EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000001402 (Gene tree)
Gene ID
108257074
Gene Symbol
atxn1
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
78612 bases
Position
chr24:12309403-12388014
Accession
108257074
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000001950AXHPF08517.123.3e-4211
ENSIPUP00000001956AXHPF08517.123.3e-4211
ENSIPUP00000001958AXHPF08517.123.3e-4211
ENSIPUP00000001966AXHPF08517.123.3e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000002068-3174XM_017454487ENSIPUP00000001966764 (aa)XP_017309976A0A2D0PX25
ENSIPUT00000002052-2901XM_017454485ENSIPUP00000001950764 (aa)XP_017309974A0A2D0PX25
ENSIPUT00000002060-2650-ENSIPUP00000001958764 (aa)-A0A2D0PX25
ENSIPUT00000002058-2788XM_017454486ENSIPUP00000001956764 (aa)XP_017309975A0A2D0PX25
Gene Model
Click here to download ENSIPUG00000001402's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001402's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000001402atxn19939.653ENSIPUG00000002088atxn1b9940.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000001402atxn110042.694ENSG00000124788ATXN110042.726Homo_sapiens
ENSIPUG00000001402atxn19941.123ENSAPOG00000005003atxn1b9941.924Acanthochromis_polyacanthus
ENSIPUG00000001402atxn110051.429ENSAPOG00000018662atxn1a10052.934Acanthochromis_polyacanthus
ENSIPUG00000001402atxn110043.611ENSAMEG00000004299ATXN110044.042Ailuropoda_melanoleuca
ENSIPUG00000001402atxn18351.412ENSACIG00000016088atxn1a10049.157Amphilophus_citrinellus
ENSIPUG00000001402atxn19939.877ENSACIG00000014661atxn1b9840.321Amphilophus_citrinellus
ENSIPUG00000001402atxn19941.435ENSAOCG00000019715atxn1b9942.290Amphiprion_ocellaris
ENSIPUG00000001402atxn110050.476ENSAOCG00000015796atxn1a10052.216Amphiprion_ocellaris
ENSIPUG00000001402atxn19940.830ENSAPEG00000022436atxn1b9941.638Amphiprion_percula
ENSIPUG00000001402atxn110050.656ENSAPEG00000011313atxn1a10052.455Amphiprion_percula
ENSIPUG00000001402atxn110051.683ENSATEG00000013601atxn1a10052.163Anabas_testudineus
ENSIPUG00000001402atxn19940.093ENSATEG00000002982atxn1b9940.324Anabas_testudineus
ENSIPUG00000001402atxn110045.316ENSACAG00000003919ATXN110045.745Anolis_carolinensis
ENSIPUG00000001402atxn17939.275ENSANAG00000025424-9639.080Aotus_nancymaae
ENSIPUG00000001402atxn19943.939ENSANAG00000025206-9543.939Aotus_nancymaae
ENSIPUG00000001402atxn110050.780ENSACLG00000015429atxn1a10051.501Astatotilapia_calliptera
ENSIPUG00000001402atxn19939.456ENSACLG00000005697atxn1b9940.160Astatotilapia_calliptera
ENSIPUG00000001402atxn110067.647ENSAMXG00000042368atxn1a10070.370Astyanax_mexicanus
ENSIPUG00000001402atxn19937.877ENSAMXG00000017432atxn1b9838.870Astyanax_mexicanus
ENSIPUG00000001402atxn110044.792ENSBTAG00000019675ATXN110044.844Bos_taurus
ENSIPUG00000001402atxn19944.056ENSCJAG00000006563ATXN19444.056Callithrix_jacchus
ENSIPUG00000001402atxn110044.896ENSCAFG00000009934ATXN110045.128Canis_familiaris
ENSIPUG00000001402atxn19944.664ENSCAFG00020012647ATXN19544.896Canis_lupus_dingo
ENSIPUG00000001402atxn110044.651ENSCHIG00000018697ATXN110044.820Capra_hircus
ENSIPUG00000001402atxn16657.029ENSTSYG00000000858ATXN110057.825Carlito_syrichta
