EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001310 (Gene tree)
Gene ID: 108271654
Gene Symbol: Ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18410 bases
Position: chr1:12608958-12627367
Accession: 108271654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000001848	cwf18	PF08315.12	1.2e-37	1	1
ENSIPUP00000001866	cwf18	PF08315.12	3.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000001960	-	498	-	ENSIPUP00000001866	165 (aa)	-	-
ENSIPUT00000001939	-	5383	XM_017479372	ENSIPUP00000001848	164 (aa)	XP_017334861	W5ULX3

Gene Model

Click here to download ENSIPUG00000001310's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001310	Ccdc12	98	66.667	ENSG00000160799	CCDC12	96	66.667	Homo_sapiens
ENSIPUG00000001310	Ccdc12	99	77.160	ENSAPOG00000014426	ccdc12	60	77.160	Acanthochromis_polyacanthus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSAMEG00000012658	CCDC12	96	67.284	Ailuropoda_melanoleuca
ENSIPUG00000001310	Ccdc12	68	85.714	ENSACIG00000015192	ccdc12	80	85.714	Amphilophus_citrinellus
ENSIPUG00000001310	Ccdc12	71	85.345	ENSACIG00000022676	-	83	85.345	Amphilophus_citrinellus
ENSIPUG00000001310	Ccdc12	99	77.914	ENSAOCG00000024127	ccdc12	98	77.914	Amphiprion_ocellaris
ENSIPUG00000001310	Ccdc12	99	77.778	ENSAPEG00000009155	ccdc12	85	77.778	Amphiprion_percula
ENSIPUG00000001310	Ccdc12	82	82.090	ENSATEG00000004807	ccdc12	100	82.090	Anabas_testudineus
ENSIPUG00000001310	Ccdc12	80	71.429	ENSAPLG00000005482	CCDC12	97	71.429	Anas_platyrhynchos
ENSIPUG00000001310	Ccdc12	96	71.605	ENSACAG00000004727	CCDC12	83	71.605	Anolis_carolinensis
ENSIPUG00000001310	Ccdc12	79	73.077	ENSANAG00000024483	CCDC12	97	73.077	Aotus_nancymaae
ENSIPUG00000001310	Ccdc12	95	68.387	ENSACLG00000012742	-	96	68.387	Astatotilapia_calliptera
ENSIPUG00000001310	Ccdc12	99	77.160	ENSACLG00000005356	ccdc12	99	77.160	Astatotilapia_calliptera
ENSIPUG00000001310	Ccdc12	99	84.568	ENSAMXG00000016319	ccdc12	99	84.568	Astyanax_mexicanus
ENSIPUG00000001310	Ccdc12	88	69.178	ENSBTAG00000011311	CCDC12	96	65.854	Bos_taurus
ENSIPUG00000001310	Ccdc12	87	37.162	WBGene00022092	Y69A2AR.21	85	37.013	Caenorhabditis_elegans
ENSIPUG00000001310	Ccdc12	98	67.284	ENSCJAG00000002280	CCDC12	96	67.284	Callithrix_jacchus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSCAFG00000013588	CCDC12	96	67.284	Canis_familiaris
ENSIPUG00000001310	Ccdc12	98	67.284	ENSCAFG00020014024	CCDC12	89	67.284	Canis_lupus_dingo
ENSIPUG00000001310	Ccdc12	88	69.178	ENSCHIG00000014512	CCDC12	96	65.854	Capra_hircus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSTSYG00000032837	CCDC12	96	67.284	Carlito_syrichta
ENSIPUG00000001310	Ccdc12	98	67.284	ENSCPOG00000032515	CCDC12	96	67.284	Cavia_porcellus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSCCAG00000020126	CCDC12	89	67.284	Cebus_capucinus
