EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001167 (Gene tree)
Gene ID: 108267809
Gene Symbol: RBM12B
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1965 bases
Position: chr1:12481534-12483498
Accession: 108267809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001630	RRM_1	PF00076.22	2.4e-28	1	2
ENSIPUP00000001630	RRM_1	PF00076.22	2.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001708	-	1965	XM_017472240	ENSIPUP00000001630	654 (aa)	XP_017327729	W5UF47

Gene Model

Click here to download ENSIPUG00000001167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001167	RBM12B	71	31.569	ENSIPUG00000019731	zgc:153215	98	31.238
ENSIPUG00000001167	RBM12B	83	65.957	ENSIPUG00000014491	rbm12	55	65.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001167	RBM12B	87	46.067	ENSG00000183808	RBM12B	99	74.074	Homo_sapiens
ENSIPUG00000001167	RBM12B	97	45.537	ENSAPOG00000013963	rbm12b	100	45.537	Acanthochromis_polyacanthus
ENSIPUG00000001167	RBM12B	87	48.315	ENSAMEG00000007134	RBM12B	70	48.315	Ailuropoda_melanoleuca
ENSIPUG00000001167	RBM12B	72	47.771	ENSACIG00000014943	rbm12b	97	51.333	Amphilophus_citrinellus
ENSIPUG00000001167	RBM12B	97	45.593	ENSAOCG00000024270	rbm12b	100	45.593	Amphiprion_ocellaris
ENSIPUG00000001167	RBM12B	95	49.804	ENSAPEG00000022079	rbm12b	99	48.515	Amphiprion_percula
ENSIPUG00000001167	RBM12B	71	50.000	ENSATEG00000001886	zgc:153215	83	39.516	Anabas_testudineus
ENSIPUG00000001167	RBM12B	99	46.628	ENSATEG00000004578	rbm12b	99	46.131	Anabas_testudineus
ENSIPUG00000001167	RBM12B	97	36.662	ENSAPLG00000002020	RBM12B	100	37.324	Anas_platyrhynchos
ENSIPUG00000001167	RBM12B	85	46.753	ENSACAG00000003463	RBM12B	58	46.753	Anolis_carolinensis
ENSIPUG00000001167	RBM12B	87	46.067	ENSANAG00000034015	RBM12B	70	46.067	Aotus_nancymaae
ENSIPUG00000001167	RBM12B	99	44.690	ENSACLG00000005575	rbm12b	99	44.690	Astatotilapia_calliptera
ENSIPUG00000001167	RBM12B	97	42.320	ENSACLG00000005578	rbm12b	100	42.320	Astatotilapia_calliptera
ENSIPUG00000001167	RBM12B	97	64.984	ENSAMXG00000041973	rbm12b	100	65.142	Astyanax_mexicanus
ENSIPUG00000001167	RBM12B	97	47.191	ENSBTAG00000013408	RBM12B	81	47.191	Bos_taurus
ENSIPUG00000001167	RBM12B	87	46.067	ENSCAFG00000009109	RBM12B	59	46.067	Canis_familiaris
ENSIPUG00000001167	RBM12B	87	46.067	ENSCAFG00020012203	RBM12B	67	46.067	Canis_lupus_dingo
ENSIPUG00000001167	RBM12B	74	42.412	ENSCHIG00000006790	RBM12B	79	39.523	Capra_hircus
ENSIPUG00000001167	RBM12B	87	47.191	ENSTSYG00000012515	RBM12B	60	47.191	Carlito_syrichta
ENSIPUG00000001167	RBM12B	85	48.315	ENSCAPG00000003543	RBM12B	60	48.315	Cavia_aperea
ENSIPUG00000001167	RBM12B	85	48.315	ENSCPOG00000007815	RBM12B	60	48.315	Cavia_porcellus
ENSIPUG00000001167	RBM12B	87	46.067	ENSCATG00000030769	RBM12B	68	46.067	Cercocebus_atys
