EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000001677 (Gene tree)
Gene ID: 108274323
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7664 bases
Position: chr13:16375687-16383350
Accession: 108274323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002309	Ribosomal_L1	PF00687.21	2.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002429	-	1709	XM_017484427	ENSIPUP00000002309	378 (aa)	XP_017339916	A0A2D0SBS8

Gene Model

Click here to download ENSIPUG00000001677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001677	rsl1d1	66	46.988	ENSG00000171490	RSL1D1	99	51.592	Homo_sapiens
ENSIPUG00000001677	rsl1d1	94	58.726	ENSAPOG00000004544	rsl1d1	97	58.516	Acanthochromis_polyacanthus
ENSIPUG00000001677	rsl1d1	85	53.416	ENSACIG00000006608	rsl1d1	94	54.037	Amphilophus_citrinellus
ENSIPUG00000001677	rsl1d1	94	57.459	ENSAOCG00000001548	rsl1d1	97	58.333	Amphiprion_ocellaris
ENSIPUG00000001677	rsl1d1	94	57.459	ENSAPEG00000003334	rsl1d1	97	58.333	Amphiprion_percula
ENSIPUG00000001677	rsl1d1	83	56.402	ENSATEG00000009247	rsl1d1	96	56.944	Anabas_testudineus
ENSIPUG00000001677	rsl1d1	79	48.036	ENSAPLG00000004451	RSL1D1	54	55.144	Anas_platyrhynchos
ENSIPUG00000001677	rsl1d1	82	36.826	ENSANAG00000026520	-	70	37.425	Aotus_nancymaae
ENSIPUG00000001677	rsl1d1	94	36.408	ENSANAG00000034590	-	86	37.176	Aotus_nancymaae
ENSIPUG00000001677	rsl1d1	80	40.588	ENSANAG00000028185	-	74	39.831	Aotus_nancymaae
ENSIPUG00000001677	rsl1d1	81	61.587	ENSACLG00000017535	rsl1d1	96	59.943	Astatotilapia_calliptera
ENSIPUG00000001677	rsl1d1	93	64.903	ENSAMXG00000008624	rsl1d1	99	65.135	Astyanax_mexicanus
ENSIPUG00000001677	rsl1d1	67	47.104	ENSBTAG00000014588	RSL1D1	54	47.104	Bos_taurus
ENSIPUG00000001677	rsl1d1	94	37.136	ENSCJAG00000042606	-	86	38.038	Callithrix_jacchus
ENSIPUG00000001677	rsl1d1	94	37.136	ENSCJAG00000008375	-	55	46.863	Callithrix_jacchus
ENSIPUG00000001677	rsl1d1	95	38.480	ENSCAFG00000018865	RSL1D1	82	38.235	Canis_familiaris
ENSIPUG00000001677	rsl1d1	93	31.959	ENSCAFG00020002457	-	51	36.255	Canis_lupus_dingo
ENSIPUG00000001677	rsl1d1	95	39.348	ENSCAFG00020024488	-	82	39.098	Canis_lupus_dingo
ENSIPUG00000001677	rsl1d1	90	41.834	ENSCHIG00000009867	-	80	42.090	Capra_hircus
ENSIPUG00000001677	rsl1d1	89	39.628	ENSCHIG00000018658	-	51	48.178	Capra_hircus
ENSIPUG00000001677	rsl1d1	93	37.500	ENSTSYG00000009276	RSL1D1	61	42.809	Carlito_syrichta
ENSIPUG00000001677	rsl1d1	65	45.418	ENSCPOG00000010630	RSL1D1	88	37.440	Cavia_porcellus
ENSIPUG00000001677	rsl1d1	66	45.382	ENSCCAG00000025197	-	61	42.756	Cebus_capucinus
ENSIPUG00000001677	rsl1d1	97	36.118	ENSCCAG00000031641	-	84	36.090	Cebus_capucinus