ENSIPUG00000001402atxn110044.574ENSCAPG00000013095ATXN110044.691Cavia_aperea
ENSIPUG00000001402atxn110044.876ENSCPOG00000022869ATXN110044.994Cavia_porcellus
ENSIPUG00000001402atxn110044.186ENSCCAG00000018590ATXN110044.535Cebus_capucinus
ENSIPUG00000001402atxn110043.569ENSCATG00000042777ATXN110043.917Cercocebus_atys
ENSIPUG00000001402atxn110044.418ENSCLAG00000002212ATXN110044.771Chinchilla_lanigera
ENSIPUG00000001402atxn110043.554ENSCSAG00000007589ATXN110043.902Chlorocebus_sabaeus
ENSIPUG00000001402atxn110045.476ENSCPBG00000022373ATXN110045.714Chrysemys_picta_bellii
ENSIPUG00000001402atxn110043.874ENSCANG00000033673ATXN110044.224Colobus_angolensis_palliatus
ENSIPUG00000001402atxn110043.902ENSCGRG00001022108Atxn110044.019Cricetulus_griseus_chok1gshd
ENSIPUG00000001402atxn110044.314ENSCGRG00000014084Atxn110044.588Cricetulus_griseus_crigri
ENSIPUG00000001402atxn110048.485ENSCSEG00000017647atxn1a10050.119Cynoglossus_semilaevis
ENSIPUG00000001402atxn19942.241ENSCSEG00000004666atxn1b9943.521Cynoglossus_semilaevis
ENSIPUG00000001402atxn110049.281ENSCVAG00000023240atxn1a10049.400Cyprinodon_variegatus
ENSIPUG00000001402atxn19940.278ENSCVAG00000010945atxn1b9941.088Cyprinodon_variegatus
ENSIPUG00000001402atxn19938.780ENSDARG00000060862atxn1b9938.870Danio_rerio
ENSIPUG00000001402atxn110065.906ENSDARG00000061687atxn1a10066.286Danio_rerio
ENSIPUG00000001402atxn17955.864ENSDNOG00000048471ATXN19156.871Dasypus_novemcinctus
ENSIPUG00000001402atxn110042.757ENSDORG00000005940Atxn110042.924Dipodomys_ordii
ENSIPUG00000001402atxn18557.222ENSETEG00000003815ATXN18758.511Echinops_telfairi
ENSIPUG00000001402atxn110045.423ENSEASG00005011799ATXN110046.009Equus_asinus_asinus
ENSIPUG00000001402atxn110045.423ENSECAG00000009251ATXN110046.009Equus_caballus
ENSIPUG00000001402atxn110043.911ENSEEUG00000007120ATXN110044.509Erinaceus_europaeus
ENSIPUG00000001402atxn19949.195ENSELUG00000003691atxn1a9649.601Esox_lucius
ENSIPUG00000001402atxn19351.316ENSELUG00000001311atxn1b7551.316Esox_lucius
ENSIPUG00000001402atxn110044.743ENSFCAG00000011298ATXN110045.412Felis_catus
ENSIPUG00000001402atxn110045.368ENSFALG00000013400ATXN110045.487Ficedula_albicollis
ENSIPUG00000001402atxn18559.179ENSFDAG00000020905ATXN110056.416Fukomys_damarensis
ENSIPUG00000001402atxn110049.939ENSFHEG00000019419atxn1a10050.788Fundulus_heteroclitus
ENSIPUG00000001402atxn19940.460ENSFHEG00000017226atxn1b9940.762Fundulus_heteroclitus
ENSIPUG00000001402atxn19940.674ENSGMOG00000013508atxn1b9940.674Gadus_morhua
ENSIPUG00000001402atxn110046.228ENSGALG00000012709ATXN110046.707Gallus_gallus
ENSIPUG00000001402atxn110048.655ENSGAFG00000010544atxn1a10049.470Gambusia_affinis
ENSIPUG00000001402atxn19940.788ENSGAFG00000007295atxn1b9941.231Gambusia_affinis
ENSIPUG00000001402atxn19940.821ENSGACG00000008747atxn1b9941.262Gasterosteus_aculeatus
ENSIPUG00000001402atxn110046.258ENSGACG00000003472atxn1a10047.772Gasterosteus_aculeatus
ENSIPUG00000001402atxn110044.929ENSGAGG00000006868ATXN110045.833Gopherus_agassizii
ENSIPUG00000001402atxn110043.203ENSGGOG00000004169ATXN110043.318Gorilla_gorilla
ENSIPUG00000001402atxn19939.456ENSHBUG00000016081atxn1b9940.160Haplochromis_burtoni
ENSIPUG00000001402atxn110051.020ENSHBUG00000002508atxn1a10051.741Haplochromis_burtoni
