EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2912 bases
Position: chr6:20400462-20403373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002585	PARP	PF00644.20	4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002728	-	1440	-	ENSIPUP00000002585	480 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000001876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001876	-	59	30.208	ENSIPUG00000019562	-	86	30.208
ENSIPUG00000001876	-	54	30.508	ENSIPUG00000009053	PARP11	76	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001876	-	55	34.848	ENSACLG00000005600	-	75	34.848	Astatotilapia_calliptera
ENSIPUG00000001876	-	50	31.020	ENSCVAG00000009352	-	73	31.020	Cyprinodon_variegatus
ENSIPUG00000001876	-	100	57.884	ENSDARG00000098398	CABZ01079480.1	99	57.884	Danio_rerio
ENSIPUG00000001876	-	98	47.647	ENSGMOG00000011217	-	99	47.647	Gadus_morhua
ENSIPUG00000001876	-	52	35.968	ENSGAFG00000015867	-	90	35.968	Gambusia_affinis
ENSIPUG00000001876	-	60	33.219	ENSHBUG00000015159	-	97	33.219	Haplochromis_burtoni
ENSIPUG00000001876	-	54	30.651	ENSMAMG00000018261	-	85	30.651	Mastacembelus_armatus
ENSIPUG00000001876	-	76	30.597	ENSMZEG00005002038	-	87	30.597	Maylandia_zebra
ENSIPUG00000001876	-	52	34.263	ENSMZEG00005027858	-	90	34.263	Maylandia_zebra
ENSIPUG00000001876	-	97	30.178	ENSMZEG00005027852	-	99	30.178	Maylandia_zebra
ENSIPUG00000001876	-	50	43.333	ENSMMOG00000010419	-	55	37.056	Mola_mola
ENSIPUG00000001876	-	57	32.374	ENSNBRG00000002998	-	99	32.374	Neolamprologus_brichardi
ENSIPUG00000001876	-	60	31.650	ENSNBRG00000003116	-	95	31.650	Neolamprologus_brichardi
ENSIPUG00000001876	-	54	31.818	ENSORLG00020014046	-	99	31.818	Oryzias_latipes_hni
ENSIPUG00000001876	-	54	32.210	ENSORLG00015004253	-	84	32.210	Oryzias_latipes_hsok
ENSIPUG00000001876	-	83	38.636	ENSORLG00015004157	-	99	31.818	Oryzias_latipes_hsok
ENSIPUG00000001876	-	54	31.698	ENSOMEG00000009413	-	93	31.698	Oryzias_melastigma
ENSIPUG00000001876	-	100	51.167	ENSPKIG00000004064	-	63	72.222	Paramormyrops_kingsleyae
ENSIPUG00000001876	-	65	31.111	ENSPMEG00000003192	-	92	31.111	Poecilia_mexicana
ENSIPUG00000001876	-	66	40.909	ENSPREG00000017145	-	90	35.178	Poecilia_reticulata
ENSIPUG00000001876	-	60	32.877	ENSPNYG00000008208	-	97	32.877	Pundamilia_nyererei
ENSIPUG00000001876	-	60	32.877	ENSPNYG00000003575	-	85	32.877	Pundamilia_nyererei
ENSIPUG00000001876	-	54	32.075	ENSPNAG00000005029	-	93	32.075	Pygocentrus_nattereri
ENSIPUG00000001876	-	100	73.878	ENSPNAG00000006111	-	100	73.878	Pygocentrus_nattereri
ENSIPUG00000001876	-	60	36.364	ENSPNAG00000026750	-	90	31.295	Pygocentrus_nattereri
ENSIPUG00000001876	-	57	31.408	ENSPNAG00000004111	-	91	31.408	Pygocentrus_nattereri
ENSIPUG00000001876	-	100	49.808	ENSSFOG00015019732	-	58	69.444	Scleropages_formosus
ENSIPUG00000001876	-	100	30.309	ENSSMAG00000016922	-	54	35.349	Scophthalmus_maximus
ENSIPUG00000001876	-	57	31.295	ENSSLDG00000011620	-	92	31.295	Seriola_lalandi_dorsalis
ENSIPUG00000001876	-	54	31.801	ENSSPAG00000014708	-	79	31.801	Stegastes_partitus
ENSIPUG00000001876	-	54	35.115	ENSXCOG00000012535	-	93	35.115	Xiphophorus_couchianus