EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001584 (Gene tree)
Gene ID: 108268932
Gene Symbol: Ppargc1b
Alias: fb55c08|perc1b|sb:cb520|si:bz1d10.4|wu:fb55c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator 1-beta-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 40915 bases
Position: chr8:14681360-14722274
Accession: 108268932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002211	RRM_1	PF00076.22	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002326	-	2505	XM_017474300	ENSIPUP00000002211	834 (aa)	XP_017329789	W5USQ9

Gene Model

Click here to download ENSIPUG00000001584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001584	Ppargc1b	76	41.667	ENSAPLG00000009977	PPARGC1B	66	41.667	Anas_platyrhynchos
ENSIPUG00000001584	Ppargc1b	73	42.276	ENSACAG00000015737	PPARGC1B	62	42.276	Anolis_carolinensis
ENSIPUG00000001584	Ppargc1b	100	69.977	ENSAMXG00000010665	ppargc1b	100	69.630	Astyanax_mexicanus
ENSIPUG00000001584	Ppargc1b	82	40.252	ENSBTAG00000012943	PPARGC1B	53	40.789	Bos_taurus
ENSIPUG00000001584	Ppargc1b	82	38.365	ENSCJAG00000021113	PPARGC1B	65	40.123	Callithrix_jacchus
ENSIPUG00000001584	Ppargc1b	64	39.873	ENSTSYG00000034354	PPARGC1B	69	41.139	Carlito_syrichta
ENSIPUG00000001584	Ppargc1b	78	40.458	ENSCPOG00000001958	PPARGC1B	63	40.458	Cavia_porcellus
ENSIPUG00000001584	Ppargc1b	82	37.736	ENSCCAG00000026909	PPARGC1B	73	38.889	Cebus_capucinus
ENSIPUG00000001584	Ppargc1b	71	55.000	ENSCATG00000030402	PPARGC1B	60	55.000	Cercocebus_atys
ENSIPUG00000001584	Ppargc1b	78	40.458	ENSCLAG00000015452	PPARGC1B	66	39.375	Chinchilla_lanigera
ENSIPUG00000001584	Ppargc1b	79	39.873	ENSCSAG00000011792	PPARGC1B	72	40.994	Chlorocebus_sabaeus
ENSIPUG00000001584	Ppargc1b	73	44.000	ENSCPBG00000007891	PPARGC1B	67	39.759	Chrysemys_picta_bellii
ENSIPUG00000001584	Ppargc1b	71	55.000	ENSCANG00000037487	PPARGC1B	60	55.000	Colobus_angolensis_palliatus
ENSIPUG00000001584	Ppargc1b	76	42.276	ENSCGRG00001017949	Ppargc1b	61	42.276	Cricetulus_griseus_chok1gshd
ENSIPUG00000001584	Ppargc1b	76	42.276	ENSCGRG00000008387	Ppargc1b	63	42.276	Cricetulus_griseus_crigri
ENSIPUG00000001584	Ppargc1b	93	96.154	ENSDARG00000101569	ppargc1b	100	96.154	Danio_rerio
ENSIPUG00000001584	Ppargc1b	84	38.365	ENSEASG00005002826	PPARGC1B	54	55.372	Equus_asinus_asinus
ENSIPUG00000001584	Ppargc1b	100	56.522	ENSELUG00000014929	ppargc1b	100	56.187	Esox_lucius
ENSIPUG00000001584	Ppargc1b	82	43.307	ENSFALG00000008858	PPARGC1B	66	45.000	Ficedula_albicollis
ENSIPUG00000001584	Ppargc1b	77	39.695	ENSFDAG00000008719	PPARGC1B	67	36.970	Fukomys_damarensis
ENSIPUG00000001584	Ppargc1b	73	41.600	ENSGAGG00000012870	PPARGC1B	67	41.481	Gopherus_agassizii
ENSIPUG00000001584	Ppargc1b	80	39.873	ENSGGOG00000009505	PPARGC1B	59	52.041	Gorilla_gorilla
ENSIPUG00000001584	Ppargc1b	74	39.344	ENSJJAG00000018633	Ppargc1b	57	41.892	Jaculus_jaculus
ENSIPUG00000001584	Ppargc1b	72	40.870	ENSLACG00000011232	PPARGC1B	62	40.870	Latimeria_chalumnae
ENSIPUG00000001584	Ppargc1b	100	50.447	ENSLOCG00000012195	ppargc1b	100	50.000	Lepisosteus_oculatus
ENSIPUG00000001584	Ppargc1b	83	41.463	ENSLAFG00000012339	PPARGC1B	57	37.576	Loxodonta_africana