ENSIPUG00000001402atxn110044.066ENSHGLG00000009360ATXN110044.917Heterocephalus_glaber_female
ENSIPUG00000001402atxn110044.066ENSHGLG00100003038ATXN110044.917Heterocephalus_glaber_male
ENSIPUG00000001402atxn110041.320ENSHCOG00000014835atxn1b9943.033Hippocampus_comes
ENSIPUG00000001402atxn110045.786ENSHCOG00000019032atxn1a10045.912Hippocampus_comes
ENSIPUG00000001402atxn110044.824ENSSTOG00000025423ATXN110045.294Ictidomys_tridecemlineatus
ENSIPUG00000001402atxn110043.882ENSJJAG00000000377Atxn110044.235Jaculus_jaculus
ENSIPUG00000001402atxn19939.884ENSKMAG00000013507atxn1b9940.694Kryptolebias_marmoratus
ENSIPUG00000001402atxn110048.488ENSKMAG00000007216atxn1a10051.023Kryptolebias_marmoratus
ENSIPUG00000001402atxn110041.054ENSLBEG00000024264atxn1b9941.291Labrus_bergylta
ENSIPUG00000001402atxn110051.446ENSLBEG00000024388atxn1a10052.153Labrus_bergylta
ENSIPUG00000001402atxn110047.186ENSLACG00000005371ATXN110046.946Latimeria_chalumnae
ENSIPUG00000001402atxn110054.358ENSLOCG00000002910atxn1a10055.097Lepisosteus_oculatus
ENSIPUG00000001402atxn110044.550ENSLAFG00000015231ATXN110044.693Loxodonta_africana
ENSIPUG00000001402atxn110043.468ENSMFAG00000032779ATXN110043.815Macaca_fascicularis
ENSIPUG00000001402atxn110043.584ENSMMUG00000002940ATXN110043.931Macaca_mulatta
ENSIPUG00000001402atxn110043.569ENSMNEG00000036667ATXN110043.917Macaca_nemestrina
ENSIPUG00000001402atxn18460.000ENSMLEG00000040480ATXN19660.000Mandrillus_leucophaeus
ENSIPUG00000001402atxn19940.367ENSMAMG00000011503atxn1b9941.257Mastacembelus_armatus
ENSIPUG00000001402atxn110052.216ENSMAMG00000014004atxn1a10053.413Mastacembelus_armatus
ENSIPUG00000001402atxn110050.780ENSMZEG00005003602atxn1a10051.501Maylandia_zebra
ENSIPUG00000001402atxn19939.456ENSMZEG00005015064atxn1b9940.160Maylandia_zebra
ENSIPUG00000001402atxn110045.574ENSMGAG00000003028ATXN110045.574Meleagris_gallopavo
ENSIPUG00000001402atxn110043.728ENSMAUG00000011491Atxn110044.431Mesocricetus_auratus
ENSIPUG00000001402atxn110043.458ENSMICG00000011875ATXN110044.121Microcebus_murinus
ENSIPUG00000001402atxn110044.367ENSMOCG00000001527Atxn110044.848Microtus_ochrogaster
ENSIPUG00000001402atxn110050.718ENSMMOG00000018593atxn1a10051.391Mola_mola
ENSIPUG00000001402atxn19941.780ENSMMOG00000002884atxn1b9941.995Mola_mola
ENSIPUG00000001402atxn110045.604ENSMODG00000010827ATXN110045.711Monodelphis_domestica
ENSIPUG00000001402atxn19069.388ENSMALG00000012137atxn1b8769.388Monopterus_albus
ENSIPUG00000001402atxn110050.992ENSMALG00000005209atxn1a10051.821Monopterus_albus
ENSIPUG00000001402atxn110043.845MGP_CAROLIEiJ_G0018479Atxn110043.845Mus_caroli
ENSIPUG00000001402atxn110043.845ENSMUSG00000046876Atxn110043.845Mus_musculus
ENSIPUG00000001402atxn110043.897MGP_PahariEiJ_G0019546Atxn110043.897Mus_pahari
ENSIPUG00000001402atxn110043.662MGP_SPRETEiJ_G0019357Atxn110043.794Mus_spretus
ENSIPUG00000001402atxn110045.123ENSMPUG00000005398ATXN110045.358Mustela_putorius_furo
ENSIPUG00000001402atxn110044.418ENSMLUG00000000896ATXN110044.536Myotis_lucifugus
ENSIPUG00000001402atxn110044.795ENSNGAG00000020481Atxn110045.327Nannospalax_galili
ENSIPUG00000001402atxn19941.184ENSNBRG00000014776atxn1b9842.260Neolamprologus_brichardi
