EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001196 (Gene tree)
Gene ID: 100304543
Gene Symbol: rpl29
Alias: -
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2312 bases
Position: chr21:9038180-9040491
Accession: 100304543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001680	Ribosomal_L29e	PF01779.17	1.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001762	-	295	-	ENSIPUP00000001680	64 (aa)	-	Q90YT8

Gene Model

Click here to download ENSIPUG00000001196's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001196	rpl29	72	97.826	ENSG00000162244	RPL29	97	91.667	Homo_sapiens
ENSIPUG00000001196	rpl29	84	90.741	ENSAPOG00000002586	rpl29	97	85.938	Acanthochromis_polyacanthus
ENSIPUG00000001196	rpl29	84	96.296	ENSACIG00000018340	rpl29	100	87.500	Amphilophus_citrinellus
ENSIPUG00000001196	rpl29	84	94.444	ENSAOCG00000016652	rpl29	97	89.062	Amphiprion_ocellaris
ENSIPUG00000001196	rpl29	84	94.444	ENSAPEG00000005754	rpl29	97	89.062	Amphiprion_percula
ENSIPUG00000001196	rpl29	72	97.826	ENSACAG00000006888	RPL29	95	88.710	Anolis_carolinensis
ENSIPUG00000001196	rpl29	72	97.826	ENSANAG00000024147	-	77	80.435	Aotus_nancymaae
ENSIPUG00000001196	rpl29	86	94.545	ENSACLG00000017820	rpl29	86	94.545	Astatotilapia_calliptera
ENSIPUG00000001196	rpl29	100	90.625	ENSAMXG00000038794	rpl29	100	90.625	Astyanax_mexicanus
ENSIPUG00000001196	rpl29	97	58.065	WBGene00004443	rpl-29	100	58.065	Caenorhabditis_elegans
ENSIPUG00000001196	rpl29	72	97.826	ENSCJAG00000042339	-	77	80.435	Callithrix_jacchus
ENSIPUG00000001196	rpl29	72	97.826	ENSCCAG00000027980	-	77	80.435	Cebus_capucinus
ENSIPUG00000001196	rpl29	72	87.234	ENSCSAG00000017871	-	51	86.207	Chlorocebus_sabaeus
ENSIPUG00000001196	rpl29	81	78.846	ENSCING00000018496	-	90	78.846	Ciona_intestinalis
ENSIPUG00000001196	rpl29	81	82.692	ENSCSAVG00000005231	-	88	82.692	Ciona_savignyi
ENSIPUG00000001196	rpl29	72	97.826	ENSCGRG00001016452	-	84	94.737	Cricetulus_griseus_chok1gshd
ENSIPUG00000001196	rpl29	78	94.000	ENSCSEG00000010267	rpl29	97	81.250	Cynoglossus_semilaevis
ENSIPUG00000001196	rpl29	78	98.000	ENSCVAG00000023098	rpl29	100	87.500	Cyprinodon_variegatus
ENSIPUG00000001196	rpl29	100	87.500	ENSDARG00000077717	rpl29	100	87.500	Danio_rerio
ENSIPUG00000001196	rpl29	78	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSIPUG00000001196	rpl29	67	88.372	ENSEASG00005005507	-	66	88.372	Equus_asinus_asinus
ENSIPUG00000001196	rpl29	86	85.455	ENSELUG00000015592	RL29	79	85.455	Esox_lucius
ENSIPUG00000001196	rpl29	97	62.903	ENSFCAG00000043006	-	77	62.903	Felis_catus
ENSIPUG00000001196	rpl29	67	69.767	ENSFCAG00000035470	-	58	68.182	Felis_catus
