EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001570 (Gene tree)
Gene ID: 108258007
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4256 bases
Position: chr2:26627030-26631285
Accession: 108258007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002180	PseudoU_synth_2	PF00849.22	1.9e-27	1	1
ENSIPUP00000002183	PseudoU_synth_2	PF00849.22	1.9e-27	1	1
ENSIPUP00000002190	PseudoU_synth_2	PF00849.22	2.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002304	-	882	-	ENSIPUP00000002190	293 (aa)	-	-
ENSIPUT00000002296	-	1576	XM_017456234	ENSIPUP00000002183	303 (aa)	XP_017311723	W5U8J0
ENSIPUT00000002291	-	1702	-	ENSIPUP00000002180	303 (aa)	-	W5U8J0

Gene Model

Click here to download ENSIPUG00000001570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001570	rpusd1	99	59.416	ENSG00000007376	RPUSD1	100	70.833	Homo_sapiens
ENSIPUG00000001570	rpusd1	98	66.000	ENSAPOG00000022221	rpusd1	98	66.333	Acanthochromis_polyacanthus
ENSIPUG00000001570	rpusd1	99	60.066	ENSAMEG00000007461	RPUSD1	99	60.726	Ailuropoda_melanoleuca
ENSIPUG00000001570	rpusd1	98	66.557	ENSACIG00000015863	rpusd1	98	66.775	Amphilophus_citrinellus
ENSIPUG00000001570	rpusd1	98	64.356	ENSAOCG00000021975	rpusd1	95	65.347	Amphiprion_ocellaris
ENSIPUG00000001570	rpusd1	98	64.686	ENSAPEG00000001316	rpusd1	95	65.677	Amphiprion_percula
ENSIPUG00000001570	rpusd1	98	64.356	ENSATEG00000002984	rpusd1	98	65.909	Anabas_testudineus
ENSIPUG00000001570	rpusd1	78	62.762	ENSAPLG00000012316	RPUSD1	98	61.134	Anas_platyrhynchos
ENSIPUG00000001570	rpusd1	99	62.667	ENSACAG00000008953	RPUSD1	99	62.542	Anolis_carolinensis
ENSIPUG00000001570	rpusd1	99	58.766	ENSANAG00000024709	RPUSD1	99	58.766	Aotus_nancymaae
ENSIPUG00000001570	rpusd1	98	69.180	ENSACLG00000013692	rpusd1	98	68.197	Astatotilapia_calliptera
ENSIPUG00000001570	rpusd1	99	68.106	ENSAMXG00000019802	rpusd1	99	68.106	Astyanax_mexicanus
ENSIPUG00000001570	rpusd1	99	64.052	ENSBTAG00000000179	RPUSD1	99	64.169	Bos_taurus
ENSIPUG00000001570	rpusd1	99	59.091	ENSCJAG00000012253	RPUSD1	99	59.091	Callithrix_jacchus
ENSIPUG00000001570	rpusd1	99	61.056	ENSCAFG00000019614	RPUSD1	99	61.056	Canis_familiaris
ENSIPUG00000001570	rpusd1	99	61.056	ENSCAFG00020008891	RPUSD1	99	61.056	Canis_lupus_dingo
ENSIPUG00000001570	rpusd1	99	64.495	ENSCHIG00000012872	RPUSD1	99	64.169	Capra_hircus
ENSIPUG00000001570	rpusd1	99	59.406	ENSTSYG00000036934	RPUSD1	99	59.406	Carlito_syrichta
ENSIPUG00000001570	rpusd1	99	59.736	ENSCAPG00000014219	RPUSD1	99	59.736	Cavia_aperea
ENSIPUG00000001570	rpusd1	99	59.736	ENSCPOG00000034604	RPUSD1	99	59.736	Cavia_porcellus
