EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001249 (Gene tree)
Gene ID: 108258664
Gene Symbol: ern2
Alias: si:ch211-14k19.11
Full Name: endoplasmic reticulum to nucleus signaling 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 11968 bases
Position: chr26:393489-405456
Accession: 108258664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001752	Ribonuc_2-5A	PF06479.12	5.1e-40	1	1
ENSIPUP00000001737	Ribonuc_2-5A	PF06479.12	5.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001822	-	3445	XM_017457459	ENSIPUP00000001737	929 (aa)	XP_017312948	-
ENSIPUT00000001838	-	3367	XM_017457458	ENSIPUP00000001752	903 (aa)	XP_017312947	-

Gene Model

Click here to download ENSIPUG00000001249's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04140	Autophagy - animal	KEGG
ipu04141	Protein processing in endoplasmic reticulum	KEGG
ipu04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001249	ern2	95	56.376	ENSIPUG00000011083	ern1	85	56.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001249	ern2	95	67.519	ENSAPOG00000002325	ern2	99	67.463	Acanthochromis_polyacanthus
ENSIPUG00000001249	ern2	96	67.116	ENSACIG00000015500	ern2	93	67.076	Amphilophus_citrinellus
ENSIPUG00000001249	ern2	95	68.080	ENSAOCG00000001933	ern2	91	67.857	Amphiprion_ocellaris
ENSIPUG00000001249	ern2	95	67.969	ENSAPEG00000000821	ern2	91	67.969	Amphiprion_percula
ENSIPUG00000001249	ern2	96	67.519	ENSATEG00000008597	ern2	92	67.297	Anabas_testudineus
ENSIPUG00000001249	ern2	95	67.483	ENSACLG00000000966	ern2	91	67.519	Astatotilapia_calliptera
ENSIPUG00000001249	ern2	87	89.383	ENSAMXG00000018368	ern2	88	89.383	Astyanax_mexicanus
ENSIPUG00000001249	ern2	95	65.227	ENSCSEG00000020936	ern2	91	64.895	Cynoglossus_semilaevis
ENSIPUG00000001249	ern2	95	66.227	ENSCVAG00000015538	ern2	92	66.890	Cyprinodon_variegatus
ENSIPUG00000001249	ern2	95	80.600	ENSDARG00000058475	ern2	88	87.990	Danio_rerio
ENSIPUG00000001249	ern2	84	76.633	ENSELUG00000009350	ern2	85	76.633	Esox_lucius
ENSIPUG00000001249	ern2	95	67.746	ENSFHEG00000002578	ern2	91	67.517	Fundulus_heteroclitus
ENSIPUG00000001249	ern2	77	78.426	ENSGMOG00000006029	ern2	76	78.426	Gadus_morhua
ENSIPUG00000001249	ern2	95	66.104	ENSGACG00000016726	ern2	89	65.011	Gasterosteus_aculeatus
ENSIPUG00000001249	ern2	95	67.372	ENSHBUG00000019242	ern2	99	66.895	Haplochromis_burtoni
ENSIPUG00000001249	ern2	79	75.328	ENSHCOG00000020503	ern2	78	75.328	Hippocampus_comes
ENSIPUG00000001249	ern2	95	67.746	ENSKMAG00000007537	ern2	91	66.778	Kryptolebias_marmoratus
ENSIPUG00000001249	ern2	96	65.673	ENSLBEG00000005440	ern2	92	66.556	Labrus_bergylta
ENSIPUG00000001249	ern2	96	67.032	ENSMAMG00000008619	ern2	93	66.995	Mastacembelus_armatus
ENSIPUG00000001249	ern2	95	67.483	ENSMZEG00005011884	ern2	91	67.519	Maylandia_zebra
ENSIPUG00000001249	ern2	95	65.957	ENSMMOG00000003643	ern2	91	65.957	Mola_mola
ENSIPUG00000001249	ern2	95	65.965	ENSMALG00000002568	ern2	92	64.847	Monopterus_albus
ENSIPUG00000001249	ern2	95	66.966	ENSONIG00000003276	ern2	92	67.865	Oreochromis_niloticus
ENSIPUG00000001249	ern2	95	66.667	ENSORLG00000008924	ERN2	99	65.899	Oryzias_latipes
ENSIPUG00000001249	ern2	95	66.442	ENSORLG00020012672	ern2	92	66.442	Oryzias_latipes_hni
ENSIPUG00000001249	ern2	95	66.554	ENSORLG00015011995	ern2	92	66.442	Oryzias_latipes_hsok
ENSIPUG00000001249	ern2	95	66.667	ENSOMEG00000022267	ern2	92	66.149	Oryzias_melastigma
ENSIPUG00000001249	ern2	95	70.715	ENSPKIG00000013181	ern2	89	70.375	Paramormyrops_kingsleyae
ENSIPUG00000001249	ern2	77	78.660	ENSPMGG00000016482	ern2	76	78.660	Periophthalmus_magnuspinnatus
ENSIPUG00000001249	ern2	93	66.171	ENSPFOG00000006600	-	99	65.943	Poecilia_formosa
ENSIPUG00000001249	ern2	54	82.161	ENSPLAG00000018226	-	97	78.118	Poecilia_latipinna
ENSIPUG00000001249	ern2	68	64.363	ENSPMEG00000004696	-	99	64.055	Poecilia_mexicana
ENSIPUG00000001249	ern2	95	67.261	ENSPNYG00000014961	ern2	91	67.297	Pundamilia_nyererei
ENSIPUG00000001249	ern2	95	84.125	ENSPNAG00000014531	ern2	92	84.125	Pygocentrus_nattereri
ENSIPUG00000001249	ern2	93	66.628	ENSSMAG00000021268	ern2	99	65.919	Scophthalmus_maximus
ENSIPUG00000001249	ern2	95	67.297	ENSSDUG00000016726	ern2	91	66.703	Seriola_dumerili
ENSIPUG00000001249	ern2	95	67.186	ENSSLDG00000022830	ern2	91	67.408	Seriola_lalandi_dorsalis
ENSIPUG00000001249	ern2	82	73.827	ENSSPAG00000013487	ern2	84	73.827	Stegastes_partitus
ENSIPUG00000001249	ern2	95	64.356	ENSTRUG00000011288	ern2	92	64.356	Takifugu_rubripes
ENSIPUG00000001249	ern2	98	57.993	ENSXETG00000010337	ern2	92	57.993	Xenopus_tropicalis
ENSIPUG00000001249	ern2	74	81.156	ENSXCOG00000009393	ern2	89	81.156	Xiphophorus_couchianus
ENSIPUG00000001249	ern2	95	66.481	ENSXMAG00000006362	-	91	66.370	Xiphophorus_maculatus