EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001247 (Gene tree)
Gene ID: 108271923
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 59862 bases
Position: chr11:24002240-24062101
Accession: 108271923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001766	SHQ1	PF04925.15	6.6e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001852	-	3918	XM_017479886	ENSIPUP00000001766	576 (aa)	XP_017335375	W5U666

Gene Model

Click here to download ENSIPUG00000001247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001247	shq1	70	58.373	ENSG00000144736	SHQ1	100	72.000	Homo_sapiens
ENSIPUG00000001247	shq1	74	66.512	ENSAPOG00000000397	shq1	70	66.512	Acanthochromis_polyacanthus
ENSIPUG00000001247	shq1	94	48.480	ENSAMEG00000015140	SHQ1	77	57.906	Ailuropoda_melanoleuca
ENSIPUG00000001247	shq1	92	55.575	ENSACIG00000021249	shq1	72	66.667	Amphilophus_citrinellus
ENSIPUG00000001247	shq1	75	68.591	ENSATEG00000008475	shq1	72	68.591	Anabas_testudineus
ENSIPUG00000001247	shq1	81	54.098	ENSAPLG00000013926	SHQ1	92	55.814	Anas_platyrhynchos
ENSIPUG00000001247	shq1	73	57.407	ENSACAG00000014809	SHQ1	65	57.596	Anolis_carolinensis
ENSIPUG00000001247	shq1	96	48.621	ENSANAG00000029241	SHQ1	75	57.631	Aotus_nancymaae
ENSIPUG00000001247	shq1	81	42.767	ENSANAG00000030500	-	74	44.368	Aotus_nancymaae
ENSIPUG00000001247	shq1	76	66.667	ENSACLG00000023077	shq1	70	66.667	Astatotilapia_calliptera
ENSIPUG00000001247	shq1	74	78.169	ENSAMXG00000043822	shq1	92	68.431	Astyanax_mexicanus
ENSIPUG00000001247	shq1	68	59.500	ENSBTAG00000005436	SHQ1	75	59.132	Bos_taurus
ENSIPUG00000001247	shq1	73	31.651	WBGene00021655	Y48A5A.1	97	31.663	Caenorhabditis_elegans
ENSIPUG00000001247	shq1	70	58.273	ENSCJAG00000015131	SHQ1	75	57.763	Callithrix_jacchus
ENSIPUG00000001247	shq1	68	58.750	ENSCAFG00000006434	SHQ1	76	57.461	Canis_familiaris
ENSIPUG00000001247	shq1	68	58.750	ENSCAFG00020016743	SHQ1	76	57.461	Canis_lupus_dingo
ENSIPUG00000001247	shq1	91	50.000	ENSCHIG00000012271	SHQ1	68	59.132	Capra_hircus
ENSIPUG00000001247	shq1	70	57.729	ENSTSYG00000014439	SHQ1	75	57.471	Carlito_syrichta
ENSIPUG00000001247	shq1	82	46.526	ENSCAPG00000009343	SHQ1	71	52.507	Cavia_aperea
ENSIPUG00000001247	shq1	71	57.518	ENSCPOG00000011443	SHQ1	74	57.895	Cavia_porcellus
ENSIPUG00000001247	shq1	70	49.282	ENSCCAG00000027080	SHQ1	73	49.203	Cebus_capucinus
ENSIPUG00000001247	shq1	86	42.604	ENSCCAG00000036087	-	74	44.828	Cebus_capucinus
ENSIPUG00000001247	shq1	70	58.612	ENSCATG00000041238	SHQ1	75	58.087	Cercocebus_atys
ENSIPUG00000001247	shq1	76	57.428	ENSCLAG00000004206	SHQ1	78	57.522	Chinchilla_lanigera
ENSIPUG00000001247	shq1	55	55.319	ENSCSAG00000011514	SHQ1	70	54.857	Chlorocebus_sabaeus
ENSIPUG00000001247	shq1	78	55.603	ENSCPBG00000006441	SHQ1	75	57.204	Chrysemys_picta_bellii
ENSIPUG00000001247	shq1	68	39.848	ENSCING00000008013	-	96	40.138	Ciona_intestinalis
ENSIPUG00000001247	shq1	67	37.852	ENSCSAVG00000002332	-	99	36.712	Ciona_savignyi
ENSIPUG00000001247	shq1	95	49.912	ENSCANG00000039295	SHQ1	76	58.087	Colobus_angolensis_palliatus