ENSIPUG00000001570	rpusd1	99	59.416	ENSCCAG00000034385	RPUSD1	99	59.416	Cebus_capucinus
ENSIPUG00000001570	rpusd1	99	59.416	ENSCATG00000042983	RPUSD1	99	59.416	Cercocebus_atys
ENSIPUG00000001570	rpusd1	99	60.197	ENSCLAG00000013966	RPUSD1	99	60.197	Chinchilla_lanigera
ENSIPUG00000001570	rpusd1	99	59.091	ENSCSAG00000012121	RPUSD1	99	59.091	Chlorocebus_sabaeus
ENSIPUG00000001570	rpusd1	99	65.017	ENSCPBG00000021101	RPUSD1	100	65.017	Chrysemys_picta_bellii
ENSIPUG00000001570	rpusd1	83	66.535	ENSCANG00000028576	RPUSD1	79	78.641	Colobus_angolensis_palliatus
ENSIPUG00000001570	rpusd1	99	61.056	ENSCGRG00001014253	Rpusd1	99	61.056	Cricetulus_griseus_chok1gshd
ENSIPUG00000001570	rpusd1	99	61.056	ENSCGRG00000017995	Rpusd1	99	61.056	Cricetulus_griseus_crigri
ENSIPUG00000001570	rpusd1	99	66.000	ENSCSEG00000018512	rpusd1	99	65.000	Cynoglossus_semilaevis
ENSIPUG00000001570	rpusd1	99	65.552	ENSCVAG00000022746	rpusd1	98	65.552	Cyprinodon_variegatus
ENSIPUG00000001570	rpusd1	99	71.429	ENSDARG00000060192	rpusd1	99	71.096	Danio_rerio
ENSIPUG00000001570	rpusd1	99	60.784	ENSDNOG00000003721	RPUSD1	99	61.438	Dasypus_novemcinctus
ENSIPUG00000001570	rpusd1	99	59.736	ENSDORG00000026656	Rpusd1	99	59.736	Dipodomys_ordii
ENSIPUG00000001570	rpusd1	97	49.679	ENSEBUG00000008767	rpusd1	92	49.679	Eptatretus_burgeri
ENSIPUG00000001570	rpusd1	99	60.577	ENSEASG00005018421	RPUSD1	75	60.577	Equus_asinus_asinus
ENSIPUG00000001570	rpusd1	99	65.161	ENSELUG00000014307	rpusd1	88	66.337	Esox_lucius
ENSIPUG00000001570	rpusd1	99	60.726	ENSFCAG00000010359	RPUSD1	99	60.396	Felis_catus
ENSIPUG00000001570	rpusd1	99	65.116	ENSFALG00000003211	RPUSD1	99	64.784	Ficedula_albicollis
ENSIPUG00000001570	rpusd1	99	59.736	ENSFDAG00000013398	RPUSD1	99	59.868	Fukomys_damarensis
ENSIPUG00000001570	rpusd1	99	65.563	ENSFHEG00000004736	rpusd1	98	67.219	Fundulus_heteroclitus
ENSIPUG00000001570	rpusd1	98	61.589	ENSGMOG00000010756	rpusd1	98	61.921	Gadus_morhua
ENSIPUG00000001570	rpusd1	99	65.347	ENSGALG00000005315	RPUSD1	99	64.145	Gallus_gallus
ENSIPUG00000001570	rpusd1	98	66.779	ENSGAFG00000009886	rpusd1	98	66.779	Gambusia_affinis
ENSIPUG00000001570	rpusd1	98	66.445	ENSGACG00000014276	rpusd1	97	66.445	Gasterosteus_aculeatus
ENSIPUG00000001570	rpusd1	99	64.356	ENSGAGG00000004181	RPUSD1	100	64.356	Gopherus_agassizii
ENSIPUG00000001570	rpusd1	99	59.416	ENSGGOG00000013997	RPUSD1	79	80.583	Gorilla_gorilla
ENSIPUG00000001570	rpusd1	99	68.627	ENSHBUG00000023728	rpusd1	98	67.869	Haplochromis_burtoni
ENSIPUG00000001570	rpusd1	99	59.868	ENSHGLG00000002595	RPUSD1	99	59.868	Heterocephalus_glaber_female