ENSIPUG00000001167	RBM12B	87	48.315	ENSCLAG00000017617	RBM12B	62	48.315	Chinchilla_lanigera
ENSIPUG00000001167	RBM12B	87	46.067	ENSCSAG00000018559	RBM12B	59	46.067	Chlorocebus_sabaeus
ENSIPUG00000001167	RBM12B	83	48.000	ENSCHOG00000008934	RBM12B	59	48.000	Choloepus_hoffmanni
ENSIPUG00000001167	RBM12B	97	38.088	ENSCPBG00000003061	RBM12B	100	38.088	Chrysemys_picta_bellii
ENSIPUG00000001167	RBM12B	85	46.067	ENSCANG00000030379	RBM12B	67	46.067	Colobus_angolensis_palliatus
ENSIPUG00000001167	RBM12B	85	49.438	ENSCGRG00001008710	-	67	49.438	Cricetulus_griseus_chok1gshd
ENSIPUG00000001167	RBM12B	98	44.635	ENSCSEG00000004610	rbm12b	99	44.540	Cynoglossus_semilaevis
ENSIPUG00000001167	RBM12B	64	41.791	ENSCVAG00000009259	-	99	41.791	Cyprinodon_variegatus
ENSIPUG00000001167	RBM12B	97	43.353	ENSCVAG00000011047	rbm12b	100	43.807	Cyprinodon_variegatus
ENSIPUG00000001167	RBM12B	97	54.638	ENSDARG00000079717	rbm12b	100	55.072	Danio_rerio
ENSIPUG00000001167	RBM12B	87	47.191	ENSDNOG00000041608	RBM12B	59	47.191	Dasypus_novemcinctus
ENSIPUG00000001167	RBM12B	97	46.067	ENSDORG00000024034	-	72	46.067	Dipodomys_ordii
ENSIPUG00000001167	RBM12B	74	41.551	ENSETEG00000013005	-	68	41.732	Echinops_telfairi
ENSIPUG00000001167	RBM12B	70	30.769	ENSEBUG00000010930	-	84	30.769	Eptatretus_burgeri
ENSIPUG00000001167	RBM12B	79	34.831	ENSEBUG00000004292	-	88	34.831	Eptatretus_burgeri
ENSIPUG00000001167	RBM12B	87	48.315	ENSEASG00005016297	RBM12B	67	48.315	Equus_asinus_asinus
ENSIPUG00000001167	RBM12B	87	48.315	ENSECAG00000017870	RBM12B	60	48.315	Equus_caballus
ENSIPUG00000001167	RBM12B	71	30.634	ENSELUG00000009039	zgc:153215	97	30.986	Esox_lucius
ENSIPUG00000001167	RBM12B	87	46.067	ENSFCAG00000029274	RBM12B	68	46.067	Felis_catus
ENSIPUG00000001167	RBM12B	97	36.261	ENSFALG00000014893	RBM12B	100	36.530	Ficedula_albicollis
ENSIPUG00000001167	RBM12B	87	48.315	ENSFDAG00000005576	RBM12B	60	48.315	Fukomys_damarensis
ENSIPUG00000001167	RBM12B	97	44.275	ENSFHEG00000016425	rbm12b	100	44.665	Fundulus_heteroclitus
ENSIPUG00000001167	RBM12B	96	49.923	ENSGMOG00000013467	rbm12b	100	49.923	Gadus_morhua
ENSIPUG00000001167	RBM12B	97	37.011	ENSGALG00000035129	RBM12B	100	37.011	Gallus_gallus
ENSIPUG00000001167	RBM12B	97	45.770	ENSGAFG00000007224	rbm12b	100	45.921	Gambusia_affinis
ENSIPUG00000001167	RBM12B	97	44.378	ENSGACG00000008682	rbm12b	99	43.910	Gasterosteus_aculeatus
ENSIPUG00000001167	RBM12B	97	37.535	ENSGAGG00000009774	RBM12B	100	37.535	Gopherus_agassizii
ENSIPUG00000001167	RBM12B	87	46.067	ENSGGOG00000011909	RBM12B	67	46.067	Gorilla_gorilla
ENSIPUG00000001167	RBM12B	97	44.248	ENSHBUG00000016227	rbm12b	100	44.248	Haplochromis_burtoni
ENSIPUG00000001167	RBM12B	85	48.315	ENSHGLG00000009063	RBM12B	60	48.315	Heterocephalus_glaber_female
ENSIPUG00000001167	RBM12B	85	48.315	ENSHGLG00100021324	RBM12B	60	48.315	Heterocephalus_glaber_male
