EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001406 (Gene tree)
Gene ID: 108264898
Gene Symbol: Riok3
Alias: fb10c11|wu:fb10c11|zgc:100972
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16350 bases
Position: chr1:4715869-4732218
Accession: 108264898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002023	RIO1	PF01163.22	2.5e-71	1	1
ENSIPUP00000002039	RIO1	PF01163.22	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002126	-	3871	XM_017466879	ENSIPUP00000002023	504 (aa)	XP_017322368	W5U7T0
ENSIPUT00000002142	-	1512	-	ENSIPUP00000002039	503 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000001406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001406	Riok3	60	44.481	ENSIPUG00000003290	riok1	54	44.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001406	Riok3	97	73.239	ENSG00000101782	RIOK3	96	73.239	Homo_sapiens
ENSIPUG00000001406	Riok3	99	75.937	ENSAPOG00000020861	riok3	99	75.937	Acanthochromis_polyacanthus
ENSIPUG00000001406	Riok3	98	72.600	ENSAMEG00000013754	RIOK3	85	70.769	Ailuropoda_melanoleuca
ENSIPUG00000001406	Riok3	99	78.218	ENSACIG00000019894	riok3	99	78.218	Amphilophus_citrinellus
ENSIPUG00000001406	Riok3	99	76.529	ENSAOCG00000007172	riok3	99	76.763	Amphiprion_ocellaris
ENSIPUG00000001406	Riok3	99	76.529	ENSAPEG00000002536	riok3	99	76.529	Amphiprion_percula
ENSIPUG00000001406	Riok3	99	77.668	ENSATEG00000018303	riok3	99	77.668	Anabas_testudineus
ENSIPUG00000001406	Riok3	97	73.600	ENSAPLG00000006497	RIOK3	96	72.800	Anas_platyrhynchos
ENSIPUG00000001406	Riok3	97	75.101	ENSACAG00000000159	RIOK3	95	75.101	Anolis_carolinensis
ENSIPUG00000001406	Riok3	88	59.513	ENSANAG00000030146	RIOK3	90	59.513	Aotus_nancymaae
ENSIPUG00000001406	Riok3	95	79.210	ENSACLG00000018966	riok3	98	79.210	Astatotilapia_calliptera
ENSIPUG00000001406	Riok3	98	86.640	ENSAMXG00000015617	riok3	99	86.139	Astyanax_mexicanus
ENSIPUG00000001406	Riok3	97	73.239	ENSBTAG00000010042	RIOK3	96	73.239	Bos_taurus
ENSIPUG00000001406	Riok3	92	34.553	WBGene00014012	riok-3	91	33.803	Caenorhabditis_elegans
ENSIPUG00000001406	Riok3	98	72.600	ENSCJAG00000020556	RIOK3	96	72.600	Callithrix_jacchus
ENSIPUG00000001406	Riok3	97	73.239	ENSCAFG00000018201	RIOK3	96	73.239	Canis_familiaris
ENSIPUG00000001406	Riok3	97	73.878	ENSCAFG00020014801	RIOK3	99	76.098	Canis_lupus_dingo
ENSIPUG00000001406	Riok3	97	73.333	ENSCHIG00000009312	RIOK3	98	73.333	Capra_hircus
ENSIPUG00000001406	Riok3	97	73.000	ENSTSYG00000000142	RIOK3	95	74.651	Carlito_syrichta
ENSIPUG00000001406	Riok3	88	77.405	ENSCAPG00000005756	RIOK3	92	77.405	Cavia_aperea
ENSIPUG00000001406	Riok3	97	74.044	ENSCPOG00000007991	RIOK3	96	74.044	Cavia_porcellus
ENSIPUG00000001406	Riok3	98	72.600	ENSCCAG00000028338	RIOK3	95	75.117	Cebus_capucinus