ENSIPUG00000001570	rpusd1	99	59.868	ENSHGLG00100014303	RPUSD1	99	59.868	Heterocephalus_glaber_male
ENSIPUG00000001570	rpusd1	100	64.590	ENSHCOG00000002390	rpusd1	99	64.784	Hippocampus_comes
ENSIPUG00000001570	rpusd1	99	61.716	ENSSTOG00000004276	RPUSD1	99	61.716	Ictidomys_tridecemlineatus
ENSIPUG00000001570	rpusd1	99	60.726	ENSJJAG00000015696	Rpusd1	99	60.726	Jaculus_jaculus
ENSIPUG00000001570	rpusd1	98	65.436	ENSKMAG00000017287	rpusd1	98	65.217	Kryptolebias_marmoratus
ENSIPUG00000001570	rpusd1	99	63.487	ENSLBEG00000013354	RPUSD1	98	63.816	Labrus_bergylta
ENSIPUG00000001570	rpusd1	99	63.487	ENSLBEG00000022502	rpusd1	98	63.816	Labrus_bergylta
ENSIPUG00000001570	rpusd1	99	66.225	ENSLACG00000008869	RPUSD1	99	66.225	Latimeria_chalumnae
ENSIPUG00000001570	rpusd1	71	80.000	ENSLOCG00000005682	rpusd1	99	80.000	Lepisosteus_oculatus
ENSIPUG00000001570	rpusd1	99	59.539	ENSLAFG00000002115	RPUSD1	99	59.539	Loxodonta_africana
ENSIPUG00000001570	rpusd1	99	59.416	ENSMFAG00000003961	RPUSD1	99	59.416	Macaca_fascicularis
ENSIPUG00000001570	rpusd1	99	59.416	ENSMMUG00000000842	RPUSD1	99	59.416	Macaca_mulatta
ENSIPUG00000001570	rpusd1	99	59.416	ENSMNEG00000042712	RPUSD1	99	59.416	Macaca_nemestrina
ENSIPUG00000001570	rpusd1	99	59.416	ENSMLEG00000030591	RPUSD1	99	59.416	Mandrillus_leucophaeus
ENSIPUG00000001570	rpusd1	98	66.776	ENSMAMG00000004735	rpusd1	98	67.434	Mastacembelus_armatus
ENSIPUG00000001570	rpusd1	98	69.180	ENSMZEG00005003214	rpusd1	98	68.197	Maylandia_zebra
ENSIPUG00000001570	rpusd1	97	65.878	ENSMGAG00000005447	RPUSD1	99	65.878	Meleagris_gallopavo
ENSIPUG00000001570	rpusd1	83	60.236	ENSMAUG00000019998	Rpusd1	96	60.956	Mesocricetus_auratus
ENSIPUG00000001570	rpusd1	99	59.736	ENSMICG00000017561	RPUSD1	99	59.736	Microcebus_murinus
ENSIPUG00000001570	rpusd1	99	61.513	ENSMOCG00000014082	Rpusd1	99	61.513	Microtus_ochrogaster
ENSIPUG00000001570	rpusd1	99	65.017	ENSMMOG00000012569	rpusd1	99	64.474	Mola_mola
ENSIPUG00000001570	rpusd1	99	64.356	ENSMODG00000016882	RPUSD1	98	64.120	Monodelphis_domestica
ENSIPUG00000001570	rpusd1	98	65.789	ENSMALG00000017818	rpusd1	98	66.230	Monopterus_albus
ENSIPUG00000001570	rpusd1	99	61.842	MGP_CAROLIEiJ_G0021244	Rpusd1	99	61.842	Mus_caroli
ENSIPUG00000001570	rpusd1	99	61.842	ENSMUSG00000041199	Rpusd1	99	61.842	Mus_musculus
ENSIPUG00000001570	rpusd1	99	60.784	MGP_PahariEiJ_G0023562	Rpusd1	99	60.784	Mus_pahari
ENSIPUG00000001570	rpusd1	99	61.842	MGP_SPRETEiJ_G0022155	Rpusd1	99	61.842	Mus_spretus
ENSIPUG00000001570	rpusd1	99	59.736	ENSMPUG00000015897	RPUSD1	99	59.736	Mustela_putorius_furo
ENSIPUG00000001570	rpusd1	99	61.489	ENSMLUG00000001089	RPUSD1	99	61.489	Myotis_lucifugus