ENSIPUG00000001677	rsl1d1	66	47.791	ENSCCAG00000017391	-	85	38.462	Cebus_capucinus
ENSIPUG00000001677	rsl1d1	66	46.988	ENSCATG00000031153	RSL1D1	62	45.387	Cercocebus_atys
ENSIPUG00000001677	rsl1d1	63	46.667	ENSCLAG00000010975	RSL1D1	85	39.312	Chinchilla_lanigera
ENSIPUG00000001677	rsl1d1	66	47.390	ENSCSAG00000008255	RSL1D1	55	45.756	Chlorocebus_sabaeus
ENSIPUG00000001677	rsl1d1	65	54.694	ENSCPBG00000004564	RSL1D1	94	54.976	Chrysemys_picta_bellii
ENSIPUG00000001677	rsl1d1	60	32.159	ENSCING00000011810	-	100	32.159	Ciona_intestinalis
ENSIPUG00000001677	rsl1d1	66	46.988	ENSCANG00000029202	RSL1D1	57	45.387	Colobus_angolensis_palliatus
ENSIPUG00000001677	rsl1d1	64	48.971	ENSCGRG00001014989	Rsl1d1	79	40.771	Cricetulus_griseus_chok1gshd
ENSIPUG00000001677	rsl1d1	64	48.971	ENSCGRG00000001905	Rsl1d1	79	40.771	Cricetulus_griseus_crigri
ENSIPUG00000001677	rsl1d1	82	57.051	ENSCSEG00000019693	rsl1d1	90	55.233	Cynoglossus_semilaevis
ENSIPUG00000001677	rsl1d1	86	58.896	ENSCVAG00000000672	rsl1d1	99	55.858	Cyprinodon_variegatus
ENSIPUG00000001677	rsl1d1	92	61.714	ENSDARG00000055868	rsl1d1	98	59.788	Danio_rerio
ENSIPUG00000001677	rsl1d1	84	37.634	ENSDNOG00000004601	-	56	44.565	Dasypus_novemcinctus
ENSIPUG00000001677	rsl1d1	84	37.838	ENSDNOG00000040779	-	56	44.565	Dasypus_novemcinctus
ENSIPUG00000001677	rsl1d1	92	37.197	ENSDORG00000013432	-	85	34.565	Dipodomys_ordii
ENSIPUG00000001677	rsl1d1	63	45.228	ENSEBUG00000005400	-	58	45.228	Eptatretus_burgeri
ENSIPUG00000001677	rsl1d1	63	48.548	ENSEASG00005011499	RSL1D1	51	48.031	Equus_asinus_asinus
ENSIPUG00000001677	rsl1d1	63	49.378	ENSECAG00000025036	RSL1D1	51	48.819	Equus_caballus
ENSIPUG00000001677	rsl1d1	92	57.759	ENSELUG00000019243	rsl1d1	98	57.471	Esox_lucius
ENSIPUG00000001677	rsl1d1	90	40.310	ENSFCAG00000010114	RSL1D1	79	40.561	Felis_catus
ENSIPUG00000001677	rsl1d1	66	54.618	ENSFALG00000003869	RSL1D1	53	53.725	Ficedula_albicollis
ENSIPUG00000001677	rsl1d1	93	37.533	ENSFDAG00000011414	RSL1D1	62	44.043	Fukomys_damarensis
ENSIPUG00000001677	rsl1d1	86	57.231	ENSFHEG00000017235	rsl1d1	93	55.807	Fundulus_heteroclitus
ENSIPUG00000001677	rsl1d1	69	53.435	ENSGMOG00000013048	rsl1d1	92	53.640	Gadus_morhua
ENSIPUG00000001677	rsl1d1	82	46.809	ENSGALG00000033690	RSL1D1	73	47.826	Gallus_gallus
ENSIPUG00000001677	rsl1d1	96	51.771	ENSGAFG00000020794	rsl1d1	95	52.589	Gambusia_affinis
ENSIPUG00000001677	rsl1d1	93	50.843	ENSGACG00000004483	rsl1d1	96	50.843	Gasterosteus_aculeatus
ENSIPUG00000001677	rsl1d1	66	46.586	ENSGGOG00000013463	RSL1D1	62	43.421	Gorilla_gorilla
ENSIPUG00000001677	rsl1d1	81	61.538	ENSHBUG00000001551	rsl1d1	95	59.885	Haplochromis_burtoni