ENSIPUG00000001247	shq1	75	59.417	ENSCGRG00001012583	Shq1	77	59.193	Cricetulus_griseus_chok1gshd
ENSIPUG00000001247	shq1	75	59.417	ENSCGRG00000009849	Shq1	77	59.193	Cricetulus_griseus_crigri
ENSIPUG00000001247	shq1	74	64.733	ENSCVAG00000020049	shq1	74	64.583	Cyprinodon_variegatus
ENSIPUG00000001247	shq1	98	59.478	ENSDARG00000058522	shq1	88	62.715	Danio_rerio
ENSIPUG00000001247	shq1	70	58.513	ENSDNOG00000033937	SHQ1	76	58.087	Dasypus_novemcinctus
ENSIPUG00000001247	shq1	70	52.885	ENSETEG00000005766	SHQ1	76	52.174	Echinops_telfairi
ENSIPUG00000001247	shq1	64	47.326	ENSEBUG00000005445	shq1	78	48.696	Eptatretus_burgeri
ENSIPUG00000001247	shq1	77	56.923	ENSEASG00005002237	SHQ1	77	56.954	Equus_asinus_asinus
ENSIPUG00000001247	shq1	77	56.923	ENSECAG00000015673	SHQ1	76	56.954	Equus_caballus
ENSIPUG00000001247	shq1	70	59.712	ENSEEUG00000010568	SHQ1	76	59.361	Erinaceus_europaeus
ENSIPUG00000001247	shq1	70	69.853	ENSELUG00000003476	shq1	81	66.754	Esox_lucius
ENSIPUG00000001247	shq1	81	55.556	ENSFCAG00000012781	SHQ1	76	58.314	Felis_catus
ENSIPUG00000001247	shq1	71	60.333	ENSFALG00000013428	SHQ1	73	58.940	Ficedula_albicollis
ENSIPUG00000001247	shq1	77	56.388	ENSFDAG00000005595	SHQ1	69	56.763	Fukomys_damarensis
ENSIPUG00000001247	shq1	67	66.667	ENSGMOG00000007350	shq1	100	66.154	Gadus_morhua
ENSIPUG00000001247	shq1	76	57.016	ENSGALG00000007798	SHQ1	73	57.016	Gallus_gallus
ENSIPUG00000001247	shq1	67	66.067	ENSGACG00000011797	shq1	100	66.324	Gasterosteus_aculeatus
ENSIPUG00000001247	shq1	70	58.134	ENSGGOG00000034818	SHQ1	75	57.631	Gorilla_gorilla
ENSIPUG00000001247	shq1	92	56.239	ENSHBUG00000010857	shq1	94	56.162	Haplochromis_burtoni
ENSIPUG00000001247	shq1	70	57.794	ENSHGLG00000003637	SHQ1	70	56.541	Heterocephalus_glaber_female
ENSIPUG00000001247	shq1	70	57.794	ENSHGLG00100011957	SHQ1	70	56.541	Heterocephalus_glaber_male
ENSIPUG00000001247	shq1	92	55.197	ENSHCOG00000010799	shq1	95	54.480	Hippocampus_comes
ENSIPUG00000001247	shq1	71	57.957	ENSSTOG00000010043	SHQ1	79	56.720	Ictidomys_tridecemlineatus
ENSIPUG00000001247	shq1	70	57.794	ENSJJAG00000017611	Shq1	78	56.920	Jaculus_jaculus
ENSIPUG00000001247	shq1	89	55.963	ENSKMAG00000004457	shq1	95	54.804	Kryptolebias_marmoratus
ENSIPUG00000001247	shq1	74	59.773	ENSLACG00000014243	SHQ1	66	59.773	Latimeria_chalumnae
ENSIPUG00000001247	shq1	76	62.500	ENSLOCG00000009970	shq1	77	62.277	Lepisosteus_oculatus
ENSIPUG00000001247	shq1	70	58.852	ENSMFAG00000039148	SHQ1	75	58.314	Macaca_fascicularis
ENSIPUG00000001247	shq1	70	41.278	ENSMFAG00000037396	-	74	40.411	Macaca_fascicularis
ENSIPUG00000001247	shq1	77	40.991	ENSMMUG00000021761	-	74	40.411	Macaca_mulatta
ENSIPUG00000001247	shq1	62	56.486	ENSMMUG00000009571	SHQ1	70	56.010	Macaca_mulatta
ENSIPUG00000001247	shq1	70	58.852	ENSMNEG00000032667	SHQ1	75	58.314	Macaca_nemestrina
ENSIPUG00000001247	shq1	70	58.373	ENSMLEG00000038493	SHQ1	75	57.859	Mandrillus_leucophaeus