ENSIPUG00000001310	Ccdc12	98	56.790	ENSCATG00000033681	CCDC12	89	56.790	Cercocebus_atys
ENSIPUG00000001310	Ccdc12	98	67.901	ENSCLAG00000016013	CCDC12	96	67.901	Chinchilla_lanigera
ENSIPUG00000001310	Ccdc12	98	66.667	ENSCSAG00000016154	CCDC12	89	66.667	Chlorocebus_sabaeus
ENSIPUG00000001310	Ccdc12	98	67.702	ENSCPBG00000015804	CCDC12	77	67.702	Chrysemys_picta_bellii
ENSIPUG00000001310	Ccdc12	95	47.771	ENSCING00000005261	-	99	40.828	Ciona_intestinalis
ENSIPUG00000001310	Ccdc12	98	66.667	ENSCANG00000020857	CCDC12	89	66.667	Colobus_angolensis_palliatus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSCGRG00001000459	Ccdc12	96	67.901	Cricetulus_griseus_chok1gshd
ENSIPUG00000001310	Ccdc12	98	67.901	ENSCGRG00000012816	Ccdc12	96	67.901	Cricetulus_griseus_crigri
ENSIPUG00000001310	Ccdc12	99	74.691	ENSCSEG00000004543	ccdc12	99	74.691	Cynoglossus_semilaevis
ENSIPUG00000001310	Ccdc12	82	79.851	ENSCVAG00000011342	ccdc12	100	79.851	Cyprinodon_variegatus
ENSIPUG00000001310	Ccdc12	100	82.317	ENSDARG00000023003	ccdc12	100	82.317	Danio_rerio
ENSIPUG00000001310	Ccdc12	88	71.724	ENSDORG00000016567	-	96	68.323	Dipodomys_ordii
ENSIPUG00000001310	Ccdc12	98	60.870	ENSDORG00000024399	-	96	60.870	Dipodomys_ordii
ENSIPUG00000001310	Ccdc12	99	41.212	FBgn0039732	CG15525	94	41.212	Drosophila_melanogaster
ENSIPUG00000001310	Ccdc12	66	62.385	ENSETEG00000000030	CCDC12	95	62.385	Echinops_telfairi
ENSIPUG00000001310	Ccdc12	97	55.346	ENSEBUG00000005674	ccdc12	98	57.500	Eptatretus_burgeri
ENSIPUG00000001310	Ccdc12	98	67.901	ENSEASG00005008148	-	66	67.901	Equus_asinus_asinus
ENSIPUG00000001310	Ccdc12	98	62.346	ENSECAG00000008649	CCDC12	96	62.346	Equus_caballus
ENSIPUG00000001310	Ccdc12	99	78.049	ENSELUG00000024105	ccdc12	99	79.394	Esox_lucius
ENSIPUG00000001310	Ccdc12	98	67.901	ENSFCAG00000015474	CCDC12	96	67.901	Felis_catus
ENSIPUG00000001310	Ccdc12	75	72.000	ENSFALG00000001895	CCDC12	77	72.000	Ficedula_albicollis
ENSIPUG00000001310	Ccdc12	98	68.519	ENSFDAG00000002549	CCDC12	97	68.519	Fukomys_damarensis
ENSIPUG00000001310	Ccdc12	99	76.543	ENSFHEG00000016247	ccdc12	92	76.543	Fundulus_heteroclitus
ENSIPUG00000001310	Ccdc12	99	67.284	ENSGMOG00000016901	ccdc12	99	67.284	Gadus_morhua
ENSIPUG00000001310	Ccdc12	99	75.926	ENSGAFG00000006762	ccdc12	98	77.692	Gambusia_affinis
ENSIPUG00000001310	Ccdc12	97	79.375	ENSGACG00000008629	ccdc12	98	79.375	Gasterosteus_aculeatus
ENSIPUG00000001310	Ccdc12	98	68.323	ENSGAGG00000019688	CCDC12	95	68.323	Gopherus_agassizii
ENSIPUG00000001310	Ccdc12	98	66.667	ENSGGOG00000009012	CCDC12	89	66.667	Gorilla_gorilla
ENSIPUG00000001310	Ccdc12	99	77.160	ENSHBUG00000016447	ccdc12	99	77.160	Haplochromis_burtoni
ENSIPUG00000001310	Ccdc12	98	67.901	ENSHGLG00000014058	CCDC12	96	67.901	Heterocephalus_glaber_female
ENSIPUG00000001310	Ccdc12	98	67.901	ENSHGLG00100005918	CCDC12	96	67.901	Heterocephalus_glaber_male
