EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001158 (Gene tree)
Gene ID: 108261754
Gene Symbol: c1h8orf88
Alias: -
Full Name: chromosome 1 C8orf88 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11581 bases
Position: chr1:12463097-12474677
Accession: 108261754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001614	eIF_4EBP	PF05456.11	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001690	-	1183	XM_017462570	ENSIPUP00000001614	136 (aa)	XP_017318059	A0A2D0QIN1

Gene Model

Click here to download ENSIPUG00000001158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001158	c1h8orf88	85	55.814	ENSAMXG00000038383	-	95	55.814	Astyanax_mexicanus
ENSIPUG00000001158	c1h8orf88	79	51.351	ENSPKIG00000018645	-	95	51.351	Paramormyrops_kingsleyae
ENSIPUG00000001158	c1h8orf88	85	57.391	ENSPNAG00000000699	-	94	57.391	Pygocentrus_nattereri
ENSIPUG00000001158	c1h8orf88	82	50.435	ENSSFOG00015001615	cunh8orf88	90	50.435	Scleropages_formosus