EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001127 (Gene tree)
Gene ID: 100528419
Gene Symbol: polr2i
Alias: rpb9
Full Name: RNA polymerase II subunit I
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5441 bases
Position: chr4:19282024-19287464
Accession: 100528419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001587	RNA_POL_M_15KD	PF02150.16	8.9e-17	1	1
ENSIPUP00000001603	RNA_POL_M_15KD	PF02150.16	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001663	-	1300	-	ENSIPUP00000001587	126 (aa)	-	-
ENSIPUT00000001679	-	1327	-	ENSIPUP00000001603	135 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000001127's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001127	polr2i	89	30.833	ENSIPUG00000011366	polr3k	99	30.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001127	polr2i	96	95.868	ENSG00000105258	POLR2I	97	95.868	Homo_sapiens
ENSIPUG00000001127	polr2i	100	97.619	ENSAPOG00000012409	polr2i	100	97.619	Acanthochromis_polyacanthus
ENSIPUG00000001127	polr2i	96	95.868	ENSAMEG00000000993	POLR2I	97	95.868	Ailuropoda_melanoleuca
ENSIPUG00000001127	polr2i	100	97.619	ENSAOCG00000024378	polr2i	100	97.619	Amphiprion_ocellaris
ENSIPUG00000001127	polr2i	100	97.619	ENSAPEG00000021748	polr2i	100	97.619	Amphiprion_percula
ENSIPUG00000001127	polr2i	100	96.032	ENSATEG00000000758	polr2i	100	96.032	Anabas_testudineus
ENSIPUG00000001127	polr2i	96	95.868	ENSANAG00000035318	POLR2I	97	95.868	Aotus_nancymaae
ENSIPUG00000001127	polr2i	100	97.619	ENSACLG00000001663	polr2i	100	97.619	Astatotilapia_calliptera
ENSIPUG00000001127	polr2i	100	97.619	ENSAMXG00000030198	polr2i	100	97.619	Astyanax_mexicanus
ENSIPUG00000001127	polr2i	96	95.868	ENSBTAG00000015002	POLR2I	97	95.868	Bos_taurus
ENSIPUG00000001127	polr2i	96	64.463	WBGene00022400	rpb-9	72	64.463	Caenorhabditis_elegans
ENSIPUG00000001127	polr2i	96	95.868	ENSCJAG00000009671	POLR2I	97	95.868	Callithrix_jacchus
ENSIPUG00000001127	polr2i	96	95.868	ENSCAFG00000006601	POLR2I	97	95.868	Canis_familiaris
ENSIPUG00000001127	polr2i	96	95.868	ENSCAFG00020018113	POLR2I	97	95.868	Canis_lupus_dingo
ENSIPUG00000001127	polr2i	96	95.868	ENSCHIG00000011961	POLR2I	97	95.868	Capra_hircus
ENSIPUG00000001127	polr2i	96	95.868	ENSTSYG00000028318	-	100	97.087	Carlito_syrichta
ENSIPUG00000001127	polr2i	82	68.932	ENSTSYG00000031752	-	95	68.932	Carlito_syrichta
ENSIPUG00000001127	polr2i	96	95.868	ENSCPOG00000012097	POLR2I	97	95.868	Cavia_porcellus
ENSIPUG00000001127	polr2i	96	95.868	ENSCCAG00000022138	-	97	95.868	Cebus_capucinus
ENSIPUG00000001127	polr2i	96	94.215	ENSCCAG00000032214	-	97	94.215	Cebus_capucinus
ENSIPUG00000001127	polr2i	96	95.868	ENSCATG00000017413	POLR2I	97	95.868	Cercocebus_atys