ENSIPUG00000001167	RBM12B	97	43.143	ENSHCOG00000014952	rbm12b	100	43.143	Hippocampus_comes
ENSIPUG00000001167	RBM12B	87	49.438	ENSSTOG00000027445	RBM12B	70	49.438	Ictidomys_tridecemlineatus
ENSIPUG00000001167	RBM12B	97	44.944	ENSJJAG00000004165	-	75	44.944	Jaculus_jaculus
ENSIPUG00000001167	RBM12B	97	42.105	ENSKMAG00000013715	rbm12b	100	42.663	Kryptolebias_marmoratus
ENSIPUG00000001167	RBM12B	98	41.431	ENSKMAG00000013704	rbm12b	97	41.979	Kryptolebias_marmoratus
ENSIPUG00000001167	RBM12B	96	40.142	ENSLACG00000007177	RBM12B	100	41.185	Latimeria_chalumnae
ENSIPUG00000001167	RBM12B	97	50.742	ENSLOCG00000018344	rbm12b	100	50.742	Lepisosteus_oculatus
ENSIPUG00000001167	RBM12B	87	49.438	ENSLAFG00000029949	RBM12B	70	49.438	Loxodonta_africana
ENSIPUG00000001167	RBM12B	87	46.067	ENSMFAG00000045430	RBM12B	68	46.067	Macaca_fascicularis
ENSIPUG00000001167	RBM12B	87	46.067	ENSMMUG00000005558	RBM12B	67	46.067	Macaca_mulatta
ENSIPUG00000001167	RBM12B	87	46.067	ENSMNEG00000041292	RBM12B	68	46.067	Macaca_nemestrina
ENSIPUG00000001167	RBM12B	87	46.067	ENSMLEG00000037288	RBM12B	67	46.067	Mandrillus_leucophaeus
ENSIPUG00000001167	RBM12B	97	46.889	ENSMAMG00000011998	rbm12b	100	47.626	Mastacembelus_armatus
ENSIPUG00000001167	RBM12B	99	43.155	ENSMZEG00005014845	rbm12b	99	43.155	Maylandia_zebra
ENSIPUG00000001167	RBM12B	97	45.053	ENSMZEG00005015005	rbm12b	100	45.053	Maylandia_zebra
ENSIPUG00000001167	RBM12B	72	38.996	ENSMGAG00000011985	RBM12B	98	38.996	Meleagris_gallopavo
ENSIPUG00000001167	RBM12B	90	40.039	ENSMAUG00000021752	-	76	40.234	Mesocricetus_auratus
ENSIPUG00000001167	RBM12B	87	47.191	ENSMICG00000036969	RBM12B	70	47.191	Microcebus_murinus
ENSIPUG00000001167	RBM12B	97	50.562	ENSMOCG00000005603	-	80	50.562	Microtus_ochrogaster
ENSIPUG00000001167	RBM12B	99	41.829	ENSMMOG00000002404	rbm12b	98	42.302	Mola_mola
ENSIPUG00000001167	RBM12B	87	44.944	ENSMODG00000007436	RBM12B	79	44.944	Monodelphis_domestica
ENSIPUG00000001167	RBM12B	97	45.889	ENSMALG00000012059	rbm12b	100	45.889	Monopterus_albus
ENSIPUG00000001167	RBM12B	72	33.537	ENSMALG00000001222	zgc:153215	99	33.537	Monopterus_albus
ENSIPUG00000001167	RBM12B	93	50.667	ENSMUSG00000052137	Rbm12b2	75	50.667	Mus_musculus
ENSIPUG00000001167	RBM12B	97	39.683	ENSMUSG00000046667	Rbm12b1	83	39.683	Mus_musculus
ENSIPUG00000001167	RBM12B	94	47.191	MGP_SPRETEiJ_G0026765	-	70	47.191	Mus_spretus
ENSIPUG00000001167	RBM12B	94	47.191	MGP_SPRETEiJ_G0026766	-	78	47.191	Mus_spretus
ENSIPUG00000001167	RBM12B	87	47.191	ENSMPUG00000018637	RBM12B	59	47.191	Mustela_putorius_furo
ENSIPUG00000001167	RBM12B	85	44.944	ENSMLUG00000002359	RBM12B	61	44.944	Myotis_lucifugus
ENSIPUG00000001167	RBM12B	92	39.844	ENSNGAG00000002801	-	69	39.844	Nannospalax_galili
ENSIPUG00000001167	RBM12B	97	45.372	ENSNBRG00000015057	rbm12b	100	45.372	Neolamprologus_brichardi