ENSIPUG00000001677	rsl1d1	65	45.703	ENSHGLG00000006774	RSL1D1	85	40.212	Heterocephalus_glaber_female
ENSIPUG00000001677	rsl1d1	65	45.703	ENSHGLG00100017781	RSL1D1	85	40.212	Heterocephalus_glaber_male
ENSIPUG00000001677	rsl1d1	85	54.630	ENSHCOG00000015208	rsl1d1	90	54.630	Hippocampus_comes
ENSIPUG00000001677	rsl1d1	54	51.471	ENSSTOG00000015400	RSL1D1	55	49.130	Ictidomys_tridecemlineatus
ENSIPUG00000001677	rsl1d1	80	39.091	ENSJJAG00000012115	Rsl1d1	59	41.328	Jaculus_jaculus
ENSIPUG00000001677	rsl1d1	93	57.345	ENSKMAG00000021908	rsl1d1	96	58.757	Kryptolebias_marmoratus
ENSIPUG00000001677	rsl1d1	83	55.696	ENSLBEG00000001076	rsl1d1	95	53.390	Labrus_bergylta
ENSIPUG00000001677	rsl1d1	90	59.302	ENSLOCG00000007416	rsl1d1	79	58.430	Lepisosteus_oculatus
ENSIPUG00000001677	rsl1d1	87	42.276	ENSLAFG00000013664	RSL1D1	53	48.800	Loxodonta_africana
ENSIPUG00000001677	rsl1d1	66	47.390	ENSMFAG00000037288	RSL1D1	55	45.756	Macaca_fascicularis
ENSIPUG00000001677	rsl1d1	66	47.390	ENSMMUG00000019632	RSL1D1	99	51.592	Macaca_mulatta
ENSIPUG00000001677	rsl1d1	66	47.390	ENSMNEG00000044196	RSL1D1	55	45.756	Macaca_nemestrina
ENSIPUG00000001677	rsl1d1	66	47.791	ENSMLEG00000042058	RSL1D1	56	46.125	Mandrillus_leucophaeus
ENSIPUG00000001677	rsl1d1	83	58.805	ENSMAMG00000004385	rsl1d1	98	56.111	Mastacembelus_armatus
ENSIPUG00000001677	rsl1d1	81	61.905	ENSMZEG00005007150	rsl1d1	96	60.227	Maylandia_zebra
ENSIPUG00000001677	rsl1d1	80	45.625	ENSMGAG00000000863	RSL1D1	75	46.951	Meleagris_gallopavo
ENSIPUG00000001677	rsl1d1	90	38.974	ENSMICG00000008229	RSL1D1	80	39.487	Microcebus_murinus
ENSIPUG00000001677	rsl1d1	86	40.286	ENSMOCG00000017724	Rsl1d1	59	46.693	Microtus_ochrogaster
ENSIPUG00000001677	rsl1d1	81	53.055	ENSMMOG00000003730	rsl1d1	100	54.045	Mola_mola
ENSIPUG00000001677	rsl1d1	80	44.545	ENSMODG00000004625	-	72	44.545	Monodelphis_domestica
ENSIPUG00000001677	rsl1d1	80	39.432	ENSMODG00000029494	-	60	41.852	Monodelphis_domestica
ENSIPUG00000001677	rsl1d1	68	65.251	ENSMALG00000009531	rsl1d1	95	57.746	Monopterus_albus
ENSIPUG00000001677	rsl1d1	81	41.916	ENSMUSG00000005846	Rsl1d1	59	45.318	Mus_musculus
ENSIPUG00000001677	rsl1d1	99	37.346	MGP_PahariEiJ_G0016164	Rsl1d1	89	38.425	Mus_pahari
ENSIPUG00000001677	rsl1d1	81	42.090	MGP_SPRETEiJ_G0021352	Rsl1d1	74	41.040	Mus_spretus
ENSIPUG00000001677	rsl1d1	65	48.178	ENSMPUG00000014548	RSL1D1	51	47.638	Mustela_putorius_furo
ENSIPUG00000001677	rsl1d1	98	36.547	ENSMLUG00000000784	RSL1D1	89	36.771	Myotis_lucifugus
ENSIPUG00000001677	rsl1d1	89	37.602	ENSNGAG00000009086	-	53	44.715	Nannospalax_galili
ENSIPUG00000001677	rsl1d1	89	36.997	ENSNGAG00000013578	-	62	41.135	Nannospalax_galili