ENSIPUG00000001127	polr2i	96	95.868	ENSCLAG00000011800	POLR2I	97	95.868	Chinchilla_lanigera
ENSIPUG00000001127	polr2i	96	95.868	ENSCSAG00000004254	POLR2I	97	95.868	Chlorocebus_sabaeus
ENSIPUG00000001127	polr2i	96	95.868	ENSCPBG00000006726	POLR2I	97	95.868	Chrysemys_picta_bellii
ENSIPUG00000001127	polr2i	93	80.342	ENSCSAVG00000010630	-	93	80.342	Ciona_savignyi
ENSIPUG00000001127	polr2i	80	95.050	ENSCANG00000031951	POLR2I	96	95.050	Colobus_angolensis_palliatus
ENSIPUG00000001127	polr2i	100	95.238	ENSCSEG00000002213	polr2i	100	95.238	Cynoglossus_semilaevis
ENSIPUG00000001127	polr2i	100	94.444	ENSCVAG00000014797	polr2i	100	94.444	Cyprinodon_variegatus
ENSIPUG00000001127	polr2i	100	97.619	ENSDARG00000040443	polr2i	100	97.619	Danio_rerio
ENSIPUG00000001127	polr2i	96	95.868	ENSDNOG00000015842	POLR2I	97	95.868	Dasypus_novemcinctus
ENSIPUG00000001127	polr2i	96	95.868	ENSDORG00000001852	-	97	95.868	Dipodomys_ordii
ENSIPUG00000001127	polr2i	76	75.000	ENSDORG00000028026	-	99	75.000	Dipodomys_ordii
ENSIPUG00000001127	polr2i	90	76.106	ENSDORG00000029259	-	94	76.106	Dipodomys_ordii
ENSIPUG00000001127	polr2i	88	74.775	ENSDORG00000028728	-	95	74.775	Dipodomys_ordii
ENSIPUG00000001127	polr2i	93	78.632	FBgn0004855	RpII15	91	78.632	Drosophila_melanogaster
ENSIPUG00000001127	polr2i	96	95.868	ENSETEG00000012679	POLR2I	97	95.868	Echinops_telfairi
ENSIPUG00000001127	polr2i	100	88.976	ENSEBUG00000007333	polr2i	100	94.175	Eptatretus_burgeri
ENSIPUG00000001127	polr2i	96	95.868	ENSEASG00005002231	POLR2I	97	95.868	Equus_asinus_asinus
ENSIPUG00000001127	polr2i	96	95.868	ENSECAG00000013654	POLR2I	97	95.868	Equus_caballus
ENSIPUG00000001127	polr2i	96	95.868	ENSEEUG00000002113	POLR2I	97	95.868	Erinaceus_europaeus
ENSIPUG00000001127	polr2i	100	97.619	ENSELUG00000018012	polr2i	100	97.619	Esox_lucius
ENSIPUG00000001127	polr2i	96	95.868	ENSFCAG00000026052	POLR2I	97	95.868	Felis_catus
ENSIPUG00000001127	polr2i	51	93.750	ENSFALG00000006198	POLR2I	100	93.750	Ficedula_albicollis
ENSIPUG00000001127	polr2i	96	95.868	ENSFDAG00000011350	POLR2I	97	95.868	Fukomys_damarensis
ENSIPUG00000001127	polr2i	100	95.238	ENSFHEG00000015659	polr2i	100	95.238	Fundulus_heteroclitus
ENSIPUG00000001127	polr2i	100	96.825	ENSGMOG00000013806	polr2i	100	96.825	Gadus_morhua
ENSIPUG00000001127	polr2i	96	93.388	ENSGALG00000038595	POLR2I	93	93.388	Gallus_gallus
ENSIPUG00000001127	polr2i	100	97.619	ENSGAFG00000001037	polr2i	100	97.619	Gambusia_affinis
ENSIPUG00000001127	polr2i	100	97.619	ENSGACG00000006679	polr2i	100	97.619	Gasterosteus_aculeatus
ENSIPUG00000001127	polr2i	96	95.868	ENSGAGG00000015806	POLR2I	97	95.868	Gopherus_agassizii
ENSIPUG00000001127	polr2i	96	95.868	ENSGGOG00000015426	POLR2I	97	95.868	Gorilla_gorilla
ENSIPUG00000001127	polr2i	100	96.825	ENSHBUG00000004140	polr2i	100	96.825	Haplochromis_burtoni