ENSIPUG00000001167	RBM12B	87	46.067	ENSNLEG00000032050	RBM12B	67	46.067	Nomascus_leucogenys
ENSIPUG00000001167	RBM12B	97	48.315	ENSODEG00000019204	RBM12B	72	48.315	Octodon_degus
ENSIPUG00000001167	RBM12B	97	46.386	ENSONIG00000020612	rbm12b	100	46.131	Oreochromis_niloticus
ENSIPUG00000001167	RBM12B	97	37.625	ENSOANG00000015735	-	97	38.340	Ornithorhynchus_anatinus
ENSIPUG00000001167	RBM12B	85	47.191	ENSOCUG00000010353	RBM12B	66	47.191	Oryctolagus_cuniculus
ENSIPUG00000001167	RBM12B	99	42.563	ENSORLG00000008228	rbm12b	99	42.563	Oryzias_latipes
ENSIPUG00000001167	RBM12B	99	42.415	ENSORLG00020013619	rbm12b	99	42.415	Oryzias_latipes_hni
ENSIPUG00000001167	RBM12B	99	42.268	ENSORLG00015019999	rbm12b	99	42.268	Oryzias_latipes_hsok
ENSIPUG00000001167	RBM12B	72	30.149	ENSOMEG00000004220	zgc:153215	96	30.149	Oryzias_melastigma
ENSIPUG00000001167	RBM12B	99	43.504	ENSOMEG00000022523	rbm12b	99	43.504	Oryzias_melastigma
ENSIPUG00000001167	RBM12B	87	47.191	ENSOGAG00000002979	RBM12B	60	47.191	Otolemur_garnettii
ENSIPUG00000001167	RBM12B	87	46.067	ENSPTIG00000020071	RBM12B	68	46.067	Panthera_tigris_altaica
ENSIPUG00000001167	RBM12B	87	46.067	ENSPTRG00000020420	RBM12B	67	46.067	Pan_troglodytes
ENSIPUG00000001167	RBM12B	87	46.067	ENSPANG00000035535	RBM12B	67	46.067	Papio_anubis
ENSIPUG00000001167	RBM12B	97	51.714	ENSPKIG00000018719	rbm12b	99	51.351	Paramormyrops_kingsleyae
ENSIPUG00000001167	RBM12B	71	32.186	ENSPKIG00000014851	zgc:153215	98	32.186	Paramormyrops_kingsleyae
ENSIPUG00000001167	RBM12B	97	38.218	ENSPSIG00000001348	RBM12B	100	38.218	Pelodiscus_sinensis
ENSIPUG00000001167	RBM12B	66	44.776	ENSPMGG00000012348	-	97	44.776	Periophthalmus_magnuspinnatus
ENSIPUG00000001167	RBM12B	95	40.039	ENSPEMG00000008279	-	78	40.039	Peromyscus_maniculatus_bairdii
ENSIPUG00000001167	RBM12B	86	46.835	ENSPCIG00000008556	RBM12B	80	46.835	Phascolarctos_cinereus
ENSIPUG00000001167	RBM12B	61	53.488	ENSPFOG00000017451	zgc:153215	71	42.636	Poecilia_formosa
ENSIPUG00000001167	RBM12B	100	46.847	ENSPFOG00000020937	rbm12b	100	46.547	Poecilia_formosa
ENSIPUG00000001167	RBM12B	97	46.423	ENSPLAG00000018782	rbm12b	100	46.119	Poecilia_latipinna
ENSIPUG00000001167	RBM12B	97	46.423	ENSPMEG00000011418	rbm12b	100	46.119	Poecilia_mexicana
ENSIPUG00000001167	RBM12B	97	45.967	ENSPREG00000020770	rbm12b	100	45.662	Poecilia_reticulata
ENSIPUG00000001167	RBM12B	71	30.178	ENSPREG00000018608	zgc:153215	99	30.178	Poecilia_reticulata
ENSIPUG00000001167	RBM12B	87	46.067	ENSPPYG00000018745	RBM12B	59	46.067	Pongo_abelii
ENSIPUG00000001167	RBM12B	94	48.315	ENSPCOG00000023546	RBM12B	71	48.315	Propithecus_coquereli
ENSIPUG00000001167	RBM12B	87	47.191	ENSPVAG00000011803	RBM12B	63	47.191	Pteropus_vampyrus
ENSIPUG00000001167	RBM12B	97	45.060	ENSPNYG00000016696	rbm12b	100	45.060	Pundamilia_nyererei