ENSIPUG00000001310	Ccdc12	97	77.500	ENSHCOG00000015164	ccdc12	98	77.500	Hippocampus_comes
ENSIPUG00000001310	Ccdc12	98	69.136	ENSSTOG00000003085	CCDC12	96	69.136	Ictidomys_tridecemlineatus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSJJAG00000014918	Ccdc12	96	67.901	Jaculus_jaculus
ENSIPUG00000001310	Ccdc12	99	72.561	ENSKMAG00000013891	ccdc12	99	72.561	Kryptolebias_marmoratus
ENSIPUG00000001310	Ccdc12	100	78.659	ENSLBEG00000024714	ccdc12	87	78.659	Labrus_bergylta
ENSIPUG00000001310	Ccdc12	97	76.730	ENSLOCG00000005683	ccdc12	89	77.358	Lepisosteus_oculatus
ENSIPUG00000001310	Ccdc12	68	77.679	ENSLAFG00000022573	-	98	77.679	Loxodonta_africana
ENSIPUG00000001310	Ccdc12	98	62.733	ENSLAFG00000027745	-	98	62.733	Loxodonta_africana
ENSIPUG00000001310	Ccdc12	98	66.667	ENSMFAG00000002976	CCDC12	89	66.667	Macaca_fascicularis
ENSIPUG00000001310	Ccdc12	98	66.667	ENSMMUG00000019810	CCDC12	89	66.667	Macaca_mulatta
ENSIPUG00000001310	Ccdc12	98	66.667	ENSMNEG00000035785	CCDC12	89	66.667	Macaca_nemestrina
ENSIPUG00000001310	Ccdc12	98	66.667	ENSMLEG00000038060	CCDC12	89	66.667	Mandrillus_leucophaeus
ENSIPUG00000001310	Ccdc12	99	80.247	ENSMAMG00000012165	ccdc12	99	80.247	Mastacembelus_armatus
ENSIPUG00000001310	Ccdc12	99	77.160	ENSMZEG00005014728	ccdc12	99	77.160	Maylandia_zebra
ENSIPUG00000001310	Ccdc12	95	68.387	ENSMZEG00005019013	-	96	68.387	Maylandia_zebra
ENSIPUG00000001310	Ccdc12	85	68.794	ENSMGAG00000002815	CCDC12	90	65.625	Meleagris_gallopavo
ENSIPUG00000001310	Ccdc12	98	67.901	ENSMAUG00000008879	Ccdc12	96	67.901	Mesocricetus_auratus
ENSIPUG00000001310	Ccdc12	98	66.871	ENSMICG00000032886	CCDC12	96	67.485	Microcebus_murinus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSMOCG00000004483	Ccdc12	96	67.901	Microtus_ochrogaster
ENSIPUG00000001310	Ccdc12	68	81.982	ENSMMOG00000001860	ccdc12	77	81.982	Mola_mola
ENSIPUG00000001310	Ccdc12	97	58.125	ENSMODG00000022615	-	96	58.125	Monodelphis_domestica
ENSIPUG00000001310	Ccdc12	97	58.750	ENSMODG00000025021	-	96	58.750	Monodelphis_domestica
ENSIPUG00000001310	Ccdc12	98	66.258	ENSMODG00000013967	-	96	66.871	Monodelphis_domestica
ENSIPUG00000001310	Ccdc12	97	80.503	ENSMALG00000011850	ccdc12	98	80.503	Monopterus_albus
ENSIPUG00000001310	Ccdc12	98	67.901	MGP_CAROLIEiJ_G0032737	-	71	93.103	Mus_caroli
ENSIPUG00000001310	Ccdc12	98	67.901	ENSMUSG00000019659	Ccdc12	96	67.901	Mus_musculus
ENSIPUG00000001310	Ccdc12	98	67.901	MGP_PahariEiJ_G0015604	Ccdc12	96	67.901	Mus_pahari
ENSIPUG00000001310	Ccdc12	98	67.901	MGP_SPRETEiJ_G0033885	Ccdc12	96	67.901	Mus_spretus
ENSIPUG00000001310	Ccdc12	98	63.580	ENSMLUG00000009547	CCDC12	85	75.652	Myotis_lucifugus
ENSIPUG00000001310	Ccdc12	98	68.519	ENSNGAG00000004149	Ccdc12	96	68.519	Nannospalax_galili