ENSIPUG00000001127	polr2i	82	97.087	ENSHGLG00000007388	POLR2I	100	97.087	Heterocephalus_glaber_female
ENSIPUG00000001127	polr2i	82	97.087	ENSHGLG00100014515	POLR2I	100	97.087	Heterocephalus_glaber_male
ENSIPUG00000001127	polr2i	100	97.619	ENSHCOG00000010967	polr2i	100	97.619	Hippocampus_comes
ENSIPUG00000001127	polr2i	96	95.868	ENSSTOG00000009411	POLR2I	97	95.868	Ictidomys_tridecemlineatus
ENSIPUG00000001127	polr2i	96	95.868	ENSJJAG00000014400	Polr2i	97	95.868	Jaculus_jaculus
ENSIPUG00000001127	polr2i	100	96.825	ENSKMAG00000001567	polr2i	100	96.825	Kryptolebias_marmoratus
ENSIPUG00000001127	polr2i	71	96.629	ENSLBEG00000028538	-	100	96.629	Labrus_bergylta
ENSIPUG00000001127	polr2i	100	97.619	ENSLBEG00000001220	polr2i	100	97.619	Labrus_bergylta
ENSIPUG00000001127	polr2i	93	98.291	ENSLACG00000009590	POLR2I	94	98.291	Latimeria_chalumnae
ENSIPUG00000001127	polr2i	100	98.413	ENSLOCG00000014818	polr2i	100	98.413	Lepisosteus_oculatus
ENSIPUG00000001127	polr2i	96	95.868	ENSLAFG00000015527	POLR2I	97	95.868	Loxodonta_africana
ENSIPUG00000001127	polr2i	96	95.868	ENSMFAG00000039443	POLR2I	97	95.868	Macaca_fascicularis
ENSIPUG00000001127	polr2i	82	97.087	ENSMMUG00000000522	POLR2I	100	97.087	Macaca_mulatta
ENSIPUG00000001127	polr2i	96	96.694	ENSMNEG00000029421	POLR2I	97	96.694	Macaca_nemestrina
ENSIPUG00000001127	polr2i	96	95.868	ENSMLEG00000039720	POLR2I	97	95.868	Mandrillus_leucophaeus
ENSIPUG00000001127	polr2i	100	96.825	ENSMAMG00000013970	polr2i	100	96.825	Mastacembelus_armatus
ENSIPUG00000001127	polr2i	100	97.619	ENSMZEG00005013082	polr2i	100	97.619	Maylandia_zebra
ENSIPUG00000001127	polr2i	96	93.388	ENSMGAG00000008576	POLR2I	97	93.388	Meleagris_gallopavo
ENSIPUG00000001127	polr2i	96	95.868	ENSMAUG00000001001	Polr2i	97	95.868	Mesocricetus_auratus
ENSIPUG00000001127	polr2i	96	95.868	ENSMICG00000010241	POLR2I	97	95.868	Microcebus_murinus
ENSIPUG00000001127	polr2i	96	95.868	ENSMOCG00000011984	Polr2i	97	95.868	Microtus_ochrogaster
ENSIPUG00000001127	polr2i	82	100.000	ENSMMOG00000004945	polr2i	100	100.000	Mola_mola
ENSIPUG00000001127	polr2i	96	95.868	ENSMODG00000014172	POLR2I	97	95.868	Monodelphis_domestica
ENSIPUG00000001127	polr2i	96	95.868	MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	Mus_caroli
ENSIPUG00000001127	polr2i	96	95.868	ENSMUSG00000019738	Polr2i	100	97.087	Mus_musculus
ENSIPUG00000001127	polr2i	96	95.868	MGP_PahariEiJ_G0012741	Polr2i	100	97.087	Mus_pahari
ENSIPUG00000001127	polr2i	96	95.868	MGP_SPRETEiJ_G0030603	Polr2i	100	97.087	Mus_spretus
ENSIPUG00000001127	polr2i	96	95.868	ENSMPUG00000005702	POLR2I	97	95.868	Mustela_putorius_furo
ENSIPUG00000001127	polr2i	96	95.868	ENSMLUG00000012317	POLR2I	97	95.868	Myotis_lucifugus
