EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001515 (Gene tree)
Gene ID: 108273826
Gene Symbol: tnrc6b
Alias: fa01f05|fb21h03|fc23h10|hm:zeh0114|im:6968518|wu:fa01f05|wu:fb21h03|wu:fc23h10
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 20830 bases
Position: chr13:16294493-16315322
Accession: 108273826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002115	Ago_hook	PF10427.9	7.6e-09	1	1
ENSIPUP00000002102	Ago_hook	PF10427.9	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002223	-	8325	XM_017483402	ENSIPUP00000002115	1961 (aa)	XP_017338891	A0A2D0S8Y2
ENSIPUT00000002209	-	8445	XM_017483401	ENSIPUP00000002102	2001 (aa)	XP_017338890	A0A2D0S9I1

Gene Model

Click here to download ENSIPUG00000001515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001515	tnrc6b	60	35.830	ENSIPUG00000000818	tnrc6c1	66	35.494
ENSIPUG00000001515	tnrc6b	55	34.226	ENSIPUG00000022767	tnrc6c2	59	34.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001515	tnrc6b	93	50.000	ENSG00000100354	TNRC6B	89	57.522	Homo_sapiens
ENSIPUG00000001515	tnrc6b	93	45.742	ENSAMEG00000011025	TNRC6B	81	45.154	Ailuropoda_melanoleuca
ENSIPUG00000001515	tnrc6b	78	48.574	ENSAPLG00000009347	TNRC6B	68	47.318	Anas_platyrhynchos
ENSIPUG00000001515	tnrc6b	61	52.033	ENSACAG00000007281	TNRC6B	68	49.593	Anolis_carolinensis
ENSIPUG00000001515	tnrc6b	93	50.000	ENSANAG00000035042	TNRC6B	89	57.522	Aotus_nancymaae
ENSIPUG00000001515	tnrc6b	99	78.597	ENSAMXG00000008707	tnrc6b	99	78.575	Astyanax_mexicanus
ENSIPUG00000001515	tnrc6b	93	46.055	ENSBTAG00000021076	TNRC6B	81	46.476	Bos_taurus
ENSIPUG00000001515	tnrc6b	93	50.138	ENSCJAG00000002732	TNRC6B	89	57.522	Callithrix_jacchus
ENSIPUG00000001515	tnrc6b	93	45.899	ENSCAFG00000001255	TNRC6B	81	46.993	Canis_familiaris
ENSIPUG00000001515	tnrc6b	91	46.142	ENSCAFG00020002189	TNRC6B	78	45.604	Canis_lupus_dingo
ENSIPUG00000001515	tnrc6b	95	44.958	ENSCHIG00000003491	TNRC6B	81	44.868	Capra_hircus
ENSIPUG00000001515	tnrc6b	94	46.341	ENSTSYG00000011836	TNRC6B	89	57.522	Carlito_syrichta
ENSIPUG00000001515	tnrc6b	93	46.009	ENSCPOG00000005705	TNRC6B	80	44.453	Cavia_porcellus
ENSIPUG00000001515	tnrc6b	93	47.928	ENSCCAG00000019912	TNRC6B	89	57.522	Cebus_capucinus
ENSIPUG00000001515	tnrc6b	93	49.239	ENSCATG00000029291	TNRC6B	89	57.522	Cercocebus_atys
ENSIPUG00000001515	tnrc6b	91	46.148	ENSCLAG00000016942	TNRC6B	77	44.603	Chinchilla_lanigera
ENSIPUG00000001515	tnrc6b	93	42.567	ENSCSAG00000006021	TNRC6B	80	40.749	Chlorocebus_sabaeus
ENSIPUG00000001515	tnrc6b	85	45.493	ENSCPBG00000022932	TNRC6B	81	43.766	Chrysemys_picta_bellii
ENSIPUG00000001515	tnrc6b	95	49.931	ENSCANG00000030776	TNRC6B	89	57.522	Colobus_angolensis_palliatus
ENSIPUG00000001515	tnrc6b	87	48.039	ENSCGRG00001020166	Tnrc6b	76	46.778	Cricetulus_griseus_chok1gshd
ENSIPUG00000001515	tnrc6b	95	46.172	ENSCGRG00000016696	Tnrc6b	80	44.409	Cricetulus_griseus_crigri
ENSIPUG00000001515	tnrc6b	95	46.573	ENSDNOG00000012744	TNRC6B	81	45.113	Dasypus_novemcinctus
ENSIPUG00000001515	tnrc6b	94	45.589	ENSDORG00000003386	Tnrc6b	80	43.760	Dipodomys_ordii
