EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001227 (Gene tree)
Gene ID: 108254864
Gene Symbol: POC1A
Alias: wdr51a|wu:fl82d01|zgc:56055
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 22949 bases
Position: chr21:9077138-9100086
Accession: 108254864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001744	eIF2A	PF08662.11	8.4e-09	1	1
ENSIPUP00000001760	eIF2A	PF08662.11	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001829	-	1167	-	ENSIPUP00000001744	388 (aa)	-	-
ENSIPUT00000001846	-	1642	XM_017450253	ENSIPUP00000001760	428 (aa)	XP_017305742	W5UB27

Gene Model

Click here to download ENSIPUG00000001227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001227	POC1A	76	30.688	ENSIPUG00000014671	wdr61	96	32.414
ENSIPUG00000001227	POC1A	76	30.500	ENSIPUG00000017956	PRPF4	58	30.500
ENSIPUG00000001227	POC1A	85	30.180	ENSIPUG00000003568	TBL3	67	30.180
ENSIPUG00000001227	POC1A	81	33.205	ENSIPUG00000012532	wdr5	91	34.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001227	POC1A	96	75.490	ENSG00000164087	POC1A	98	69.146	Homo_sapiens
ENSIPUG00000001227	POC1A	96	79.775	ENSAPOG00000002677	POC1A	99	79.775	Acanthochromis_polyacanthus
ENSIPUG00000001227	POC1A	96	67.067	ENSAMEG00000009136	POC1A	96	67.595	Ailuropoda_melanoleuca
ENSIPUG00000001227	POC1A	99	62.896	ENSACIG00000018288	poc1a	100	62.896	Amphilophus_citrinellus
ENSIPUG00000001227	POC1A	96	79.259	ENSAOCG00000001066	POC1A	100	79.775	Amphiprion_ocellaris
ENSIPUG00000001227	POC1A	98	68.766	ENSAPEG00000005795	poc1a	97	79.730	Amphiprion_percula
ENSIPUG00000001227	POC1A	96	69.249	ENSAPLG00000007756	POC1A	99	68.765	Anas_platyrhynchos
ENSIPUG00000001227	POC1A	96	72.843	ENSANAG00000030897	POC1A	98	67.920	Aotus_nancymaae
ENSIPUG00000001227	POC1A	97	69.657	ENSACLG00000017869	POC1A	99	78.966	Astatotilapia_calliptera
ENSIPUG00000001227	POC1A	76	82.746	ENSAMXG00000024703	poc1a	85	81.271	Astyanax_mexicanus
ENSIPUG00000001227	POC1A	95	72.507	ENSBTAG00000001471	POC1A	97	72.507	Bos_taurus
ENSIPUG00000001227	POC1A	96	74.837	ENSCJAG00000005972	POC1A	98	67.920	Callithrix_jacchus
ENSIPUG00000001227	POC1A	96	67.733	ENSCAFG00020022379	POC1A	98	67.733	Canis_lupus_dingo
ENSIPUG00000001227	POC1A	96	69.007	ENSCHIG00000002571	POC1A	97	69.367	Capra_hircus
ENSIPUG00000001227	POC1A	96	67.548	ENSTSYG00000008302	POC1A	97	68.434	Carlito_syrichta
ENSIPUG00000001227	POC1A	88	66.092	ENSCAPG00000016201	POC1A	89	66.092	Cavia_aperea
ENSIPUG00000001227	POC1A	97	72.611	ENSCPOG00000006740	POC1A	97	67.848	Cavia_porcellus
ENSIPUG00000001227	POC1A	96	73.482	ENSCCAG00000023380	POC1A	98	68.170	Cebus_capucinus
ENSIPUG00000001227	POC1A	96	70.106	ENSCATG00000021822	POC1A	98	70.106	Cercocebus_atys