ENSIPUG00000001127	polr2i	96	95.868	ENSNGAG00000014966	Polr2i	97	95.868	Nannospalax_galili
ENSIPUG00000001127	polr2i	100	97.619	ENSNBRG00000000723	polr2i	100	97.619	Neolamprologus_brichardi
ENSIPUG00000001127	polr2i	96	95.868	ENSNLEG00000011691	POLR2I	97	95.868	Nomascus_leucogenys
ENSIPUG00000001127	polr2i	96	95.868	ENSOPRG00000001789	-	97	95.868	Ochotona_princeps
ENSIPUG00000001127	polr2i	96	95.041	ENSOPRG00000008681	-	97	95.041	Ochotona_princeps
ENSIPUG00000001127	polr2i	96	95.868	ENSODEG00000015015	-	97	95.868	Octodon_degus
ENSIPUG00000001127	polr2i	92	80.172	ENSODEG00000017901	-	88	80.172	Octodon_degus
ENSIPUG00000001127	polr2i	100	97.619	ENSONIG00000005397	polr2i	100	97.619	Oreochromis_niloticus
ENSIPUG00000001127	polr2i	96	95.868	ENSOCUG00000013044	POLR2I	97	95.868	Oryctolagus_cuniculus
ENSIPUG00000001127	polr2i	96	96.694	ENSOCUG00000024998	-	97	96.694	Oryctolagus_cuniculus
ENSIPUG00000001127	polr2i	100	96.825	ENSORLG00000013308	polr2i	100	96.825	Oryzias_latipes
ENSIPUG00000001127	polr2i	100	97.619	ENSORLG00020011281	polr2i	100	97.619	Oryzias_latipes_hni
ENSIPUG00000001127	polr2i	100	97.619	ENSORLG00015019529	polr2i	100	97.619	Oryzias_latipes_hsok
ENSIPUG00000001127	polr2i	100	97.619	ENSOMEG00000012586	polr2i	100	97.619	Oryzias_melastigma
ENSIPUG00000001127	polr2i	96	95.868	ENSOGAG00000024254	POLR2I	97	95.868	Otolemur_garnettii
ENSIPUG00000001127	polr2i	96	95.868	ENSOARG00000005266	POLR2I	97	95.868	Ovis_aries
ENSIPUG00000001127	polr2i	96	95.868	ENSPPAG00000033446	POLR2I	97	95.868	Pan_paniscus
ENSIPUG00000001127	polr2i	96	95.868	ENSPPRG00000007194	POLR2I	97	95.868	Panthera_pardus
ENSIPUG00000001127	polr2i	96	95.868	ENSPTIG00000018661	POLR2I	97	95.868	Panthera_tigris_altaica
ENSIPUG00000001127	polr2i	96	95.868	ENSPTRG00000010885	POLR2I	97	95.868	Pan_troglodytes
ENSIPUG00000001127	polr2i	96	95.868	ENSPANG00000004508	POLR2I	97	95.868	Papio_anubis
ENSIPUG00000001127	polr2i	100	97.619	ENSPKIG00000001086	polr2i	100	97.619	Paramormyrops_kingsleyae
ENSIPUG00000001127	polr2i	82	97.087	ENSPSIG00000011560	POLR2I	100	97.087	Pelodiscus_sinensis
ENSIPUG00000001127	polr2i	100	92.308	ENSPMGG00000016154	polr2i	100	92.308	Periophthalmus_magnuspinnatus
ENSIPUG00000001127	polr2i	96	95.868	ENSPEMG00000014212	Polr2i	97	95.868	Peromyscus_maniculatus_bairdii
ENSIPUG00000001127	polr2i	96	95.868	ENSPCIG00000015436	-	97	95.868	Phascolarctos_cinereus
ENSIPUG00000001127	polr2i	100	97.619	ENSPFOG00000016816	polr2i	100	97.619	Poecilia_formosa
ENSIPUG00000001127	polr2i	100	97.619	ENSPLAG00000010639	polr2i	100	97.619	Poecilia_latipinna
ENSIPUG00000001127	polr2i	100	97.619	ENSPMEG00000005956	polr2i	100	97.619	Poecilia_mexicana
ENSIPUG00000001127	polr2i	100	97.619	ENSPREG00000004227	polr2i	100	97.619	Poecilia_reticulata