ENSIPUG00000001406	Riok3	97	72.636	ENSCATG00000040824	RIOK3	96	74.648	Cercocebus_atys
ENSIPUG00000001406	Riok3	97	73.896	ENSCLAG00000006767	RIOK3	95	73.896	Chinchilla_lanigera
ENSIPUG00000001406	Riok3	97	72.636	ENSCSAG00000017680	RIOK3	96	72.636	Chlorocebus_sabaeus
ENSIPUG00000001406	Riok3	85	73.810	ENSCHOG00000008343	RIOK3	83	73.810	Choloepus_hoffmanni
ENSIPUG00000001406	Riok3	99	72.832	ENSCPBG00000027226	RIOK3	97	74.354	Chrysemys_picta_bellii
ENSIPUG00000001406	Riok3	94	49.008	ENSCSAVG00000003068	-	99	50.725	Ciona_savignyi
ENSIPUG00000001406	Riok3	97	60.526	ENSCANG00000035939	RIOK3	90	74.212	Colobus_angolensis_palliatus
ENSIPUG00000001406	Riok3	97	72.837	ENSCGRG00001013249	Riok3	96	73.441	Cricetulus_griseus_chok1gshd
ENSIPUG00000001406	Riok3	97	72.636	ENSCGRG00000017636	Riok3	96	73.239	Cricetulus_griseus_crigri
ENSIPUG00000001406	Riok3	99	74.303	ENSCSEG00000018289	riok3	99	75.158	Cynoglossus_semilaevis
ENSIPUG00000001406	Riok3	99	75.697	ENSCVAG00000011848	riok3	99	75.697	Cyprinodon_variegatus
ENSIPUG00000001406	Riok3	100	82.643	ENSDARG00000042751	riok3	99	82.643	Danio_rerio
ENSIPUG00000001406	Riok3	97	73.642	ENSDNOG00000039433	RIOK3	96	73.642	Dasypus_novemcinctus
ENSIPUG00000001406	Riok3	97	73.239	ENSDORG00000011663	Riok3	96	73.239	Dipodomys_ordii
ENSIPUG00000001406	Riok3	92	40.377	FBgn0031643	CG3008	86	40.377	Drosophila_melanogaster
ENSIPUG00000001406	Riok3	91	73.118	ENSETEG00000003689	RIOK3	96	73.118	Echinops_telfairi
ENSIPUG00000001406	Riok3	95	52.469	ENSEBUG00000000555	riok3	95	52.577	Eptatretus_burgeri
ENSIPUG00000001406	Riok3	99	71.401	ENSEASG00005002317	RIOK3	100	71.401	Equus_asinus_asinus
ENSIPUG00000001406	Riok3	99	71.820	ENSECAG00000009028	RIOK3	99	71.820	Equus_caballus
ENSIPUG00000001406	Riok3	97	58.635	ENSEEUG00000007005	RIOK3	99	58.635	Erinaceus_europaeus
ENSIPUG00000001406	Riok3	100	77.273	ENSELUG00000017655	riok3	99	77.273	Esox_lucius
ENSIPUG00000001406	Riok3	97	73.441	ENSFCAG00000000517	RIOK3	96	73.441	Felis_catus
ENSIPUG00000001406	Riok3	97	74.597	ENSFALG00000006145	RIOK3	100	71.760	Ficedula_albicollis
ENSIPUG00000001406	Riok3	97	72.289	ENSFDAG00000001548	RIOK3	96	72.289	Fukomys_damarensis
ENSIPUG00000001406	Riok3	99	74.308	ENSFHEG00000011350	riok3	99	74.308	Fundulus_heteroclitus
ENSIPUG00000001406	Riok3	88	77.878	ENSGMOG00000005157	riok3	96	77.878	Gadus_morhua
ENSIPUG00000001406	Riok3	97	74.950	ENSGALG00000015004	RIOK3	97	73.757	Gallus_gallus
ENSIPUG00000001406	Riok3	91	66.234	ENSGAFG00000002403	riok3	88	66.234	Gambusia_affinis
ENSIPUG00000001406	Riok3	99	74.853	ENSGACG00000000880	riok3	99	74.853	Gasterosteus_aculeatus
ENSIPUG00000001406	Riok3	97	73.939	ENSGAGG00000024785	RIOK3	96	73.939	Gopherus_agassizii