ENSIPUG00000001167	RBM12B	100	65.778	ENSPNAG00000008126	rbm12b	100	66.222	Pygocentrus_nattereri
ENSIPUG00000001167	RBM12B	71	30.072	ENSPNAG00000025628	zgc:153215	99	30.072	Pygocentrus_nattereri
ENSIPUG00000001167	RBM12B	84	37.374	ENSRNOG00000055292	LOC679087	76	37.374	Rattus_norvegicus
ENSIPUG00000001167	RBM12B	95	50.667	ENSRNOG00000016330	Rbm12b	76	50.667	Rattus_norvegicus
ENSIPUG00000001167	RBM12B	87	46.067	ENSRBIG00000035046	RBM12B	67	46.067	Rhinopithecus_bieti
ENSIPUG00000001167	RBM12B	87	46.067	ENSRROG00000023660	RBM12B	70	46.067	Rhinopithecus_roxellana
ENSIPUG00000001167	RBM12B	85	48.101	ENSSBOG00000027592	RBM12B	64	48.101	Saimiri_boliviensis_boliviensis
ENSIPUG00000001167	RBM12B	86	46.835	ENSSHAG00000015335	RBM12B	80	46.835	Sarcophilus_harrisii
ENSIPUG00000001167	RBM12B	97	52.012	ENSSFOG00015001584	rbm12b	100	51.488	Scleropages_formosus
ENSIPUG00000001167	RBM12B	71	33.932	ENSSFOG00015009427	zgc:153215	99	33.733	Scleropages_formosus
ENSIPUG00000001167	RBM12B	97	47.023	ENSSMAG00000019708	rbm12b	100	47.023	Scophthalmus_maximus
ENSIPUG00000001167	RBM12B	71	30.040	ENSSMAG00000019013	zgc:153215	96	30.040	Scophthalmus_maximus
ENSIPUG00000001167	RBM12B	97	47.478	ENSSDUG00000006856	rbm12b	100	47.478	Seriola_dumerili
ENSIPUG00000001167	RBM12B	97	47.852	ENSSLDG00000016156	rbm12b	100	47.852	Seriola_lalandi_dorsalis
ENSIPUG00000001167	RBM12B	71	51.250	ENSSLDG00000013581	zgc:153215	77	47.253	Seriola_lalandi_dorsalis
ENSIPUG00000001167	RBM12B	74	39.530	ENSSARG00000011845	-	68	39.335	Sorex_araneus
ENSIPUG00000001167	RBM12B	72	39.845	ENSSPUG00000016954	RBM12B	91	40.426	Sphenodon_punctatus
ENSIPUG00000001167	RBM12B	97	46.224	ENSSPAG00000006774	rbm12b	100	46.224	Stegastes_partitus
ENSIPUG00000001167	RBM12B	71	31.130	ENSSPAG00000023584	zgc:153215	98	31.130	Stegastes_partitus
ENSIPUG00000001167	RBM12B	85	47.191	ENSSSCG00000006110	RBM12B	59	47.191	Sus_scrofa
ENSIPUG00000001167	RBM12B	72	40.000	ENSTGUG00000011860	RBM12B	96	40.000	Taeniopygia_guttata
ENSIPUG00000001167	RBM12B	97	46.131	ENSTRUG00000013738	rbm12b	100	46.131	Takifugu_rubripes
ENSIPUG00000001167	RBM12B	74	40.856	ENSTBEG00000000449	RBM12B	64	40.856	Tupaia_belangeri
ENSIPUG00000001167	RBM12B	87	47.191	ENSUAMG00000023639	RBM12B	67	47.191	Ursus_americanus
ENSIPUG00000001167	RBM12B	87	47.191	ENSUMAG00000016008	RBM12B	64	47.191	Ursus_maritimus
ENSIPUG00000001167	RBM12B	87	46.067	ENSVVUG00000002694	RBM12B	67	46.067	Vulpes_vulpes
ENSIPUG00000001167	RBM12B	73	31.513	ENSXETG00000025920	-	99	31.381	Xenopus_tropicalis
ENSIPUG00000001167	RBM12B	97	37.408	ENSXETG00000014694	rbm12b	100	39.540	Xenopus_tropicalis
ENSIPUG00000001167	RBM12B	85	40.845	ENSXETG00000014696	rbm12b	99	35.060	Xenopus_tropicalis
ENSIPUG00000001167	RBM12B	97	46.119	ENSXMAG00000014213	rbm12b	100	46.423	Xiphophorus_maculatus