ENSIPUG00000001402atxn110050.719ENSNBRG00000013216atxn1a10051.439Neolamprologus_brichardi
ENSIPUG00000001402atxn110043.337ENSNLEG00000001064ATXN110043.685Nomascus_leucogenys
ENSIPUG00000001402atxn19942.521ENSMEUG00000014680ATXN19642.521Notamacropus_eugenii
ENSIPUG00000001402atxn110042.536ENSOPRG00000004813ATXN110043.160Ochotona_princeps
ENSIPUG00000001402atxn110043.655ENSODEG00000006297ATXN110044.005Octodon_degus
ENSIPUG00000001402atxn19941.809ENSONIG00000003094atxn1b9942.233Oreochromis_niloticus
ENSIPUG00000001402atxn18937.143ENSOANG00000011866ATXN19737.900Ornithorhynchus_anatinus
ENSIPUG00000001402atxn110043.192ENSOCUG00000015360ATXN110043.897Oryctolagus_cuniculus
ENSIPUG00000001402atxn110048.702ENSORLG00000013003atxn1a9947.995Oryzias_latipes
ENSIPUG00000001402atxn19939.885ENSORLG00000008288atxn1b9940.000Oryzias_latipes
ENSIPUG00000001402atxn19940.416ENSORLG00020013514atxn1b9940.462Oryzias_latipes_hni
ENSIPUG00000001402atxn110047.515ENSORLG00020006722atxn1a9947.330Oryzias_latipes_hni
ENSIPUG00000001402atxn110048.459ENSORLG00015014668atxn1a9948.522Oryzias_latipes_hsok
ENSIPUG00000001402atxn19940.184ENSORLG00015019876atxn1b9940.000Oryzias_latipes_hsok
ENSIPUG00000001402atxn19941.292ENSOMEG00000003259atxn1b9940.736Oryzias_melastigma
ENSIPUG00000001402atxn110048.212ENSOMEG00000012883atxn1a9850.312Oryzias_melastigma
ENSIPUG00000001402atxn19944.418ENSOGAG00000028623ATXN110045.241Otolemur_garnettii
ENSIPUG00000001402atxn17748.058ENSOARG00000012141ATXN110044.224Ovis_aries
ENSIPUG00000001402atxn110042.841ENSPPAG00000028993ATXN110042.955Pan_paniscus
ENSIPUG00000001402atxn110048.811ENSPPRG00000004547ATXN19248.889Panthera_pardus
ENSIPUG00000001402atxn110042.989ENSPTRG00000039250ATXN110042.791Pan_troglodytes
ENSIPUG00000001402atxn19943.503ENSPANG00000024249ATXN19943.786Papio_anubis
ENSIPUG00000001402atxn110054.907ENSPKIG00000003054atxn1a10055.143Paramormyrops_kingsleyae
ENSIPUG00000001402atxn110048.918ENSPKIG00000018323atxn1b10049.940Paramormyrops_kingsleyae
ENSIPUG00000001402atxn17641.203ENSPSIG00000007158ATXN19241.654Pelodiscus_sinensis
ENSIPUG00000001402atxn19940.290ENSPMGG00000013610atxn1b9941.325Periophthalmus_magnuspinnatus
ENSIPUG00000001402atxn18551.852ENSPMGG00000022926atxn1a8452.694Periophthalmus_magnuspinnatus
ENSIPUG00000001402atxn110044.070ENSPEMG00000014930Atxn110044.783Peromyscus_maniculatus_bairdii
ENSIPUG00000001402atxn110045.838ENSPCIG00000019413ATXN110045.946Phascolarctos_cinereus
ENSIPUG00000001402atxn110048.417ENSPFOG00000014422atxn1a10049.410Poecilia_formosa
ENSIPUG00000001402atxn19940.878ENSPLAG00000018703atxn1b9941.763Poecilia_latipinna
ENSIPUG00000001402atxn110046.829ENSPLAG00000018978atxn1a10047.259Poecilia_latipinna
ENSIPUG00000001402atxn19939.838ENSPMEG00000023723atxn1b9941.463Poecilia_mexicana
ENSIPUG00000001402atxn110049.057ENSPMEG00000002647atxn1a10049.762Poecilia_mexicana
ENSIPUG00000001402atxn19940.484ENSPREG00000020308atxn1b9941.995Poecilia_reticulata
ENSIPUG00000001402atxn110048.706ENSPREG00000008333atxn1a10049.705Poecilia_reticulata
ENSIPUG00000001402atxn110043.135ENSPPYG00000016254ATXN110043.364Pongo_abelii
ENSIPUG00000001402atxn17462.140ENSPCAG00000008196ATXN16762.140Procavia_capensis