ENSIPUG00000001227	POC1A	97	66.352	ENSCLAG00000010593	POC1A	98	65.789	Chinchilla_lanigera
ENSIPUG00000001227	POC1A	94	66.406	ENSCSAG00000013862	POC1A	98	68.595	Chlorocebus_sabaeus
ENSIPUG00000001227	POC1A	76	79.779	ENSCPBG00000016728	POC1A	98	79.779	Chrysemys_picta_bellii
ENSIPUG00000001227	POC1A	94	69.424	ENSCSAVG00000008477	-	98	60.053	Ciona_savignyi
ENSIPUG00000001227	POC1A	96	68.449	ENSCANG00000033064	POC1A	98	68.871	Colobus_angolensis_palliatus
ENSIPUG00000001227	POC1A	95	67.939	ENSCGRG00001007357	Poc1a	97	67.939	Cricetulus_griseus_chok1gshd
ENSIPUG00000001227	POC1A	97	64.948	ENSCSEG00000010287	POC1A	97	63.959	Cynoglossus_semilaevis
ENSIPUG00000001227	POC1A	98	65.957	ENSCVAG00000015594	POC1A	99	76.451	Cyprinodon_variegatus
ENSIPUG00000001227	POC1A	75	59.655	ENSEBUG00000008013	poc1a	84	59.864	Eptatretus_burgeri
ENSIPUG00000001227	POC1A	96	66.897	ENSEBUG00000002614	POC1A	94	67.110	Eptatretus_burgeri
ENSIPUG00000001227	POC1A	59	57.432	ENSEBUG00000008246	POC1A	54	58.621	Eptatretus_burgeri
ENSIPUG00000001227	POC1A	97	70.543	ENSELUG00000015504	poc1a	99	71.576	Esox_lucius
ENSIPUG00000001227	POC1A	96	68.170	ENSFCAG00000015704	POC1A	98	68.170	Felis_catus
ENSIPUG00000001227	POC1A	96	67.640	ENSFALG00000008922	POC1A	97	67.939	Ficedula_albicollis
ENSIPUG00000001227	POC1A	98	73.633	ENSFDAG00000011606	POC1A	99	66.667	Fukomys_damarensis
ENSIPUG00000001227	POC1A	98	66.667	ENSFHEG00000015504	POC1A	99	76.552	Fundulus_heteroclitus
ENSIPUG00000001227	POC1A	96	67.233	ENSGALG00000034572	-	99	66.125	Gallus_gallus
ENSIPUG00000001227	POC1A	98	69.212	ENSGACG00000007015	poc1a	98	68.160	Gasterosteus_aculeatus
ENSIPUG00000001227	POC1A	96	69.660	ENSGAGG00000014637	POC1A	97	68.689	Gopherus_agassizii
ENSIPUG00000001227	POC1A	96	74.839	ENSGGOG00000006652	POC1A	98	68.421	Gorilla_gorilla
ENSIPUG00000001227	POC1A	96	67.337	ENSHGLG00000013436	POC1A	98	67.337	Heterocephalus_glaber_female
ENSIPUG00000001227	POC1A	96	67.337	ENSHGLG00100003479	POC1A	98	67.337	Heterocephalus_glaber_male
ENSIPUG00000001227	POC1A	97	73.567	ENSSTOG00000002638	POC1A	98	67.419	Ictidomys_tridecemlineatus
ENSIPUG00000001227	POC1A	96	68.106	ENSJJAG00000018739	Poc1a	97	68.608	Jaculus_jaculus
ENSIPUG00000001227	POC1A	99	61.538	ENSLBEG00000016119	POC1A	99	77.241	Labrus_bergylta
ENSIPUG00000001227	POC1A	98	68.721	ENSLACG00000018788	POC1A	92	80.887	Latimeria_chalumnae
ENSIPUG00000001227	POC1A	98	73.333	ENSLOCG00000013801	poc1a	98	73.095	Lepisosteus_oculatus
ENSIPUG00000001227	POC1A	95	63.797	ENSLAFG00000028434	POC1A	99	70.569	Loxodonta_africana
ENSIPUG00000001227	POC1A	93	68.320	ENSMFAG00000001970	POC1A	98	68.320	Macaca_fascicularis
ENSIPUG00000001227	POC1A	96	67.920	ENSMMUG00000012485	POC1A	98	67.920	Macaca_mulatta
