EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001273 (Gene tree)
Gene ID: 108264995
Gene Symbol: mrpl55
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5012 bases
Position: chr5:21427988-21432999
Accession: 108264995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001783	Mitoc_L55	PF09776.9	9.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001869	-	570	XM_017467041	ENSIPUP00000001783	132 (aa)	XP_017322530	A0A2D0QYE5

Gene Model

Click here to download ENSIPUG00000001273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001273	mrpl55	78	61.165	ENSAPOG00000002881	zgc:171480	71	61.165	Acanthochromis_polyacanthus
ENSIPUG00000001273	mrpl55	99	50.758	ENSACIG00000001646	zgc:171480	96	50.758	Amphilophus_citrinellus
ENSIPUG00000001273	mrpl55	80	60.377	ENSAOCG00000016155	zgc:171480	73	60.377	Amphiprion_ocellaris
ENSIPUG00000001273	mrpl55	80	60.377	ENSAPEG00000022327	zgc:171480	73	60.377	Amphiprion_percula
ENSIPUG00000001273	mrpl55	80	57.547	ENSATEG00000005625	zgc:171480	71	57.547	Anabas_testudineus
ENSIPUG00000001273	mrpl55	76	63.000	ENSACAG00000006897	-	79	63.000	Anolis_carolinensis
ENSIPUG00000001273	mrpl55	76	63.000	ENSACLG00000005172	zgc:171480	72	63.000	Astatotilapia_calliptera
ENSIPUG00000001273	mrpl55	100	71.212	ENSAMXG00000043839	zgc:171480	100	71.212	Astyanax_mexicanus
ENSIPUG00000001273	mrpl55	88	57.759	ENSCPBG00000001771	-	92	57.759	Chrysemys_picta_bellii
ENSIPUG00000001273	mrpl55	89	54.701	ENSCSEG00000019533	zgc:171480	82	55.556	Cynoglossus_semilaevis
ENSIPUG00000001273	mrpl55	99	64.122	ENSDARG00000043402	zgc:171480	98	64.885	Danio_rerio
ENSIPUG00000001273	mrpl55	99	65.649	ENSELUG00000007716	zgc:171480	100	65.649	Esox_lucius
ENSIPUG00000001273	mrpl55	71	53.191	ENSFALG00000001083	-	96	53.191	Ficedula_albicollis
ENSIPUG00000001273	mrpl55	78	54.369	ENSFHEG00000000203	zgc:171480	73	54.902	Fundulus_heteroclitus
ENSIPUG00000001273	mrpl55	76	65.000	ENSGMOG00000019009	zgc:171480	97	65.000	Gadus_morhua
ENSIPUG00000001273	mrpl55	92	47.934	ENSGALG00000038820	-	99	47.934	Gallus_gallus
ENSIPUG00000001273	mrpl55	98	48.485	ENSGAFG00000004832	-	91	48.485	Gambusia_affinis
ENSIPUG00000001273	mrpl55	70	66.304	ENSGACG00000002136	zgc:171480	99	68.478	Gasterosteus_aculeatus
ENSIPUG00000001273	mrpl55	87	55.652	ENSGAGG00000001806	-	92	55.652	Gopherus_agassizii
ENSIPUG00000001273	mrpl55	76	63.000	ENSHBUG00000007895	zgc:171480	72	63.000	Haplochromis_burtoni
ENSIPUG00000001273	mrpl55	80	59.048	ENSHCOG00000003526	zgc:171480	57	59.048	Hippocampus_comes
ENSIPUG00000001273	mrpl55	78	54.369	ENSKMAG00000002011	zgc:171480	80	54.369	Kryptolebias_marmoratus
ENSIPUG00000001273	mrpl55	80	61.321	ENSLBEG00000016107	-	83	61.321	Labrus_bergylta