ENSIPUG00000001515	tnrc6b	91	39.958	ENSETEG00000006570	TNRC6B	79	38.974	Echinops_telfairi
ENSIPUG00000001515	tnrc6b	96	46.370	ENSEASG00005005306	TNRC6B	80	43.376	Equus_asinus_asinus
ENSIPUG00000001515	tnrc6b	95	49.727	ENSECAG00000009759	TNRC6B	81	44.231	Equus_caballus
ENSIPUG00000001515	tnrc6b	93	49.388	ENSFCAG00000004791	TNRC6B	82	45.243	Felis_catus
ENSIPUG00000001515	tnrc6b	90	45.705	ENSFALG00000012195	TNRC6B	80	44.066	Ficedula_albicollis
ENSIPUG00000001515	tnrc6b	93	46.305	ENSFDAG00000021368	TNRC6B	80	45.214	Fukomys_damarensis
ENSIPUG00000001515	tnrc6b	90	49.633	ENSGALG00000012050	TNRC6B	79	45.039	Gallus_gallus
ENSIPUG00000001515	tnrc6b	94	45.519	ENSGAGG00000025188	TNRC6B	79	44.038	Gopherus_agassizii
ENSIPUG00000001515	tnrc6b	93	49.862	ENSGGOG00000008444	TNRC6B	89	57.522	Gorilla_gorilla
ENSIPUG00000001515	tnrc6b	79	45.739	ENSHGLG00000009306	TNRC6B	82	44.760	Heterocephalus_glaber_female
ENSIPUG00000001515	tnrc6b	79	45.804	ENSHGLG00100018108	TNRC6B	79	44.941	Heterocephalus_glaber_male
ENSIPUG00000001515	tnrc6b	93	46.178	ENSSTOG00000008927	TNRC6B	80	44.350	Ictidomys_tridecemlineatus
ENSIPUG00000001515	tnrc6b	95	45.725	ENSJJAG00000015779	Tnrc6b	80	44.231	Jaculus_jaculus
ENSIPUG00000001515	tnrc6b	83	43.086	ENSLACG00000000628	-	67	48.670	Latimeria_chalumnae
ENSIPUG00000001515	tnrc6b	73	50.000	ENSLAFG00000014473	TNRC6B	99	48.829	Loxodonta_africana
ENSIPUG00000001515	tnrc6b	93	45.372	ENSMFAG00000003862	TNRC6B	89	57.522	Macaca_fascicularis
ENSIPUG00000001515	tnrc6b	93	46.148	ENSMMUG00000021345	TNRC6B	89	57.522	Macaca_mulatta
ENSIPUG00000001515	tnrc6b	93	46.069	ENSMNEG00000042745	TNRC6B	80	45.700	Macaca_nemestrina
ENSIPUG00000001515	tnrc6b	93	49.931	ENSMLEG00000041780	TNRC6B	89	57.522	Mandrillus_leucophaeus
ENSIPUG00000001515	tnrc6b	93	48.560	ENSMGAG00000012333	TNRC6B	81	44.804	Meleagris_gallopavo
ENSIPUG00000001515	tnrc6b	95	46.829	ENSMAUG00000016123	Tnrc6b	79	43.947	Mesocricetus_auratus
ENSIPUG00000001515	tnrc6b	94	46.232	ENSMICG00000014056	TNRC6B	89	57.522	Microcebus_murinus
ENSIPUG00000001515	tnrc6b	91	51.562	ENSMOCG00000020334	Tnrc6b	79	43.730	Microtus_ochrogaster
ENSIPUG00000001515	tnrc6b	80	46.829	MGP_CAROLIEiJ_G0020043	Tnrc6b	80	45.023	Mus_caroli
ENSIPUG00000001515	tnrc6b	80	46.985	ENSMUSG00000047888	Tnrc6b	92	61.728	Mus_musculus
ENSIPUG00000001515	tnrc6b	81	45.330	MGP_PahariEiJ_G0020045	Tnrc6b	79	44.863	Mus_pahari
ENSIPUG00000001515	tnrc6b	80	50.763	MGP_SPRETEiJ_G0020941	Tnrc6b	80	45.179	Mus_spretus
ENSIPUG00000001515	tnrc6b	91	54.054	ENSMPUG00000016442	TNRC6B	82	42.274	Mustela_putorius_furo
ENSIPUG00000001515	tnrc6b	93	49.590	ENSMLUG00000008765	TNRC6B	81	44.612	Myotis_lucifugus
ENSIPUG00000001515	tnrc6b	95	46.309	ENSNGAG00000021294	Tnrc6b	81	43.916	Nannospalax_galili
ENSIPUG00000001515	tnrc6b	70	49.640	ENSNLEG00000015311	TNRC6B	89	57.522	Nomascus_leucogenys
ENSIPUG00000001515	tnrc6b	70	51.678	ENSOPRG00000012054	TNRC6B	60	57.692	Ochotona_princeps
ENSIPUG00000001515	tnrc6b	93	45.997	ENSODEG00000013146	TNRC6B	67	48.688	Octodon_degus