ENSIPUG00000001402atxn110043.888ENSPCOG00000013612ATXN110044.470Propithecus_coquereli
ENSIPUG00000001402atxn19148.718ENSPVAG00000016937ATXN19642.339Pteropus_vampyrus
ENSIPUG00000001402atxn19941.235ENSPNYG00000017095atxn1b9841.943Pundamilia_nyererei
ENSIPUG00000001402atxn110050.780ENSPNYG00000011920atxn1a10051.501Pundamilia_nyererei
ENSIPUG00000001402atxn19939.954ENSPNAG00000001226atxn1b9940.183Pygocentrus_nattereri
ENSIPUG00000001402atxn110073.316ENSPNAG00000010587atxn1a10073.316Pygocentrus_nattereri
ENSIPUG00000001402atxn110044.186ENSRNOG00000016998Atxn110044.014Rattus_norvegicus
ENSIPUG00000001402atxn110043.253ENSRBIG00000028213ATXN110043.599Rhinopithecus_bieti
ENSIPUG00000001402atxn110043.503ENSRROG00000032751ATXN110043.852Rhinopithecus_roxellana
ENSIPUG00000001402atxn17637.672ENSSBOG00000030307-8838.132Saimiri_boliviensis_boliviensis
ENSIPUG00000001402atxn110044.070ENSSBOG00000017381-10044.070Saimiri_boliviensis_boliviensis
ENSIPUG00000001402atxn110049.284ENSSFOG00015000179atxn1b10049.045Scleropages_formosus
ENSIPUG00000001402atxn110053.750ENSSFOG00015005189atxn110055.860Scleropages_formosus
ENSIPUG00000001402atxn19067.347ENSSMAG00000019621atxn1b8567.347Scophthalmus_maximus
ENSIPUG00000001402atxn19950.181ENSSMAG00000007731atxn1a9451.211Scophthalmus_maximus
ENSIPUG00000001402atxn110053.207ENSSDUG00000011376atxn1a10054.306Seriola_dumerili
ENSIPUG00000001402atxn19069.388ENSSDUG00000006990atxn1b9940.046Seriola_dumerili
ENSIPUG00000001402atxn19069.388ENSSLDG00000016306atxn1b9939.145Seriola_lalandi_dorsalis
ENSIPUG00000001402atxn110052.969ENSSLDG00000013505atxn1a10054.067Seriola_lalandi_dorsalis
ENSIPUG00000001402atxn110044.668ENSSPUG00000016650ATXN110044.787Sphenodon_punctatus
ENSIPUG00000001402atxn110050.816ENSSPAG00000019849atxn1a10052.857Stegastes_partitus
ENSIPUG00000001402atxn19942.910ENSSPAG00000003388atxn1b9943.499Stegastes_partitus
ENSIPUG00000001402atxn110043.578ENSSSCG00000001065ATXN110044.023Sus_scrofa
ENSIPUG00000001402atxn110043.401ENSTGUG00000005986ATXN110043.757Taeniopygia_guttata
ENSIPUG00000001402atxn19941.533ENSTRUG00000024789atxn1b9941.820Takifugu_rubripes
ENSIPUG00000001402atxn110048.910ENSTRUG00000014645atxn1a10050.060Takifugu_rubripes
ENSIPUG00000001402atxn110047.778ENSTNIG00000005089atxn1a10049.138Tetraodon_nigroviridis
ENSIPUG00000001402atxn110042.892ENSTNIG00000018398atxn1b10042.770Tetraodon_nigroviridis
ENSIPUG00000001402atxn110043.677ENSTTRG00000014678ATXN19643.728Tursiops_truncatus
ENSIPUG00000001402atxn110043.641ENSUAMG00000004064ATXN110043.991Ursus_americanus
ENSIPUG00000001402atxn15650.325ENSUMAG00000017635-9150.759Ursus_maritimus
ENSIPUG00000001402atxn110045.128ENSVVUG00000003386ATXN110045.360Vulpes_vulpes
ENSIPUG00000001402atxn110043.900ENSXETG00000014184atxn110043.525Xenopus_tropicalis
ENSIPUG00000001402atxn19940.613ENSXCOG00000019714atxn1b9841.227Xiphophorus_couchianus
ENSIPUG00000001402atxn110048.727ENSXCOG00000020061atxn1a10049.091Xiphophorus_couchianus
ENSIPUG00000001402atxn110048.878ENSXMAG00000003615atxn1a10050.000Xiphophorus_maculatus
ENSIPUG00000001402atxn19940.672ENSXMAG00000014270atxn1b9941.599Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us