ENSIPUG00000001310	Ccdc12	99	72.393	ENSNBRG00000015275	ccdc12	99	72.393	Neolamprologus_brichardi
ENSIPUG00000001310	Ccdc12	98	67.284	ENSNLEG00000006219	CCDC12	96	67.284	Nomascus_leucogenys
ENSIPUG00000001310	Ccdc12	93	63.636	ENSOPRG00000005086	CCDC12	92	64.286	Ochotona_princeps
ENSIPUG00000001310	Ccdc12	98	67.284	ENSODEG00000012202	CCDC12	96	67.284	Octodon_degus
ENSIPUG00000001310	Ccdc12	99	77.160	ENSONIG00000003061	ccdc12	99	77.160	Oreochromis_niloticus
ENSIPUG00000001310	Ccdc12	75	75.610	ENSOANG00000004263	-	92	75.610	Ornithorhynchus_anatinus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSOCUG00000012431	CCDC12	82	67.284	Oryctolagus_cuniculus
ENSIPUG00000001310	Ccdc12	99	71.951	ENSORLG00000008126	ccdc12	99	71.951	Oryzias_latipes
ENSIPUG00000001310	Ccdc12	99	74.691	ENSORLG00020013927	ccdc12	99	74.691	Oryzias_latipes_hni
ENSIPUG00000001310	Ccdc12	99	74.691	ENSORLG00015020115	ccdc12	99	74.691	Oryzias_latipes_hsok
ENSIPUG00000001310	Ccdc12	99	77.160	ENSOMEG00000014082	ccdc12	99	77.160	Oryzias_melastigma
ENSIPUG00000001310	Ccdc12	99	77.160	ENSOMEG00000022304	ccdc12	99	77.160	Oryzias_melastigma
ENSIPUG00000001310	Ccdc12	68	76.786	ENSOGAG00000016807	CCDC12	100	76.786	Otolemur_garnettii
ENSIPUG00000001310	Ccdc12	70	76.316	ENSOARG00000006426	CCDC12	96	71.212	Ovis_aries
ENSIPUG00000001310	Ccdc12	98	66.049	ENSPPAG00000028782	CCDC12	89	66.049	Pan_paniscus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSPPRG00000013547	CCDC12	96	67.901	Panthera_pardus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSPTIG00000014875	CCDC12	92	67.901	Panthera_tigris_altaica
ENSIPUG00000001310	Ccdc12	98	66.667	ENSPTRG00000014862	CCDC12	89	66.667	Pan_troglodytes
ENSIPUG00000001310	Ccdc12	98	66.667	ENSPANG00000017485	CCDC12	91	66.667	Papio_anubis
ENSIPUG00000001310	Ccdc12	97	76.250	ENSPKIG00000019130	ccdc12	98	78.750	Paramormyrops_kingsleyae
ENSIPUG00000001310	Ccdc12	68	83.784	ENSPSIG00000010867	CCDC12	100	83.784	Pelodiscus_sinensis
ENSIPUG00000001310	Ccdc12	99	76.543	ENSPMGG00000012211	ccdc12	99	76.543	Periophthalmus_magnuspinnatus
ENSIPUG00000001310	Ccdc12	98	67.901	ENSPEMG00000022196	-	96	67.901	Peromyscus_maniculatus_bairdii
ENSIPUG00000001310	Ccdc12	98	52.147	ENSPEMG00000001376	-	97	52.147	Peromyscus_maniculatus_bairdii
ENSIPUG00000001310	Ccdc12	96	68.153	ENSPMAG00000000005	ccdc12	92	68.153	Petromyzon_marinus
ENSIPUG00000001310	Ccdc12	98	68.323	ENSPCIG00000025941	CCDC12	96	68.323	Phascolarctos_cinereus
ENSIPUG00000001310	Ccdc12	99	76.543	ENSPFOG00000000343	ccdc12	99	76.543	Poecilia_formosa
ENSIPUG00000001310	Ccdc12	99	76.543	ENSPLAG00000019010	ccdc12	99	76.543	Poecilia_latipinna
ENSIPUG00000001310	Ccdc12	97	77.987	ENSPMEG00000022371	ccdc12	79	77.987	Poecilia_mexicana
ENSIPUG00000001310	Ccdc12	97	78.616	ENSPREG00000020932	ccdc12	79	78.616	Poecilia_reticulata