ENSIPUG00000001677	rsl1d1	91	58.239	ENSNBRG00000002777	rsl1d1	95	58.974	Neolamprologus_brichardi
ENSIPUG00000001677	rsl1d1	63	47.917	ENSNLEG00000012149	-	70	45.756	Nomascus_leucogenys
ENSIPUG00000001677	rsl1d1	66	46.988	ENSNLEG00000010196	-	72	40.741	Nomascus_leucogenys
ENSIPUG00000001677	rsl1d1	89	41.713	ENSOPRG00000004442	-	92	39.808	Ochotona_princeps
ENSIPUG00000001677	rsl1d1	81	59.936	ENSONIG00000019757	rsl1d1	96	58.651	Oreochromis_niloticus
ENSIPUG00000001677	rsl1d1	63	48.739	ENSOANG00000009408	-	56	48.739	Ornithorhynchus_anatinus
ENSIPUG00000001677	rsl1d1	63	46.888	ENSOCUG00000004751	RSL1D1	59	44.086	Oryctolagus_cuniculus
ENSIPUG00000001677	rsl1d1	94	51.955	ENSORLG00000002877	rsl1d1	98	51.117	Oryzias_latipes
ENSIPUG00000001677	rsl1d1	94	51.397	ENSORLG00020006636	rsl1d1	98	50.838	Oryzias_latipes_hni
ENSIPUG00000001677	rsl1d1	94	51.397	ENSORLG00015005427	rsl1d1	98	50.838	Oryzias_latipes_hsok
ENSIPUG00000001677	rsl1d1	84	54.859	ENSOMEG00000008036	rsl1d1	96	50.829	Oryzias_melastigma
ENSIPUG00000001677	rsl1d1	64	47.951	ENSOGAG00000015151	RSL1D1	50	47.951	Otolemur_garnettii
ENSIPUG00000001677	rsl1d1	90	40.106	ENSOARG00000006923	RSL1D1	58	45.390	Ovis_aries
ENSIPUG00000001677	rsl1d1	66	46.988	ENSPPAG00000039716	RSL1D1	62	43.750	Pan_paniscus
ENSIPUG00000001677	rsl1d1	82	40.510	ENSPPRG00000005220	RSL1D1	79	40.561	Panthera_pardus
ENSIPUG00000001677	rsl1d1	90	40.318	ENSPTIG00000005526	RSL1D1	90	37.705	Panthera_tigris_altaica
ENSIPUG00000001677	rsl1d1	66	46.586	ENSPTRG00000007777	RSL1D1	62	43.421	Pan_troglodytes
ENSIPUG00000001677	rsl1d1	66	47.390	ENSPANG00000023073	RSL1D1	55	45.756	Papio_anubis
ENSIPUG00000001677	rsl1d1	94	54.717	ENSPKIG00000022687	rsl1d1	84	58.967	Paramormyrops_kingsleyae
ENSIPUG00000001677	rsl1d1	82	46.386	ENSPSIG00000011642	RSL1D1	73	45.858	Pelodiscus_sinensis
ENSIPUG00000001677	rsl1d1	81	61.039	ENSPMGG00000022261	rsl1d1	100	61.364	Periophthalmus_magnuspinnatus
ENSIPUG00000001677	rsl1d1	62	48.305	ENSPEMG00000009523	Rsl1d1	80	41.226	Peromyscus_maniculatus_bairdii
ENSIPUG00000001677	rsl1d1	55	48.325	ENSPMAG00000005446	rsl1d1	66	40.881	Petromyzon_marinus
ENSIPUG00000001677	rsl1d1	79	46.205	ENSPCIG00000026851	-	75	46.205	Phascolarctos_cinereus
ENSIPUG00000001677	rsl1d1	82	50.592	ENSPFOG00000005017	rsl1d1	70	59.921	Poecilia_formosa
ENSIPUG00000001677	rsl1d1	96	51.344	ENSPLAG00000000482	rsl1d1	78	52.367	Poecilia_latipinna
ENSIPUG00000001677	rsl1d1	96	51.639	ENSPMEG00000007032	rsl1d1	95	50.546	Poecilia_mexicana
ENSIPUG00000001677	rsl1d1	86	51.988	ENSPREG00000016619	rsl1d1	81	51.829	Poecilia_reticulata