ENSIPUG00000001584	Ppargc1b	82	39.873	ENSMFAG00000042269	PPARGC1B	73	40.994	Macaca_fascicularis
ENSIPUG00000001584	Ppargc1b	82	39.873	ENSMMUG00000004749	PPARGC1B	73	40.994	Macaca_mulatta
ENSIPUG00000001584	Ppargc1b	82	39.241	ENSMNEG00000034121	PPARGC1B	73	40.373	Macaca_nemestrina
ENSIPUG00000001584	Ppargc1b	79	39.873	ENSMLEG00000040973	PPARGC1B	72	40.994	Mandrillus_leucophaeus
ENSIPUG00000001584	Ppargc1b	78	42.623	ENSMAUG00000014191	Ppargc1b	73	38.125	Mesocricetus_auratus
ENSIPUG00000001584	Ppargc1b	83	37.736	ENSMICG00000002702	PPARGC1B	54	40.506	Microcebus_murinus
ENSIPUG00000001584	Ppargc1b	78	42.276	MGP_CAROLIEiJ_G0022323	Ppargc1b	58	41.228	Mus_caroli
ENSIPUG00000001584	Ppargc1b	78	42.276	ENSMUSG00000033871	Ppargc1b	73	37.107	Mus_musculus
ENSIPUG00000001584	Ppargc1b	78	42.276	MGP_PahariEiJ_G0019053	Ppargc1b	74	36.196	Mus_pahari
ENSIPUG00000001584	Ppargc1b	78	42.276	MGP_SPRETEiJ_G0023235	Ppargc1b	73	37.107	Mus_spretus
ENSIPUG00000001584	Ppargc1b	88	36.709	ENSNGAG00000016998	Ppargc1b	73	37.805	Nannospalax_galili
ENSIPUG00000001584	Ppargc1b	82	39.873	ENSNLEG00000010193	PPARGC1B	53	50.413	Nomascus_leucogenys
ENSIPUG00000001584	Ppargc1b	75	41.803	ENSOPRG00000010017	PPARGC1B	51	39.241	Ochotona_princeps
ENSIPUG00000001584	Ppargc1b	70	54.098	ENSODEG00000004901	PPARGC1B	54	54.167	Octodon_degus
ENSIPUG00000001584	Ppargc1b	82	40.164	ENSOANG00000009368	PPARGC1B	71	51.579	Ornithorhynchus_anatinus
ENSIPUG00000001584	Ppargc1b	76	43.802	ENSOCUG00000013833	PPARGC1B	56	38.854	Oryctolagus_cuniculus
ENSIPUG00000001584	Ppargc1b	80	39.873	ENSPPAG00000035226	PPARGC1B	72	40.491	Pan_paniscus
ENSIPUG00000001584	Ppargc1b	73	55.000	ENSPTRG00000017403	PPARGC1B	60	55.000	Pan_troglodytes
ENSIPUG00000001584	Ppargc1b	71	55.000	ENSPANG00000009512	PPARGC1B	60	55.000	Papio_anubis
ENSIPUG00000001584	Ppargc1b	73	41.985	ENSPSIG00000008358	PPARGC1B	65	41.985	Pelodiscus_sinensis
ENSIPUG00000001584	Ppargc1b	78	42.276	ENSPEMG00000018822	Ppargc1b	73	37.267	Peromyscus_maniculatus_bairdii
ENSIPUG00000001584	Ppargc1b	82	36.943	ENSPVAG00000001308	PPARGC1B	67	38.037	Pteropus_vampyrus
ENSIPUG00000001584	Ppargc1b	100	71.145	ENSPNAG00000023871	ppargc1b	100	70.994	Pygocentrus_nattereri
ENSIPUG00000001584	Ppargc1b	77	42.276	ENSRNOG00000017503	Ppargc1b	72	36.646	Rattus_norvegicus
ENSIPUG00000001584	Ppargc1b	71	55.000	ENSRBIG00000036724	PPARGC1B	60	55.000	Rhinopithecus_bieti
ENSIPUG00000001584	Ppargc1b	67	55.172	ENSRROG00000029594	PPARGC1B	71	40.994	Rhinopithecus_roxellana
ENSIPUG00000001584	Ppargc1b	87	57.971	ENSSFOG00015003048	ppargc1b	92	65.714	Scleropages_formosus
ENSIPUG00000001584	Ppargc1b	82	43.548	ENSSPUG00000019271	PPARGC1B	81	43.548	Sphenodon_punctatus
ENSIPUG00000001584	Ppargc1b	80	41.718	ENSSSCG00000014437	PPARGC1B	52	42.105	Sus_scrofa
ENSIPUG00000001584	Ppargc1b	61	39.623	ENSTGUG00000000232	PPARGC1B	53	40.244	Taeniopygia_guttata
ENSIPUG00000001584	Ppargc1b	81	41.463	ENSTTRG00000008430	PPARGC1B	53	40.724	Tursiops_truncatus
ENSIPUG00000001584	Ppargc1b	82	36.628	ENSVVUG00000014358	PPARGC1B	53	40.417	Vulpes_vulpes
ENSIPUG00000001584	Ppargc1b	78	42.063	ENSXETG00000012711	ppargc1b	75	41.803	Xenopus_tropicalis