ENSIPUG00000001196	rpl29	72	95.652	ENSFALG00000008925	RPL29	97	86.364	Ficedula_albicollis
ENSIPUG00000001196	rpl29	100	85.938	ENSFHEG00000015425	rpl29	100	85.938	Fundulus_heteroclitus
ENSIPUG00000001196	rpl29	84	85.185	ENSGMOG00000003626	rpl29	82	79.032	Gadus_morhua
ENSIPUG00000001196	rpl29	72	100.000	ENSGALG00000026978	RPL29	93	89.394	Gallus_gallus
ENSIPUG00000001196	rpl29	100	87.500	ENSGAFG00000012868	rpl29	100	87.500	Gambusia_affinis
ENSIPUG00000001196	rpl29	98	82.540	ENSGACG00000007041	rpl29	82	82.540	Gasterosteus_aculeatus
ENSIPUG00000001196	rpl29	72	77.083	ENSGAGG00000024203	-	89	77.083	Gopherus_agassizii
ENSIPUG00000001196	rpl29	72	97.826	ENSGGOG00000024691	RPL29	60	94.444	Gorilla_gorilla
ENSIPUG00000001196	rpl29	86	94.545	ENSHBUG00000010519	rpl29	86	94.545	Haplochromis_burtoni
ENSIPUG00000001196	rpl29	78	98.000	ENSHCOG00000000478	rpl29	81	88.889	Hippocampus_comes
ENSIPUG00000001196	rpl29	84	96.296	ENSKMAG00000011291	rpl29	100	89.062	Kryptolebias_marmoratus
ENSIPUG00000001196	rpl29	84	88.889	ENSLBEG00000016213	rpl29	99	80.597	Labrus_bergylta
ENSIPUG00000001196	rpl29	100	81.250	ENSLACG00000018622	rpl29	97	81.250	Latimeria_chalumnae
ENSIPUG00000001196	rpl29	86	89.091	ENSLACG00000018031	-	91	81.250	Latimeria_chalumnae
ENSIPUG00000001196	rpl29	72	95.652	ENSLOCG00000013798	rpl29	100	87.692	Lepisosteus_oculatus
ENSIPUG00000001196	rpl29	84	92.593	ENSMAMG00000014274	rpl29	65	85.938	Mastacembelus_armatus
ENSIPUG00000001196	rpl29	86	94.545	ENSMZEG00005013519	rpl29	86	94.545	Maylandia_zebra
ENSIPUG00000001196	rpl29	72	100.000	ENSMGAG00000001213	RPL29	93	89.394	Meleagris_gallopavo
ENSIPUG00000001196	rpl29	77	83.673	ENSMICG00000049466	-	74	83.673	Microcebus_murinus
ENSIPUG00000001196	rpl29	86	92.727	ENSMMOG00000010430	rpl29	86	92.727	Mola_mola
ENSIPUG00000001196	rpl29	84	92.593	ENSMALG00000009023	rpl29	79	85.938	Monopterus_albus
ENSIPUG00000001196	rpl29	72	97.826	ENSMUSG00000048758	Rpl29	91	88.710	Mus_musculus
ENSIPUG00000001196	rpl29	86	94.545	ENSNBRG00000022109	rpl29	86	94.545	Neolamprologus_brichardi
ENSIPUG00000001196	rpl29	86	94.545	ENSONIG00000014377	rpl29	87	94.545	Oreochromis_niloticus
ENSIPUG00000001196	rpl29	86	92.727	ENSORLG00000023610	rpl29	58	92.727	Oryzias_latipes
ENSIPUG00000001196	rpl29	86	92.727	ENSORLG00020018665	rpl29	58	92.727	Oryzias_latipes_hni
ENSIPUG00000001196	rpl29	86	92.727	ENSORLG00015014455	rpl29	58	92.727	Oryzias_latipes_hsok
ENSIPUG00000001196	rpl29	86	94.545	ENSOMEG00000019919	rpl29	86	94.545	Oryzias_melastigma
ENSIPUG00000001196	rpl29	56	94.444	ENSPPAG00000037142	-	61	94.444	Pan_paniscus
ENSIPUG00000001196	rpl29	95	68.852	ENSPPRG00000011689	-	88	68.421	Panthera_pardus