ENSIPUG00000001677	rsl1d1	63	47.303	ENSPPYG00000007112	RSL1D1	54	45.387	Pongo_abelii
ENSIPUG00000001677	rsl1d1	79	39.432	ENSPPYG00000019335	-	61	41.636	Pongo_abelii
ENSIPUG00000001677	rsl1d1	80	36.152	ENSPCOG00000022456	RSL1D1	66	41.132	Propithecus_coquereli
ENSIPUG00000001677	rsl1d1	97	37.010	ENSPVAG00000005014	RSL1D1	52	47.222	Pteropus_vampyrus
ENSIPUG00000001677	rsl1d1	81	60.256	ENSPNYG00000002850	rsl1d1	95	58.739	Pundamilia_nyererei
ENSIPUG00000001677	rsl1d1	94	67.680	ENSPNAG00000011848	rsl1d1	99	67.655	Pygocentrus_nattereri
ENSIPUG00000001677	rsl1d1	90	40.164	ENSRNOG00000061236	LOC108348298	79	40.548	Rattus_norvegicus
ENSIPUG00000001677	rsl1d1	90	40.164	ENSRNOG00000048608	Rsl1d1l1	79	40.548	Rattus_norvegicus
ENSIPUG00000001677	rsl1d1	66	46.988	ENSRBIG00000030317	RSL1D1	55	45.387	Rhinopithecus_bieti
ENSIPUG00000001677	rsl1d1	66	46.988	ENSRROG00000033658	RSL1D1	55	45.387	Rhinopithecus_roxellana
ENSIPUG00000001677	rsl1d1	66	45.968	ENSSBOG00000028384	-	53	44.737	Saimiri_boliviensis_boliviensis
ENSIPUG00000001677	rsl1d1	63	48.963	ENSSBOG00000035910	-	54	46.863	Saimiri_boliviensis_boliviensis
ENSIPUG00000001677	rsl1d1	89	54.179	ENSSFOG00015011354	rsl1d1	71	65.323	Scleropages_formosus
ENSIPUG00000001677	rsl1d1	90	57.681	ENSSMAG00000007957	rsl1d1	94	56.812	Scophthalmus_maximus
ENSIPUG00000001677	rsl1d1	95	56.389	ENSSDUG00000008447	rsl1d1	90	56.667	Seriola_dumerili
ENSIPUG00000001677	rsl1d1	96	54.945	ENSSLDG00000008293	rsl1d1	98	55.220	Seriola_lalandi_dorsalis
ENSIPUG00000001677	rsl1d1	82	47.576	ENSSPUG00000007525	RSL1D1	60	52.555	Sphenodon_punctatus
ENSIPUG00000001677	rsl1d1	96	54.331	ENSSPAG00000009755	rsl1d1	98	56.021	Stegastes_partitus
ENSIPUG00000001677	rsl1d1	89	40.483	ENSSSCG00000023984	RSL1D1	56	46.429	Sus_scrofa
ENSIPUG00000001677	rsl1d1	63	53.942	ENSTGUG00000005174	RSL1D1	98	53.942	Taeniopygia_guttata
ENSIPUG00000001677	rsl1d1	94	50.546	ENSTRUG00000016970	rsl1d1	88	55.120	Takifugu_rubripes
ENSIPUG00000001677	rsl1d1	96	52.732	ENSTNIG00000012925	rsl1d1	97	53.552	Tetraodon_nigroviridis
ENSIPUG00000001677	rsl1d1	86	39.945	ENSTTRG00000011629	RSL1D1	77	39.459	Tursiops_truncatus
ENSIPUG00000001677	rsl1d1	94	40.470	ENSUAMG00000004470	RSL1D1	51	49.000	Ursus_americanus
ENSIPUG00000001677	rsl1d1	93	36.456	ENSVVUG00000024962	-	86	35.961	Vulpes_vulpes
ENSIPUG00000001677	rsl1d1	95	38.480	ENSVVUG00000018170	-	82	38.235	Vulpes_vulpes
ENSIPUG00000001677	rsl1d1	81	50.473	ENSXETG00000033365	-	76	48.378	Xenopus_tropicalis
ENSIPUG00000001677	rsl1d1	65	65.306	ENSXCOG00000003117	rsl1d1	99	65.306	Xiphophorus_couchianus
ENSIPUG00000001677	rsl1d1	63	62.917	ENSXMAG00000025111	rsl1d1	69	62.917	Xiphophorus_maculatus