732	Monopterus_albus
ENSIPUG00000001087	rnf17	80	35.691	MGP_CAROLIEiJ_G0019337	Rnf17	73	35.691	Mus_caroli
ENSIPUG00000001087	rnf17	80	35.338	ENSMUSG00000000365	Rnf17	73	35.338	Mus_musculus
ENSIPUG00000001087	rnf17	80	35.314	MGP_PahariEiJ_G0030355	Rnf17	73	35.314	Mus_pahari
ENSIPUG00000001087	rnf17	80	35.502	MGP_SPRETEiJ_G0020228	Rnf17	73	35.502	Mus_spretus
ENSIPUG00000001087	rnf17	97	32.262	ENSMPUG00000013305	RNF17	91	32.530	Mustela_putorius_furo
ENSIPUG00000001087	rnf17	79	35.357	ENSMLUG00000003903	RNF17	74	35.685	Myotis_lucifugus
ENSIPUG00000001087	rnf17	80	35.173	ENSNGAG00000013553	Rnf17	73	35.338	Nannospalax_galili
ENSIPUG00000001087	rnf17	86	52.707	ENSNBRG00000012006	rnf17	93	52.707	Neolamprologus_brichardi
ENSIPUG00000001087	rnf17	97	32.769	ENSNLEG00000013780	RNF17	99	36.350	Nomascus_leucogenys
ENSIPUG00000001087	rnf17	67	48.101	ENSOPRG00000016743	-	56	48.101	Ochotona_princeps
ENSIPUG00000001087	rnf17	93	49.662	ENSONIG00000015746	rnf17	99	49.034	Oreochromis_niloticus
ENSIPUG00000001087	rnf17	79	35.815	ENSOCUG00000007384	RNF17	73	35.815	Oryctolagus_cuniculus
ENSIPUG00000001087	rnf17	85	46.252	ENSORLG00000012818	rnf17	90	46.252	Oryzias_latipes
ENSIPUG00000001087	rnf17	93	46.337	ENSORLG00020009879	-	89	46.337	Oryzias_latipes_hni
ENSIPUG00000001087	rnf17	93	46.252	ENSORLG00015013027	-	89	46.252	Oryzias_latipes_hsok
ENSIPUG00000001087	rnf17	85	45.722	ENSOMEG00000009891	rnf17	97	45.722	Oryzias_melastigma
ENSIPUG00000001087	rnf17	79	35.621	ENSOGAG00000014803	RNF17	74	35.708	Otolemur_garnettii
ENSIPUG00000001087	rnf17	85	34.880	ENSOARG00000014641	RNF17	77	35.422	Ovis_aries
ENSIPUG00000001087	rnf17	97	32.817	ENSPPAG00000028779	RNF17	99	37.104	Pan_paniscus
ENSIPUG00000001087	rnf17	79	35.439	ENSPPRG00000009230	RNF17	99	35.277	Panthera_pardus
ENSIPUG00000001087	rnf17	79	35.439	ENSPTIG00000001738	RNF17	99	35.277	Panthera_tigris_altaica
ENSIPUG00000001087	rnf17	97	32.817	ENSPTRG00000005713	RNF17	99	37.104	Pan_troglodytes
ENSIPUG00000001087	rnf17	80	35.755	ENSPANG00000007640	RNF17	99	36.937	Papio_anubis
ENSIPUG00000001087	rnf17	85	46.945	ENSPKIG00000001648	rnf17	90	49.055	Paramormyrops_kingsleyae
ENSIPUG00000001087	rnf17	80	36.409	ENSPSIG00000011245	RNF17	99	36.409	Pelodiscus_sinensis
ENSIPUG00000001087	rnf17	80	35.838	ENSPEMG00000008693	Rnf17	73	35.838	Peromyscus_maniculatus_bairdii
ENSIPUG00000001087	rnf17	73	35.722	ENSPCIG00000009190	-	93	35.480	Phascolarctos_cinereus
ENSIPUG00000001087	rnf17	92	50.000	ENSPFOG00000007124	rnf17	87	49.748	Poecilia_formosa
ENSIPUG00000001087	rnf17	92	50.387	ENSPLAG00000006198	rnf17	86	50.640	Poecilia_latipinna
ENSIPUG00000001087	rnf17	92	50.301	ENSPMEG00000022432	rnf17	90	49.860	Poecilia_mexicana