ENSIPUG00000001196	rpl29	95	67.213	ENSPTIG00000011913	-	74	67.213	Panthera_tigris_altaica
ENSIPUG00000001196	rpl29	72	97.826	ENSPTRG00000043237	RPL29	61	94.444	Pan_troglodytes
ENSIPUG00000001196	rpl29	72	95.652	ENSPKIG00000025048	rpl29	100	87.879	Paramormyrops_kingsleyae
ENSIPUG00000001196	rpl29	72	97.826	ENSPSIG00000014699	RPL29	90	94.737	Pelodiscus_sinensis
ENSIPUG00000001196	rpl29	86	89.091	ENSPMGG00000005361	rpl29	81	89.091	Periophthalmus_magnuspinnatus
ENSIPUG00000001196	rpl29	86	96.364	ENSPFOG00000011385	rpl29	90	96.364	Poecilia_formosa
ENSIPUG00000001196	rpl29	78	96.000	ENSPLAG00000012042	rpl29	100	85.938	Poecilia_latipinna
ENSIPUG00000001196	rpl29	78	98.000	ENSPMEG00000018297	rpl29	100	87.500	Poecilia_mexicana
ENSIPUG00000001196	rpl29	78	98.000	ENSPREG00000007066	rpl29	100	87.500	Poecilia_reticulata
ENSIPUG00000001196	rpl29	86	94.545	ENSPNYG00000019481	rpl29	86	94.545	Pundamilia_nyererei
ENSIPUG00000001196	rpl29	100	90.625	ENSPNAG00000007550	rpl29	100	90.625	Pygocentrus_nattereri
ENSIPUG00000001196	rpl29	81	86.538	ENSRNOG00000025794	AABR07021239.1	69	86.538	Rattus_norvegicus
ENSIPUG00000001196	rpl29	72	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSIPUG00000001196	rpl29	84	92.593	ENSSMAG00000013571	rpl29	100	85.938	Scophthalmus_maximus
ENSIPUG00000001196	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSIPUG00000001196	rpl29	78	94.000	ENSSDUG00000016140	rpl29	97	84.375	Seriola_dumerili
ENSIPUG00000001196	rpl29	78	94.000	ENSSLDG00000003932	rpl29	97	84.375	Seriola_lalandi_dorsalis
ENSIPUG00000001196	rpl29	72	100.000	ENSSPUG00000003760	RPL29	98	90.323	Sphenodon_punctatus
ENSIPUG00000001196	rpl29	84	88.889	ENSSPAG00000020292	rpl29	97	82.812	Stegastes_partitus
ENSIPUG00000001196	rpl29	88	69.643	ENSSSCG00000031314	-	89	69.643	Sus_scrofa
ENSIPUG00000001196	rpl29	59	92.105	ENSSSCG00000037047	-	100	89.796	Sus_scrofa
ENSIPUG00000001196	rpl29	72	95.652	ENSTGUG00000006027	RPL29	98	87.097	Taeniopygia_guttata
ENSIPUG00000001196	rpl29	97	80.645	ENSTRUG00000022273	rpl29	95	80.645	Takifugu_rubripes
ENSIPUG00000001196	rpl29	83	92.453	ENSTNIG00000014816	rpl29	81	90.909	Tetraodon_nigroviridis
ENSIPUG00000001196	rpl29	88	80.357	ENSTBEG00000000807	-	68	80.357	Tupaia_belangeri
ENSIPUG00000001196	rpl29	75	93.750	ENSUAMG00000002601	-	84	93.750	Ursus_americanus
ENSIPUG00000001196	rpl29	72	91.304	ENSVVUG00000012400	-	100	89.474	Vulpes_vulpes
ENSIPUG00000001196	rpl29	72	97.826	ENSXETG00000010811	rpl29	83	87.097	Xenopus_tropicalis
ENSIPUG00000001196	rpl29	86	96.364	ENSXCOG00000013543	rpl29	86	96.364	Xiphophorus_couchianus
ENSIPUG00000001196	rpl29	100	87.500	ENSXMAG00000020948	rpl29	100	87.500	Xiphophorus_maculatus