ENSIPUG00000001127	polr2i	96	95.868	ENSPPYG00000009897	POLR2I	97	95.868	Pongo_abelii
ENSIPUG00000001127	polr2i	96	95.868	ENSPCAG00000003494	POLR2I	97	95.868	Procavia_capensis
ENSIPUG00000001127	polr2i	96	95.868	ENSPCOG00000018643	POLR2I	97	95.868	Propithecus_coquereli
ENSIPUG00000001127	polr2i	96	95.868	ENSPVAG00000012883	POLR2I	97	95.868	Pteropus_vampyrus
ENSIPUG00000001127	polr2i	100	97.619	ENSPNYG00000011908	polr2i	100	97.619	Pundamilia_nyererei
ENSIPUG00000001127	polr2i	100	97.619	ENSPNAG00000005859	polr2i	100	97.619	Pygocentrus_nattereri
ENSIPUG00000001127	polr2i	96	95.868	ENSRNOG00000020799	LOC103690054	97	95.868	Rattus_norvegicus
ENSIPUG00000001127	polr2i	96	95.868	ENSRNOG00000050560	Polr2i	97	95.868	Rattus_norvegicus
ENSIPUG00000001127	polr2i	96	95.868	ENSRBIG00000037225	POLR2I	97	95.868	Rhinopithecus_bieti
ENSIPUG00000001127	polr2i	96	95.868	ENSRROG00000042843	POLR2I	97	95.868	Rhinopithecus_roxellana
ENSIPUG00000001127	polr2i	88	45.045	YGL070C	RPB9	89	45.045	Saccharomyces_cerevisiae
ENSIPUG00000001127	polr2i	94	77.119	ENSSBOG00000022998	-	70	77.119	Saimiri_boliviensis_boliviensis
ENSIPUG00000001127	polr2i	96	95.868	ENSSBOG00000030799	-	97	95.868	Saimiri_boliviensis_boliviensis
ENSIPUG00000001127	polr2i	100	97.619	ENSSFOG00015022523	polr2i	100	97.619	Scleropages_formosus
ENSIPUG00000001127	polr2i	100	96.825	ENSSMAG00000003335	polr2i	100	96.825	Scophthalmus_maximus
ENSIPUG00000001127	polr2i	100	96.032	ENSSDUG00000005483	polr2i	100	96.032	Seriola_dumerili
ENSIPUG00000001127	polr2i	100	96.032	ENSSLDG00000009341	polr2i	100	96.032	Seriola_lalandi_dorsalis
ENSIPUG00000001127	polr2i	96	95.868	ENSSARG00000009331	POLR2I	97	95.868	Sorex_araneus
ENSIPUG00000001127	polr2i	96	95.868	ENSSPUG00000012658	POLR2I	97	95.868	Sphenodon_punctatus
ENSIPUG00000001127	polr2i	100	97.619	ENSSPAG00000015734	polr2i	100	97.619	Stegastes_partitus
ENSIPUG00000001127	polr2i	96	95.868	ENSSSCG00000039196	POLR2I	97	95.868	Sus_scrofa
ENSIPUG00000001127	polr2i	100	97.619	ENSTRUG00000022235	polr2i	100	97.619	Takifugu_rubripes
ENSIPUG00000001127	polr2i	100	97.619	ENSTNIG00000011737	polr2i	100	97.619	Tetraodon_nigroviridis
ENSIPUG00000001127	polr2i	96	95.868	ENSTTRG00000003919	POLR2I	97	95.868	Tursiops_truncatus
ENSIPUG00000001127	polr2i	96	95.868	ENSUAMG00000020575	POLR2I	97	95.868	Ursus_americanus
ENSIPUG00000001127	polr2i	96	95.868	ENSUMAG00000020809	POLR2I	97	95.868	Ursus_maritimus
ENSIPUG00000001127	polr2i	96	95.868	ENSVVUG00000013588	POLR2I	97	95.868	Vulpes_vulpes
ENSIPUG00000001127	polr2i	100	97.619	ENSXCOG00000001119	polr2i	100	97.619	Xiphophorus_couchianus
ENSIPUG00000001127	polr2i	100	97.619	ENSXMAG00000021278	polr2i	100	97.619	Xiphophorus_maculatus