ENSIPUG00000001087	rnf17	79	48.376	ENSPREG00000001414	rnf17	82	48.522	Poecilia_reticulata
ENSIPUG00000001087	rnf17	90	35.106	ENSPPYG00000005215	RNF17	83	35.106	Pongo_abelii
ENSIPUG00000001087	rnf17	53	39.563	ENSPCAG00000002665	RNF17	52	39.563	Procavia_capensis
ENSIPUG00000001087	rnf17	70	33.333	ENSPCOG00000020211	RNF17	66	33.333	Propithecus_coquereli
ENSIPUG00000001087	rnf17	76	47.445	ENSPVAG00000013021	RNF17	72	47.445	Pteropus_vampyrus
ENSIPUG00000001087	rnf17	93	72.368	ENSPNAG00000027505	rnf17	99	73.192	Pygocentrus_nattereri
ENSIPUG00000001087	rnf17	80	35.832	ENSRNOG00000008059	Rnf17	73	35.832	Rattus_norvegicus
ENSIPUG00000001087	rnf17	96	34.047	ENSRBIG00000027010	RNF17	81	34.876	Rhinopithecus_bieti
ENSIPUG00000001087	rnf17	86	34.802	ENSRROG00000022801	RNF17	99	37.143	Rhinopithecus_roxellana
ENSIPUG00000001087	rnf17	90	35.621	ENSSBOG00000021661	RNF17	99	36.771	Saimiri_boliviensis_boliviensis
ENSIPUG00000001087	rnf17	79	37.046	ENSSHAG00000005609	RNF17	73	37.046	Sarcophilus_harrisii
ENSIPUG00000001087	rnf17	81	48.426	ENSSFOG00015023037	rnf17	91	48.340	Scleropages_formosus
ENSIPUG00000001087	rnf17	93	43.481	ENSSMAG00000007429	rnf17	97	43.921	Scophthalmus_maximus
ENSIPUG00000001087	rnf17	93	44.832	ENSSDUG00000013530	rnf17	90	49.816	Seriola_dumerili
ENSIPUG00000001087	rnf17	93	44.544	ENSSLDG00000019577	rnf17	90	50.276	Seriola_lalandi_dorsalis
ENSIPUG00000001087	rnf17	71	34.752	ENSSARG00000003016	RNF17	62	34.752	Sorex_araneus
ENSIPUG00000001087	rnf17	78	35.727	ENSSPUG00000008917	RNF17	80	35.727	Sphenodon_punctatus
ENSIPUG00000001087	rnf17	91	48.348	ENSSPAG00000001925	rnf17	89	50.949	Stegastes_partitus
ENSIPUG00000001087	rnf17	94	33.634	ENSSSCG00000009572	RNF17	86	33.634	Sus_scrofa
ENSIPUG00000001087	rnf17	57	35.072	ENSTGUG00000011267	-	100	35.072	Taeniopygia_guttata
ENSIPUG00000001087	rnf17	99	40.995	ENSTRUG00000015498	rnf17	96	40.805	Takifugu_rubripes
ENSIPUG00000001087	rnf17	79	44.701	ENSTNIG00000015681	rnf17	99	44.786	Tetraodon_nigroviridis
ENSIPUG00000001087	rnf17	69	41.250	ENSTBEG00000000282	RNF17	62	41.250	Tupaia_belangeri
ENSIPUG00000001087	rnf17	80	33.580	ENSTTRG00000012698	RNF17	74	33.661	Tursiops_truncatus
ENSIPUG00000001087	rnf17	83	47.887	ENSVPAG00000011388	RNF17	63	47.887	Vicugna_pacos
ENSIPUG00000001087	rnf17	79	34.679	ENSVVUG00000006226	RNF17	75	35.173	Vulpes_vulpes
ENSIPUG00000001087	rnf17	74	32.724	ENSXETG00000034020	RNF17	99	38.443	Xenopus_tropicalis
ENSIPUG00000001087	rnf17	87	49.953	ENSXCOG00000018295	rnf17	90	50.374	Xiphophorus_couchianus
ENSIPUG00000001087	rnf17	87	50.330	ENSXMAG00000014747	rnf17	98	45.560	Xiphophorus_maculatus