ENSIPUG00000001570	rpusd1	99	61.842	ENSNGAG00000003595	Rpusd1	99	61.842	Nannospalax_galili
ENSIPUG00000001570	rpusd1	98	69.435	ENSNBRG00000006457	rpusd1	98	69.128	Neolamprologus_brichardi
ENSIPUG00000001570	rpusd1	56	49.123	ENSNLEG00000008424	-	98	49.123	Nomascus_leucogenys
ENSIPUG00000001570	rpusd1	99	63.455	ENSMEUG00000016049	RPUSD1	99	63.455	Notamacropus_eugenii
ENSIPUG00000001570	rpusd1	99	55.776	ENSOPRG00000008340	RPUSD1	99	55.776	Ochotona_princeps
ENSIPUG00000001570	rpusd1	99	60.197	ENSODEG00000016945	RPUSD1	99	60.197	Octodon_degus
ENSIPUG00000001570	rpusd1	98	69.836	ENSONIG00000015672	rpusd1	99	69.836	Oreochromis_niloticus
ENSIPUG00000001570	rpusd1	99	67.667	ENSORLG00000013009	rpusd1	98	67.667	Oryzias_latipes
ENSIPUG00000001570	rpusd1	99	68.317	ENSORLG00020010382	rpusd1	98	68.212	Oryzias_latipes_hni
ENSIPUG00000001570	rpusd1	99	67.550	ENSORLG00015021354	rpusd1	98	67.550	Oryzias_latipes_hsok
ENSIPUG00000001570	rpusd1	98	67.000	ENSOMEG00000021426	rpusd1	98	66.779	Oryzias_melastigma
ENSIPUG00000001570	rpusd1	99	60.714	ENSOGAG00000003795	RPUSD1	99	60.714	Otolemur_garnettii
ENSIPUG00000001570	rpusd1	99	64.052	ENSOARG00000014254	RPUSD1	99	63.816	Ovis_aries
ENSIPUG00000001570	rpusd1	99	60.065	ENSPPAG00000034797	RPUSD1	79	80.583	Pan_paniscus
ENSIPUG00000001570	rpusd1	99	60.726	ENSPPRG00000012389	RPUSD1	99	60.396	Panthera_pardus
ENSIPUG00000001570	rpusd1	99	60.726	ENSPTIG00000008545	RPUSD1	78	73.786	Panthera_tigris_altaica
ENSIPUG00000001570	rpusd1	99	60.065	ENSPTRG00000007565	RPUSD1	79	80.583	Pan_troglodytes
ENSIPUG00000001570	rpusd1	99	59.091	ENSPANG00000024401	RPUSD1	99	59.091	Papio_anubis
ENSIPUG00000001570	rpusd1	99	68.874	ENSPKIG00000018890	rpusd1	90	68.874	Paramormyrops_kingsleyae
ENSIPUG00000001570	rpusd1	99	66.447	ENSPSIG00000013945	RPUSD1	99	66.447	Pelodiscus_sinensis
ENSIPUG00000001570	rpusd1	98	65.541	ENSPMGG00000014950	rpusd1	97	65.552	Periophthalmus_magnuspinnatus
ENSIPUG00000001570	rpusd1	99	62.171	ENSPEMG00000000497	Rpusd1	99	62.171	Peromyscus_maniculatus_bairdii
ENSIPUG00000001570	rpusd1	99	54.636	ENSPMAG00000001563	rpusd1	99	54.605	Petromyzon_marinus
ENSIPUG00000001570	rpusd1	99	64.784	ENSPCIG00000021216	-	93	64.784	Phascolarctos_cinereus
ENSIPUG00000001570	rpusd1	98	67.000	ENSPFOG00000007946	rpusd1	98	66.779	Poecilia_formosa
ENSIPUG00000001570	rpusd1	98	66.779	ENSPLAG00000011925	rpusd1	98	66.779	Poecilia_latipinna
ENSIPUG00000001570	rpusd1	98	67.000	ENSPMEG00000002910	rpusd1	98	66.779	Poecilia_mexicana
ENSIPUG00000001570	rpusd1	99	67.224	ENSPREG00000019851	rpusd1	98	67.450	Poecilia_reticulata