ENSIPUG00000001227	POC1A	93	68.320	ENSMNEG00000042811	POC1A	98	68.320	Macaca_nemestrina
ENSIPUG00000001227	POC1A	96	67.914	ENSMLEG00000039574	POC1A	98	68.320	Mandrillus_leucophaeus
ENSIPUG00000001227	POC1A	98	78.652	ENSMAMG00000014233	POC1A	99	78.652	Mastacembelus_armatus
ENSIPUG00000001227	POC1A	98	62.179	ENSMZEG00005013503	POC1A	99	78.966	Maylandia_zebra
ENSIPUG00000001227	POC1A	96	75.593	ENSMGAG00000001628	POC1A	98	75.593	Meleagris_gallopavo
ENSIPUG00000001227	POC1A	96	68.262	ENSMAUG00000017403	Poc1a	99	68.262	Mesocricetus_auratus
ENSIPUG00000001227	POC1A	96	69.598	ENSMICG00000002709	POC1A	98	69.598	Microcebus_murinus
ENSIPUG00000001227	POC1A	90	66.923	ENSMOCG00000003396	Poc1a	98	68.579	Microtus_ochrogaster
ENSIPUG00000001227	POC1A	98	68.912	ENSMMOG00000010427	poc1a	96	68.912	Mola_mola
ENSIPUG00000001227	POC1A	90	67.013	ENSMODG00000011717	POC1A	97	66.578	Monodelphis_domestica
ENSIPUG00000001227	POC1A	99	68.407	ENSMALG00000009054	poc1a	95	75.000	Monopterus_albus
ENSIPUG00000001227	POC1A	95	67.939	MGP_CAROLIEiJ_G0032617	Poc1a	97	67.939	Mus_caroli
ENSIPUG00000001227	POC1A	95	67.939	ENSMUSG00000023345	Poc1a	92	75.725	Mus_musculus
ENSIPUG00000001227	POC1A	96	67.312	MGP_PahariEiJ_G0015485	Poc1a	97	67.939	Mus_pahari
ENSIPUG00000001227	POC1A	95	67.939	MGP_SPRETEiJ_G0033763	Poc1a	97	67.939	Mus_spretus
ENSIPUG00000001227	POC1A	96	67.548	ENSMPUG00000011723	POC1A	98	67.419	Mustela_putorius_furo
ENSIPUG00000001227	POC1A	95	68.608	ENSMLUG00000015092	POC1A	90	68.608	Myotis_lucifugus
ENSIPUG00000001227	POC1A	95	69.543	ENSNGAG00000005212	Poc1a	97	69.543	Nannospalax_galili
ENSIPUG00000001227	POC1A	99	64.403	ENSNBRG00000022135	poc1a	99	63.616	Neolamprologus_brichardi
ENSIPUG00000001227	POC1A	96	74.510	ENSNLEG00000007084	POC1A	98	68.320	Nomascus_leucogenys
ENSIPUG00000001227	POC1A	85	66.438	ENSMEUG00000007715	-	71	66.438	Notamacropus_eugenii
ENSIPUG00000001227	POC1A	93	67.213	ENSOPRG00000008831	POC1A	90	67.213	Ochotona_princeps
ENSIPUG00000001227	POC1A	96	67.308	ENSODEG00000018290	POC1A	98	67.929	Octodon_degus
ENSIPUG00000001227	POC1A	98	62.393	ENSONIG00000014378	POC1A	98	78.276	Oreochromis_niloticus
ENSIPUG00000001227	POC1A	94	67.188	ENSOCUG00000002080	POC1A	98	68.044	Oryctolagus_cuniculus
ENSIPUG00000001227	POC1A	98	61.688	ENSOMEG00000019834	POC1A	98	77.586	Oryzias_melastigma
ENSIPUG00000001227	POC1A	96	63.876	ENSOGAG00000032245	POC1A	97	64.975	Otolemur_garnettii
ENSIPUG00000001227	POC1A	96	69.249	ENSOARG00000006352	POC1A	97	69.367	Ovis_aries
ENSIPUG00000001227	POC1A	96	75.490	ENSPPAG00000043583	POC1A	98	69.697	Pan_paniscus
ENSIPUG00000001227	POC1A	96	68.170	ENSPPRG00000003365	POC1A	98	68.170	Panthera_pardus