ENSIPUG00000001310	Ccdc12	98	67.284	ENSPPYG00000013924	CCDC12	79	67.284	Pongo_abelii
ENSIPUG00000001310	Ccdc12	98	67.901	ENSPCAG00000005800	CCDC12	96	67.901	Procavia_capensis
ENSIPUG00000001310	Ccdc12	98	68.098	ENSPCOG00000018682	CCDC12	89	68.712	Propithecus_coquereli
ENSIPUG00000001310	Ccdc12	98	67.284	ENSPVAG00000004204	CCDC12	96	67.284	Pteropus_vampyrus
ENSIPUG00000001310	Ccdc12	99	77.160	ENSPNYG00000016295	ccdc12	99	77.160	Pundamilia_nyererei
ENSIPUG00000001310	Ccdc12	99	63.804	ENSPNAG00000028558	ccdc12	90	93.694	Pygocentrus_nattereri
ENSIPUG00000001310	Ccdc12	98	67.901	ENSRNOG00000020946	Ccdc12	96	67.901	Rattus_norvegicus
ENSIPUG00000001310	Ccdc12	98	66.667	ENSRBIG00000039910	CCDC12	89	66.667	Rhinopithecus_bieti
ENSIPUG00000001310	Ccdc12	98	66.667	ENSRROG00000039721	CCDC12	96	66.667	Rhinopithecus_roxellana
ENSIPUG00000001310	Ccdc12	98	67.284	ENSSBOG00000035443	CCDC12	89	67.284	Saimiri_boliviensis_boliviensis
ENSIPUG00000001310	Ccdc12	98	66.250	ENSSHAG00000003265	-	96	66.250	Sarcophilus_harrisii
ENSIPUG00000001310	Ccdc12	99	73.620	ENSSFOG00015001307	ccdc12	99	73.620	Scleropages_formosus
ENSIPUG00000001310	Ccdc12	90	80.272	ENSSMAG00000019856	ccdc12	98	80.000	Scophthalmus_maximus
ENSIPUG00000001310	Ccdc12	100	79.878	ENSSDUG00000006549	ccdc12	100	79.878	Seriola_dumerili
ENSIPUG00000001310	Ccdc12	97	80.503	ENSSLDG00000015956	ccdc12	98	80.503	Seriola_lalandi_dorsalis
ENSIPUG00000001310	Ccdc12	90	51.020	ENSSPUG00000013054	CCDC12	91	51.020	Sphenodon_punctatus
ENSIPUG00000001310	Ccdc12	99	76.543	ENSSPAG00000007010	ccdc12	99	76.543	Stegastes_partitus
ENSIPUG00000001310	Ccdc12	98	67.081	ENSSSCG00000011329	-	96	67.081	Sus_scrofa
ENSIPUG00000001310	Ccdc12	93	42.857	ENSSSCG00000007882	-	95	42.857	Sus_scrofa
ENSIPUG00000001310	Ccdc12	66	61.818	ENSTGUG00000000186	CCDC12	86	61.818	Taeniopygia_guttata
ENSIPUG00000001310	Ccdc12	97	70.440	ENSTRUG00000014023	ccdc12	83	70.440	Takifugu_rubripes
ENSIPUG00000001310	Ccdc12	97	73.585	ENSTNIG00000018407	ccdc12	96	73.585	Tetraodon_nigroviridis
ENSIPUG00000001310	Ccdc12	98	44.172	ENSTBEG00000000048	CCDC12	96	44.172	Tupaia_belangeri
ENSIPUG00000001310	Ccdc12	98	62.963	ENSTTRG00000015854	CCDC12	96	62.963	Tursiops_truncatus
ENSIPUG00000001310	Ccdc12	98	61.111	ENSUAMG00000025548	CCDC12	93	68.382	Ursus_americanus
ENSIPUG00000001310	Ccdc12	98	67.284	ENSUMAG00000004346	CCDC12	96	67.284	Ursus_maritimus
ENSIPUG00000001310	Ccdc12	66	54.128	ENSVPAG00000000070	-	95	54.128	Vicugna_pacos
ENSIPUG00000001310	Ccdc12	98	67.284	ENSVVUG00000004582	CCDC12	96	67.284	Vulpes_vulpes
ENSIPUG00000001310	Ccdc12	79	75.969	ENSXETG00000013123	ccdc12	95	75.969	Xenopus_tropicalis
ENSIPUG00000001310	Ccdc12	99	75.926	ENSXCOG00000019741	ccdc12	99	75.926	Xiphophorus_couchianus
ENSIPUG00000001310	Ccdc12	97	77.358	ENSXMAG00000014098	ccdc12	79	77.358	Xiphophorus_maculatus