ENSIPUG00000001406	Riok3	57	72.945	ENSGGOG00000036734	-	94	72.945	Gorilla_gorilla
ENSIPUG00000001406	Riok3	99	77.228	ENSHBUG00000003233	riok3	99	77.228	Haplochromis_burtoni
ENSIPUG00000001406	Riok3	97	72.892	ENSHGLG00000003885	RIOK3	96	72.892	Heterocephalus_glaber_female
ENSIPUG00000001406	Riok3	97	72.892	ENSHGLG00100002077	RIOK3	96	72.892	Heterocephalus_glaber_male
ENSIPUG00000001406	Riok3	98	73.800	ENSHCOG00000006794	riok3	97	73.800	Hippocampus_comes
ENSIPUG00000001406	Riok3	99	71.760	ENSSTOG00000006517	RIOK3	99	71.760	Ictidomys_tridecemlineatus
ENSIPUG00000001406	Riok3	97	73.054	ENSJJAG00000023689	Riok3	95	72.655	Jaculus_jaculus
ENSIPUG00000001406	Riok3	99	74.651	ENSKMAG00000007259	riok3	99	74.651	Kryptolebias_marmoratus
ENSIPUG00000001406	Riok3	99	75.494	ENSLBEG00000013689	riok3	99	75.494	Labrus_bergylta
ENSIPUG00000001406	Riok3	99	70.530	ENSLACG00000017326	RIOK3	99	70.530	Latimeria_chalumnae
ENSIPUG00000001406	Riok3	99	76.908	ENSLOCG00000001652	riok3	100	76.908	Lepisosteus_oculatus
ENSIPUG00000001406	Riok3	99	71.795	ENSLAFG00000001380	RIOK3	97	71.795	Loxodonta_africana
ENSIPUG00000001406	Riok3	97	72.837	ENSMMUG00000021478	RIOK3	96	74.648	Macaca_mulatta
ENSIPUG00000001406	Riok3	97	62.173	ENSMNEG00000041106	RIOK3	95	73.243	Macaca_nemestrina
ENSIPUG00000001406	Riok3	97	72.837	ENSMLEG00000028187	RIOK3	96	74.648	Mandrillus_leucophaeus
ENSIPUG00000001406	Riok3	99	77.932	ENSMAMG00000008502	riok3	99	77.932	Mastacembelus_armatus
ENSIPUG00000001406	Riok3	99	77.426	ENSMZEG00005020212	riok3	99	77.426	Maylandia_zebra
ENSIPUG00000001406	Riok3	97	74.148	ENSMGAG00000010079	RIOK3	96	73.347	Meleagris_gallopavo
ENSIPUG00000001406	Riok3	97	73.482	ENSMAUG00000020527	Riok3	95	73.482	Mesocricetus_auratus
ENSIPUG00000001406	Riok3	98	73.000	ENSMICG00000009293	RIOK3	96	73.000	Microcebus_murinus
ENSIPUG00000001406	Riok3	97	72.672	ENSMOCG00000012114	Riok3	92	72.672	Microtus_ochrogaster
ENSIPUG00000001406	Riok3	95	74.689	ENSMMOG00000019204	riok3	99	74.689	Mola_mola
ENSIPUG00000001406	Riok3	97	74.451	ENSMODG00000021496	RIOK3	96	74.451	Monodelphis_domestica
ENSIPUG00000001406	Riok3	100	77.603	ENSMALG00000020848	riok3	100	77.603	Monopterus_albus
ENSIPUG00000001406	Riok3	98	73.600	MGP_CAROLIEiJ_G0022001	Riok3	96	73.600	Mus_caroli
ENSIPUG00000001406	Riok3	98	73.200	ENSMUSG00000024404	Riok3	95	84.483	Mus_musculus
ENSIPUG00000001406	Riok3	98	73.200	MGP_PahariEiJ_G0018739	Riok3	96	73.200	Mus_pahari
ENSIPUG00000001406	Riok3	97	73.441	ENSMPUG00000005772	RIOK3	96	73.441	Mustela_putorius_furo
ENSIPUG00000001406	Riok3	97	73.000	ENSMLUG00000007081	RIOK3	95	73.000	Myotis_lucifugus
ENSIPUG00000001406	Riok3	99	70.962	ENSNGAG00000011446	Riok3	100	70.962	Nannospalax_galili