ENSIPUG00000001227	POC1A	94	67.969	ENSPTIG00000005388	POC1A	98	68.595	Panthera_tigris_altaica
ENSIPUG00000001227	POC1A	96	75.490	ENSPTRG00000014989	POC1A	98	69.146	Pan_troglodytes
ENSIPUG00000001227	POC1A	79	77.104	ENSPSIG00000014809	POC1A	88	78.964	Pelodiscus_sinensis
ENSIPUG00000001227	POC1A	98	67.677	ENSPMGG00000005356	poc1a	99	67.677	Periophthalmus_magnuspinnatus
ENSIPUG00000001227	POC1A	90	67.183	ENSPEMG00000024131	Poc1a	94	75.817	Peromyscus_maniculatus_bairdii
ENSIPUG00000001227	POC1A	94	76.976	ENSPMAG00000000333	poc1a	97	76.976	Petromyzon_marinus
ENSIPUG00000001227	POC1A	96	69.773	ENSPCIG00000018160	POC1A	98	69.773	Phascolarctos_cinereus
ENSIPUG00000001227	POC1A	96	68.421	ENSPPYG00000013816	POC1A	98	68.421	Pongo_abelii
ENSIPUG00000001227	POC1A	96	68.421	ENSPCAG00000002118	POC1A	98	68.421	Procavia_capensis
ENSIPUG00000001227	POC1A	96	67.914	ENSPCOG00000012625	POC1A	98	69.890	Propithecus_coquereli
ENSIPUG00000001227	POC1A	77	65.886	ENSPVAG00000012480	POC1A	79	64.798	Pteropus_vampyrus
ENSIPUG00000001227	POC1A	99	67.059	ENSPNYG00000019517	poc1a	99	68.828	Pundamilia_nyererei
ENSIPUG00000001227	POC1A	98	70.070	ENSPNAG00000007556	POC1A	98	70.139	Pygocentrus_nattereri
ENSIPUG00000001227	POC1A	93	67.127	ENSRNOG00000037295	Poc1a	98	67.127	Rattus_norvegicus
ENSIPUG00000001227	POC1A	96	68.449	ENSRBIG00000031748	POC1A	98	68.871	Rhinopithecus_bieti
ENSIPUG00000001227	POC1A	96	68.182	ENSRROG00000044472	POC1A	98	68.595	Rhinopithecus_roxellana
ENSIPUG00000001227	POC1A	96	73.163	ENSSBOG00000027902	POC1A	98	68.871	Saimiri_boliviensis_boliviensis
ENSIPUG00000001227	POC1A	96	77.528	ENSSMAG00000013505	POC1A	99	77.528	Scophthalmus_maximus
ENSIPUG00000001227	POC1A	94	77.816	ENSSDUG00000016161	POC1A	99	78.276	Seriola_dumerili
ENSIPUG00000001227	POC1A	99	76.792	ENSSLDG00000003828	POC1A	99	77.740	Seriola_lalandi_dorsalis
ENSIPUG00000001227	POC1A	87	86.364	ENSSPUG00000008656	POC1A	99	78.378	Sphenodon_punctatus
ENSIPUG00000001227	POC1A	99	57.746	ENSSPAG00000020330	POC1A	95	58.432	Stegastes_partitus
ENSIPUG00000001227	POC1A	96	68.039	ENSSSCG00000011426	POC1A	97	68.608	Sus_scrofa
ENSIPUG00000001227	POC1A	96	65.693	ENSTGUG00000006036	POC1A	98	65.207	Taeniopygia_guttata
ENSIPUG00000001227	POC1A	95	64.578	ENSTRUG00000007900	POC1A	97	64.578	Takifugu_rubripes
ENSIPUG00000001227	POC1A	97	74.570	ENSTNIG00000014818	POC1A	99	74.570	Tetraodon_nigroviridis
ENSIPUG00000001227	POC1A	96	67.758	ENSTTRG00000016798	POC1A	98	67.758	Tursiops_truncatus
ENSIPUG00000001227	POC1A	96	67.554	ENSUAMG00000020816	POC1A	92	74.729	Ursus_americanus
ENSIPUG00000001227	POC1A	94	67.717	ENSUMAG00000021482	POC1A	98	68.320	Ursus_maritimus
ENSIPUG00000001227	POC1A	94	75.601	ENSXETG00000010813	poc1a	98	62.838	Xenopus_tropicalis