ENSIPUG00000001515	tnrc6b	92	55.766	ENSONIG00000019679	-	98	58.220	Oreochromis_niloticus
ENSIPUG00000001515	tnrc6b	95	45.938	ENSOCUG00000016128	TNRC6B	80	43.590	Oryctolagus_cuniculus
ENSIPUG00000001515	tnrc6b	93	45.940	ENSOGAG00000011096	TNRC6B	81	45.161	Otolemur_garnettii
ENSIPUG00000001515	tnrc6b	93	44.717	ENSOARG00000017238	TNRC6B	80	44.539	Ovis_aries
ENSIPUG00000001515	tnrc6b	93	50.138	ENSPPAG00000028514	TNRC6B	89	57.522	Pan_paniscus
ENSIPUG00000001515	tnrc6b	93	49.454	ENSPPRG00000017741	TNRC6B	89	57.522	Panthera_pardus
ENSIPUG00000001515	tnrc6b	85	45.844	ENSPTIG00000022064	TNRC6B	77	62.963	Panthera_tigris_altaica
ENSIPUG00000001515	tnrc6b	95	50.276	ENSPTRG00000047826	TNRC6B	89	57.522	Pan_troglodytes
ENSIPUG00000001515	tnrc6b	91	39.509	ENSPANG00000009271	TNRC6B	85	53.097	Papio_anubis
ENSIPUG00000001515	tnrc6b	94	45.690	ENSPSIG00000005318	TNRC6B	78	44.647	Pelodiscus_sinensis
ENSIPUG00000001515	tnrc6b	95	46.880	ENSPEMG00000011403	Tnrc6b	79	44.271	Peromyscus_maniculatus_bairdii
ENSIPUG00000001515	tnrc6b	55	48.630	ENSPCIG00000020347	TNRC6B	81	43.225	Phascolarctos_cinereus
ENSIPUG00000001515	tnrc6b	89	54.773	ENSPFOG00000006033	-	96	54.695	Poecilia_formosa
ENSIPUG00000001515	tnrc6b	96	53.350	ENSPLAG00000001418	-	97	52.308	Poecilia_latipinna
ENSIPUG00000001515	tnrc6b	67	66.465	ENSPMEG00000006371	-	72	65.257	Poecilia_mexicana
ENSIPUG00000001515	tnrc6b	89	50.000	ENSPPYG00000011849	TNRC6B	82	44.844	Pongo_abelii
ENSIPUG00000001515	tnrc6b	58	45.937	ENSPCAG00000008739	TNRC6B	62	44.749	Procavia_capensis
ENSIPUG00000001515	tnrc6b	94	46.172	ENSPCOG00000020790	TNRC6B	89	57.522	Propithecus_coquereli
ENSIPUG00000001515	tnrc6b	64	54.457	ENSPVAG00000004975	TNRC6B	58	53.467	Pteropus_vampyrus
ENSIPUG00000001515	tnrc6b	92	80.973	ENSPNAG00000011713	tnrc6b	98	79.694	Pygocentrus_nattereri
ENSIPUG00000001515	tnrc6b	80	46.160	ENSRNOG00000024907	Tnrc6b	79	44.081	Rattus_norvegicus
ENSIPUG00000001515	tnrc6b	95	49.931	ENSRBIG00000035576	TNRC6B	91	57.522	Rhinopithecus_bieti
ENSIPUG00000001515	tnrc6b	95	49.931	ENSRROG00000031135	TNRC6B	89	57.522	Rhinopithecus_roxellana
ENSIPUG00000001515	tnrc6b	90	50.138	ENSSBOG00000029743	TNRC6B	88	79.365	Saimiri_boliviensis_boliviensis
ENSIPUG00000001515	tnrc6b	73	45.401	ENSSPUG00000010801	TNRC6B	79	43.897	Sphenodon_punctatus
ENSIPUG00000001515	tnrc6b	93	49.863	ENSSSCG00000000078	TNRC6B	80	48.494	Sus_scrofa
ENSIPUG00000001515	tnrc6b	85	49.204	ENSTGUG00000010138	-	76	48.840	Taeniopygia_guttata
ENSIPUG00000001515	tnrc6b	94	47.252	ENSTTRG00000011465	TNRC6B	61	48.416	Tursiops_truncatus
ENSIPUG00000001515	tnrc6b	94	44.733	ENSUAMG00000007174	TNRC6B	79	46.789	Ursus_americanus
ENSIPUG00000001515	tnrc6b	93	44.809	ENSUMAG00000014336	TNRC6B	82	45.604	Ursus_maritimus
ENSIPUG00000001515	tnrc6b	54	44.074	ENSVPAG00000001467	TNRC6B	62	70.492	Vicugna_pacos
ENSIPUG00000001515	tnrc6b	95	49.727	ENSVVUG00000007064	TNRC6B	81	45.759	Vulpes_vulpes
ENSIPUG00000001515	tnrc6b	84	52.784	ENSXCOG00000003042	-	97	52.557	Xiphophorus_couchianus