ENSIPUG00000001247	shq1	92	56.162	ENSMZEG00005008649	shq1	73	66.667	Maylandia_zebra
ENSIPUG00000001247	shq1	76	57.080	ENSMGAG00000009640	SHQ1	74	57.080	Meleagris_gallopavo
ENSIPUG00000001247	shq1	74	60.181	ENSMAUG00000022030	Shq1	71	66.250	Mesocricetus_auratus
ENSIPUG00000001247	shq1	80	55.391	ENSMICG00000009224	SHQ1	76	57.366	Microcebus_murinus
ENSIPUG00000001247	shq1	74	59.729	ENSMOCG00000017836	Shq1	72	65.000	Microtus_ochrogaster
ENSIPUG00000001247	shq1	74	66.357	ENSMMOG00000010569	shq1	73	66.357	Mola_mola
ENSIPUG00000001247	shq1	76	56.570	ENSMODG00000003926	SHQ1	80	56.027	Monodelphis_domestica
ENSIPUG00000001247	shq1	88	58.379	ENSMALG00000008870	shq1	72	67.209	Monopterus_albus
ENSIPUG00000001247	shq1	74	60.046	MGP_CAROLIEiJ_G0028689	Shq1	76	60.046	Mus_caroli
ENSIPUG00000001247	shq1	74	59.050	ENSMUSG00000035378	Shq1	76	59.050	Mus_musculus
ENSIPUG00000001247	shq1	74	59.955	MGP_PahariEiJ_G0022440	Shq1	76	59.955	Mus_pahari
ENSIPUG00000001247	shq1	85	55.098	MGP_SPRETEiJ_G0029717	Shq1	76	59.276	Mus_spretus
ENSIPUG00000001247	shq1	77	57.616	ENSMPUG00000017006	SHQ1	76	57.837	Mustela_putorius_furo
ENSIPUG00000001247	shq1	66	56.345	ENSMLUG00000013539	SHQ1	74	56.345	Myotis_lucifugus
ENSIPUG00000001247	shq1	91	47.378	ENSNGAG00000023317	Shq1	78	53.531	Nannospalax_galili
ENSIPUG00000001247	shq1	75	52.431	ENSNBRG00000024004	shq1	93	52.401	Neolamprologus_brichardi
ENSIPUG00000001247	shq1	95	49.912	ENSNLEG00000002731	SHQ1	75	58.087	Nomascus_leucogenys
ENSIPUG00000001247	shq1	66	57.407	ENSMEUG00000009350	-	73	57.407	Notamacropus_eugenii
ENSIPUG00000001247	shq1	91	50.547	ENSODEG00000009192	SHQ1	100	50.547	Octodon_degus
ENSIPUG00000001247	shq1	76	66.667	ENSONIG00000020264	shq1	94	56.063	Oreochromis_niloticus
ENSIPUG00000001247	shq1	90	51.648	ENSOCUG00000016695	SHQ1	74	58.770	Oryctolagus_cuniculus
ENSIPUG00000001247	shq1	74	66.276	ENSORLG00000023538	shq1	78	65.972	Oryzias_latipes
ENSIPUG00000001247	shq1	74	66.745	ENSORLG00020003697	shq1	78	66.435	Oryzias_latipes_hni
ENSIPUG00000001247	shq1	74	66.511	ENSORLG00015021040	shq1	80	65.000	Oryzias_latipes_hsok
ENSIPUG00000001247	shq1	74	66.432	ENSOMEG00000001225	shq1	78	66.051	Oryzias_melastigma
ENSIPUG00000001247	shq1	81	53.512	ENSOGAG00000003898	SHQ1	78	55.263	Otolemur_garnettii
ENSIPUG00000001247	shq1	70	57.619	ENSOARG00000009547	SHQ1	75	58.014	Ovis_aries
ENSIPUG00000001247	shq1	70	58.612	ENSPPAG00000027714	SHQ1	75	58.087	Pan_paniscus
ENSIPUG00000001247	shq1	82	39.588	ENSPPAG00000043263	-	76	40.625	Pan_paniscus
ENSIPUG00000001247	shq1	81	55.761	ENSPPRG00000004769	SHQ1	76	58.314	Panthera_pardus
ENSIPUG00000001247	shq1	81	53.542	ENSPTIG00000011478	SHQ1	75	55.889	Panthera_tigris_altaica
ENSIPUG00000001247	shq1	82	39.545	ENSPTRG00000048303	-	76	40.359	Pan_troglodytes
ENSIPUG00000001247	shq1	70	58.612	ENSPTRG00000015106	SHQ1	75	58.087	Pan_troglodytes
ENSIPUG00000001247	shq1	70	58.134	ENSPANG00000002881	SHQ1	75	58.087	Papio_anubis
ENSIPUG00000001247	shq1	73	69.976	ENSPKIG00000021517	shq1	78	66.892	Paramormyrops_kingsleyae