ENSIPUG00000001570	rpusd1	99	48.684	ENSPCAG00000002258	RPUSD1	99	48.684	Procavia_capensis
ENSIPUG00000001570	rpusd1	99	59.416	ENSPCOG00000022582	RPUSD1	99	59.416	Propithecus_coquereli
ENSIPUG00000001570	rpusd1	99	57.419	ENSPVAG00000013104	RPUSD1	99	57.419	Pteropus_vampyrus
ENSIPUG00000001570	rpusd1	99	68.627	ENSPNYG00000024076	rpusd1	98	67.869	Pundamilia_nyererei
ENSIPUG00000001570	rpusd1	99	68.439	ENSPNAG00000013806	rpusd1	99	68.106	Pygocentrus_nattereri
ENSIPUG00000001570	rpusd1	99	60.726	ENSRNOG00000023639	Rpusd1	99	60.726	Rattus_norvegicus
ENSIPUG00000001570	rpusd1	99	59.091	ENSRBIG00000030238	RPUSD1	99	59.091	Rhinopithecus_bieti
ENSIPUG00000001570	rpusd1	99	59.091	ENSRROG00000036663	RPUSD1	99	59.091	Rhinopithecus_roxellana
ENSIPUG00000001570	rpusd1	99	61.386	ENSSBOG00000033063	RPUSD1	99	61.386	Saimiri_boliviensis_boliviensis
ENSIPUG00000001570	rpusd1	99	64.120	ENSSHAG00000013500	RPUSD1	99	64.120	Sarcophilus_harrisii
ENSIPUG00000001570	rpusd1	99	69.103	ENSSFOG00015014394	rpusd1	99	68.771	Scleropages_formosus
ENSIPUG00000001570	rpusd1	99	64.474	ENSSMAG00000008045	rpusd1	91	65.677	Scophthalmus_maximus
ENSIPUG00000001570	rpusd1	86	70.881	ENSSDUG00000001829	rpusd1	95	66.667	Seriola_dumerili
ENSIPUG00000001570	rpusd1	86	70.881	ENSSLDG00000020853	rpusd1	95	66.667	Seriola_lalandi_dorsalis
ENSIPUG00000001570	rpusd1	54	71.856	ENSSARG00000011187	-	100	71.856	Sorex_araneus
ENSIPUG00000001570	rpusd1	63	56.995	ENSSPUG00000005119	-	99	57.068	Sphenodon_punctatus
ENSIPUG00000001570	rpusd1	98	66.007	ENSSPAG00000012708	rpusd1	98	67.327	Stegastes_partitus
ENSIPUG00000001570	rpusd1	99	61.935	ENSSSCG00000008000	RPUSD1	98	69.020	Sus_scrofa
ENSIPUG00000001570	rpusd1	83	69.841	ENSTGUG00000015375	RPUSD1	99	69.841	Taeniopygia_guttata
ENSIPUG00000001570	rpusd1	99	64.262	ENSTRUG00000003041	rpusd1	98	64.803	Takifugu_rubripes
ENSIPUG00000001570	rpusd1	99	61.873	ENSTNIG00000002660	rpusd1	99	61.538	Tetraodon_nigroviridis
ENSIPUG00000001570	rpusd1	99	62.903	ENSTTRG00000010167	RPUSD1	99	62.903	Tursiops_truncatus
ENSIPUG00000001570	rpusd1	99	60.726	ENSUAMG00000012736	RPUSD1	99	60.726	Ursus_americanus
ENSIPUG00000001570	rpusd1	99	60.396	ENSUMAG00000021174	RPUSD1	99	60.396	Ursus_maritimus
ENSIPUG00000001570	rpusd1	99	62.046	ENSVVUG00000012357	RPUSD1	99	60.726	Vulpes_vulpes
ENSIPUG00000001570	rpusd1	99	66.113	ENSXETG00000007184	rpusd1	99	65.449	Xenopus_tropicalis
ENSIPUG00000001570	rpusd1	99	66.890	ENSXCOG00000017930	rpusd1	98	67.114	Xiphophorus_couchianus
ENSIPUG00000001570	rpusd1	99	67.559	ENSXMAG00000024084	rpusd1	98	67.785	Xiphophorus_maculatus