ENSIPUG00000001406	Riok3	78	75.661	ENSNBRG00000016677	riok3	84	75.661	Neolamprologus_brichardi
ENSIPUG00000001406	Riok3	97	73.038	ENSNLEG00000006758	RIOK3	96	73.038	Nomascus_leucogenys
ENSIPUG00000001406	Riok3	97	73.054	ENSMEUG00000006292	RIOK3	96	73.054	Notamacropus_eugenii
ENSIPUG00000001406	Riok3	99	71.373	ENSOPRG00000004803	RIOK3	96	73.239	Ochotona_princeps
ENSIPUG00000001406	Riok3	97	72.490	ENSODEG00000006444	RIOK3	96	72.490	Octodon_degus
ENSIPUG00000001406	Riok3	97	76.660	ENSONIG00000013422	riok3	100	76.660	Oreochromis_niloticus
ENSIPUG00000001406	Riok3	95	72.245	ENSOANG00000012074	RIOK3	99	72.245	Ornithorhynchus_anatinus
ENSIPUG00000001406	Riok3	99	72.008	ENSOCUG00000016820	RIOK3	99	72.008	Oryctolagus_cuniculus
ENSIPUG00000001406	Riok3	99	74.553	ENSORLG00000003395	riok3	99	74.553	Oryzias_latipes
ENSIPUG00000001406	Riok3	99	74.553	ENSORLG00020000672	riok3	99	74.553	Oryzias_latipes_hni
ENSIPUG00000001406	Riok3	99	74.553	ENSORLG00015007372	riok3	99	74.553	Oryzias_latipes_hsok
ENSIPUG00000001406	Riok3	99	75.397	ENSOMEG00000001380	riok3	99	75.397	Oryzias_melastigma
ENSIPUG00000001406	Riok3	98	73.600	ENSOGAG00000014502	RIOK3	86	73.600	Otolemur_garnettii
ENSIPUG00000001406	Riok3	97	73.239	ENSOARG00000008042	RIOK3	96	73.239	Ovis_aries
ENSIPUG00000001406	Riok3	97	73.441	ENSPPAG00000030258	RIOK3	95	74.883	Pan_paniscus
ENSIPUG00000001406	Riok3	97	73.441	ENSPPRG00000023302	RIOK3	96	73.441	Panthera_pardus
ENSIPUG00000001406	Riok3	97	73.441	ENSPTIG00000000960	RIOK3	96	73.441	Panthera_tigris_altaica
ENSIPUG00000001406	Riok3	97	73.239	ENSPTRG00000009918	RIOK3	95	74.648	Pan_troglodytes
ENSIPUG00000001406	Riok3	97	72.837	ENSPANG00000011485	RIOK3	96	74.648	Papio_anubis
ENSIPUG00000001406	Riok3	100	79.167	ENSPKIG00000018297	riok3	99	79.167	Paramormyrops_kingsleyae
ENSIPUG00000001406	Riok3	97	73.642	ENSPSIG00000006250	RIOK3	96	73.642	Pelodiscus_sinensis
ENSIPUG00000001406	Riok3	94	73.375	ENSPMGG00000009414	riok3	99	73.375	Periophthalmus_magnuspinnatus
ENSIPUG00000001406	Riok3	97	73.494	ENSPEMG00000023794	Riok3	96	73.494	Peromyscus_maniculatus_bairdii
ENSIPUG00000001406	Riok3	85	69.393	ENSPMAG00000003258	riok3	97	69.393	Petromyzon_marinus
ENSIPUG00000001406	Riok3	93	74.481	ENSPCIG00000013991	RIOK3	99	74.481	Phascolarctos_cinereus
ENSIPUG00000001406	Riok3	97	76.892	ENSPFOG00000024127	riok3	99	75.446	Poecilia_formosa
ENSIPUG00000001406	Riok3	97	76.892	ENSPLAG00000004956	riok3	99	75.446	Poecilia_latipinna
ENSIPUG00000001406	Riok3	97	76.687	ENSPMEG00000020108	riok3	99	75.248	Poecilia_mexicana
ENSIPUG00000001406	Riok3	100	75.099	ENSPREG00000010010	riok3	100	75.099	Poecilia_reticulata
ENSIPUG00000001406	Riok3	97	67.137	ENSPPYG00000009062	RIOK3	95	67.137	Pongo_abelii