ENSIPUG00000001247	shq1	77	58.150	ENSPSIG00000005536	SHQ1	72	58.957	Pelodiscus_sinensis
ENSIPUG00000001247	shq1	74	63.953	ENSPMGG00000008838	shq1	73	63.721	Periophthalmus_magnuspinnatus
ENSIPUG00000001247	shq1	70	60.911	ENSPEMG00000000251	Shq1	71	66.250	Peromyscus_maniculatus_bairdii
ENSIPUG00000001247	shq1	74	57.306	ENSPMAG00000005372	shq1	98	57.534	Petromyzon_marinus
ENSIPUG00000001247	shq1	74	63.972	ENSPFOG00000003118	shq1	80	63.510	Poecilia_formosa
ENSIPUG00000001247	shq1	59	61.111	ENSPMEG00000011076	shq1	76	61.111	Poecilia_mexicana
ENSIPUG00000001247	shq1	66	61.842	ENSPREG00000000591	shq1	92	53.783	Poecilia_reticulata
ENSIPUG00000001247	shq1	92	50.547	ENSPPYG00000013717	SHQ1	75	58.314	Pongo_abelii
ENSIPUG00000001247	shq1	71	59.762	ENSPCAG00000009035	SHQ1	76	59.132	Procavia_capensis
ENSIPUG00000001247	shq1	70	57.177	ENSPCOG00000008415	SHQ1	75	58.182	Propithecus_coquereli
ENSIPUG00000001247	shq1	70	58.134	ENSPVAG00000017392	SHQ1	76	57.631	Pteropus_vampyrus
ENSIPUG00000001247	shq1	92	56.063	ENSPNYG00000003878	shq1	94	56.415	Pundamilia_nyererei
ENSIPUG00000001247	shq1	96	68.089	ENSPNAG00000026840	shq1	96	68.430	Pygocentrus_nattereri
ENSIPUG00000001247	shq1	74	60.046	ENSRNOG00000005433	Shq1	72	60.046	Rattus_norvegicus
ENSIPUG00000001247	shq1	95	48.393	ENSRBIG00000026280	SHQ1	75	56.308	Rhinopithecus_bieti
ENSIPUG00000001247	shq1	95	49.737	ENSRROG00000034126	SHQ1	76	57.859	Rhinopithecus_roxellana
ENSIPUG00000001247	shq1	70	50.600	ENSSBOG00000021038	SHQ1	73	49.886	Saimiri_boliviensis_boliviensis
ENSIPUG00000001247	shq1	82	53.799	ENSSHAG00000015077	SHQ1	79	56.319	Sarcophilus_harrisii
ENSIPUG00000001247	shq1	88	62.083	ENSSFOG00015016241	shq1	90	62.549	Scleropages_formosus
ENSIPUG00000001247	shq1	88	56.673	ENSSMAG00000016151	shq1	98	55.008	Scophthalmus_maximus
ENSIPUG00000001247	shq1	91	54.701	ENSSDUG00000011986	shq1	71	68.056	Seriola_dumerili
ENSIPUG00000001247	shq1	91	54.983	ENSSLDG00000013908	shq1	70	67.053	Seriola_lalandi_dorsalis
ENSIPUG00000001247	shq1	87	43.284	ENSSARG00000007119	SHQ1	79	46.548	Sorex_araneus
ENSIPUG00000001247	shq1	59	56.250	ENSSPUG00000011526	-	65	56.250	Sphenodon_punctatus
ENSIPUG00000001247	shq1	91	52.102	ENSSSCG00000011518	SHQ1	75	59.361	Sus_scrofa
ENSIPUG00000001247	shq1	71	60.095	ENSTGUG00000009933	SHQ1	76	59.050	Taeniopygia_guttata
ENSIPUG00000001247	shq1	70	63.017	ENSTRUG00000009446	shq1	74	62.903	Takifugu_rubripes
ENSIPUG00000001247	shq1	74	62.238	ENSTNIG00000007354	shq1	96	61.751	Tetraodon_nigroviridis
ENSIPUG00000001247	shq1	70	74.468	ENSTBEG00000011295	SHQ1	57	74.468	Tupaia_belangeri
ENSIPUG00000001247	shq1	90	49.564	ENSTTRG00000005320	SHQ1	75	58.447	Tursiops_truncatus
ENSIPUG00000001247	shq1	77	59.050	ENSUMAG00000024031	SHQ1	76	59.184	Ursus_maritimus
ENSIPUG00000001247	shq1	68	44.743	ENSVPAG00000004880	SHQ1	73	49.231	Vicugna_pacos
ENSIPUG00000001247	shq1	68	58.750	ENSVVUG00000013906	SHQ1	75	58.314	Vulpes_vulpes
ENSIPUG00000001247	shq1	75	56.492	ENSXETG00000032215	shq1	72	56.492	Xenopus_tropicalis