ENSIPUG00000001273	mrpl55	80	61.321	ENSLBEG00000010915	zgc:171480	83	61.321	Labrus_bergylta
ENSIPUG00000001273	mrpl55	89	61.864	ENSLACG00000016281	zgc:171480	89	61.864	Latimeria_chalumnae
ENSIPUG00000001273	mrpl55	80	58.491	ENSMAMG00000022250	zgc:171480	71	58.491	Mastacembelus_armatus
ENSIPUG00000001273	mrpl55	76	63.000	ENSMZEG00005015585	zgc:171480	72	63.000	Maylandia_zebra
ENSIPUG00000001273	mrpl55	92	47.934	ENSMGAG00000002612	-	99	47.934	Meleagris_gallopavo
ENSIPUG00000001273	mrpl55	87	44.348	ENSMMOG00000008740	-	87	44.348	Mola_mola
ENSIPUG00000001273	mrpl55	86	52.632	ENSMALG00000019823	zgc:171480	83	55.660	Monopterus_albus
ENSIPUG00000001273	mrpl55	76	62.000	ENSNBRG00000019447	zgc:171480	72	62.000	Neolamprologus_brichardi
ENSIPUG00000001273	mrpl55	76	62.000	ENSONIG00000007645	zgc:171480	73	62.000	Oreochromis_niloticus
ENSIPUG00000001273	mrpl55	76	59.000	ENSORLG00020006963	zgc:171480	74	59.000	Oryzias_latipes_hni
ENSIPUG00000001273	mrpl55	76	59.000	ENSORLG00015003266	zgc:171480	74	59.000	Oryzias_latipes_hsok
ENSIPUG00000001273	mrpl55	81	53.913	ENSOMEG00000008184	zgc:171480	83	53.913	Oryzias_melastigma
ENSIPUG00000001273	mrpl55	99	60.305	ENSPKIG00000006753	zgc:171480	100	60.305	Paramormyrops_kingsleyae
ENSIPUG00000001273	mrpl55	87	54.783	ENSPSIG00000010893	-	91	54.783	Pelodiscus_sinensis
ENSIPUG00000001273	mrpl55	92	53.719	ENSPMGG00000012657	-	89	53.719	Periophthalmus_magnuspinnatus
ENSIPUG00000001273	mrpl55	70	51.613	ENSPMAG00000000867	zgc:171480	93	47.706	Petromyzon_marinus
ENSIPUG00000001273	mrpl55	92	53.279	ENSPCIG00000021848	-	91	54.783	Phascolarctos_cinereus
ENSIPUG00000001273	mrpl55	96	48.872	ENSPFOG00000012703	zgc:171480	94	48.872	Poecilia_formosa
ENSIPUG00000001273	mrpl55	96	49.624	ENSPREG00000020328	zgc:171480	94	49.624	Poecilia_reticulata
ENSIPUG00000001273	mrpl55	100	75.758	ENSPNAG00000017309	zgc:171480	100	75.758	Pygocentrus_nattereri
ENSIPUG00000001273	mrpl55	99	60.305	ENSSFOG00015015668	mrpl55	100	60.305	Scleropages_formosus
ENSIPUG00000001273	mrpl55	78	59.223	ENSSMAG00000005429	zgc:171480	73	59.223	Scophthalmus_maximus
ENSIPUG00000001273	mrpl55	86	57.018	ENSSDUG00000022556	zgc:171480	76	57.018	Seriola_dumerili
ENSIPUG00000001273	mrpl55	86	57.018	ENSSLDG00000019598	zgc:171480	76	57.018	Seriola_lalandi_dorsalis
ENSIPUG00000001273	mrpl55	82	56.481	ENSSPUG00000000735	-	86	56.481	Sphenodon_punctatus
ENSIPUG00000001273	mrpl55	80	59.434	ENSSPAG00000011598	zgc:171480	74	59.434	Stegastes_partitus
ENSIPUG00000001273	mrpl55	78	58.252	ENSTRUG00000003082	zgc:171480	72	58.252	Takifugu_rubripes
ENSIPUG00000001273	mrpl55	70	58.696	ENSXCOG00000005887	zgc:171480	75	58.696	Xiphophorus_couchianus
ENSIPUG00000001273	mrpl55	90	50.413	ENSXMAG00000007937	zgc:171480	97	47.445	Xiphophorus_maculatus