ENSIPUG00000001406	Riok3	77	72.180	ENSPCAG00000001021	RIOK3	75	72.180	Procavia_capensis
ENSIPUG00000001406	Riok3	97	73.239	ENSPCOG00000022631	RIOK3	96	75.352	Propithecus_coquereli
ENSIPUG00000001406	Riok3	99	58.994	ENSPVAG00000015817	RIOK3	99	58.221	Pteropus_vampyrus
ENSIPUG00000001406	Riok3	99	77.228	ENSPNYG00000003271	riok3	99	77.228	Pundamilia_nyererei
ENSIPUG00000001406	Riok3	100	85.149	ENSPNAG00000006213	riok3	99	85.149	Pygocentrus_nattereri
ENSIPUG00000001406	Riok3	97	72.435	ENSRNOG00000023376	Riok3	96	73.038	Rattus_norvegicus
ENSIPUG00000001406	Riok3	97	72.672	ENSRBIG00000035071	RIOK3	96	74.648	Rhinopithecus_bieti
ENSIPUG00000001406	Riok3	97	72.672	ENSRROG00000045710	RIOK3	96	74.648	Rhinopithecus_roxellana
ENSIPUG00000001406	Riok3	98	72.600	ENSSBOG00000034387	RIOK3	95	75.117	Saimiri_boliviensis_boliviensis
ENSIPUG00000001406	Riok3	97	73.653	ENSSHAG00000011854	RIOK3	96	73.653	Sarcophilus_harrisii
ENSIPUG00000001406	Riok3	100	78.346	ENSSFOG00015012912	riok3	99	78.346	Scleropages_formosus
ENSIPUG00000001406	Riok3	99	75.794	ENSSMAG00000011527	riok3	99	75.794	Scophthalmus_maximus
ENSIPUG00000001406	Riok3	99	77.712	ENSSDUG00000016018	riok3	99	77.712	Seriola_dumerili
ENSIPUG00000001406	Riok3	62	83.735	ENSSLDG00000022246	riok3	94	83.735	Seriola_lalandi_dorsalis
ENSIPUG00000001406	Riok3	85	74.603	ENSSARG00000010154	RIOK3	83	74.603	Sorex_araneus
ENSIPUG00000001406	Riok3	97	75.862	ENSSPUG00000015246	RIOK3	95	75.862	Sphenodon_punctatus
ENSIPUG00000001406	Riok3	99	76.529	ENSSPAG00000000601	riok3	99	76.529	Stegastes_partitus
ENSIPUG00000001406	Riok3	97	73.441	ENSSSCG00000029518	RIOK3	99	77.169	Sus_scrofa
ENSIPUG00000001406	Riok3	97	74.148	ENSTGUG00000010392	RIOK3	97	72.962	Taeniopygia_guttata
ENSIPUG00000001406	Riok3	99	75.248	ENSTRUG00000007055	riok3	99	75.248	Takifugu_rubripes
ENSIPUG00000001406	Riok3	95	71.784	ENSTNIG00000001855	riok3	99	71.784	Tetraodon_nigroviridis
ENSIPUG00000001406	Riok3	54	83.333	ENSTBEG00000015851	RIOK3	52	83.333	Tupaia_belangeri
ENSIPUG00000001406	Riok3	97	72.545	ENSTTRG00000008839	RIOK3	96	72.545	Tursiops_truncatus
ENSIPUG00000001406	Riok3	100	70.713	ENSUAMG00000018410	RIOK3	100	70.713	Ursus_americanus
ENSIPUG00000001406	Riok3	98	71.429	ENSUMAG00000020218	RIOK3	97	71.429	Ursus_maritimus
ENSIPUG00000001406	Riok3	97	73.642	ENSVPAG00000009034	RIOK3	96	73.642	Vicugna_pacos
ENSIPUG00000001406	Riok3	99	71.373	ENSVVUG00000003651	RIOK3	75	71.373	Vulpes_vulpes
ENSIPUG00000001406	Riok3	99	70.414	ENSXETG00000027370	riok3	99	70.414	Xenopus_tropicalis
ENSIPUG00000001406	Riok3	97	74.645	ENSXCOG00000001032	riok3	100	74.645	Xiphophorus_couchianus
ENSIPUG00000001406	Riok3	99	74.653	ENSXMAG00000012902	riok3	99	74.653	Xiphophorus_maculatus