EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001941 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3863 bases
Position: chr3:259926-263788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	1	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	2	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	3	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	4	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	5	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	6	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	7	8
ENSIPUP00000002696	zf-C2H2	PF00096.26	2.4e-45	8	8
ENSIPUP00000002696	zf-met	PF12874.7	7.3e-14	1	3
ENSIPUP00000002696	zf-met	PF12874.7	7.3e-14	2	3
ENSIPUP00000002696	zf-met	PF12874.7	7.3e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002842	-	882	-	ENSIPUP00000002696	293 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000001941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001941	-	88	57.820	ENSIPUG00000021434	-	98	57.820
ENSIPUG00000001941	-	97	37.500	ENSIPUG00000009577	-	59	37.500
ENSIPUG00000001941	-	83	63.750	ENSIPUG00000007934	-	95	63.750
ENSIPUG00000001941	-	99	61.765	ENSIPUG00000015177	-	79	61.765
ENSIPUG00000001941	-	82	47.945	ENSIPUG00000024011	-	51	47.945
ENSIPUG00000001941	-	83	59.111	ENSIPUG00000021998	-	91	59.111
ENSIPUG00000001941	-	98	61.317	ENSIPUG00000015233	-	92	61.317
ENSIPUG00000001941	-	87	42.439	ENSIPUG00000012109	ZN12	61	42.439
ENSIPUG00000001941	-	89	42.708	ENSIPUG00000000131	snai2	65	42.708
ENSIPUG00000001941	-	97	58.750	ENSIPUG00000015121	-	70	58.750
ENSIPUG00000001941	-	91	37.415	ENSIPUG00000002075	znf341	50	37.415
ENSIPUG00000001941	-	87	37.778	ENSIPUG00000005547	-	51	37.778
ENSIPUG00000001941	-	87	48.438	ENSIPUG00000023761	-	64	48.438
ENSIPUG00000001941	-	94	63.786	ENSIPUG00000015400	-	95	63.786
ENSIPUG00000001941	-	89	62.609	ENSIPUG00000016075	-	95	61.826
ENSIPUG00000001941	-	89	60.656	ENSIPUG00000023688	-	96	60.656
ENSIPUG00000001941	-	89	51.220	ENSIPUG00000005379	e4f1	53	40.120
ENSIPUG00000001941	-	88	56.667	ENSIPUG00000004428	-	85	56.667
ENSIPUG00000001941	-	82	47.500	ENSIPUG00000022266	ZNF135	61	47.500
ENSIPUG00000001941	-	96	56.202	ENSIPUG00000021518	-	94	56.967
ENSIPUG00000001941	-	90	61.181	ENSIPUG00000021515	-	92	61.181
ENSIPUG00000001941	-	99	71.053	ENSIPUG00000015294	-	66	66.463
ENSIPUG00000001941	-	99	42.857	ENSIPUG00000018102	znf646	81	42.857
ENSIPUG00000001941	-	82	42.553	ENSIPUG00000012830	-	78	42.553
ENSIPUG00000001941	-	87	51.456	ENSIPUG00000001248	prdm5	71	51.456
ENSIPUG00000001941	-	82	38.182	ENSIPUG00000021407	-	58	38.182
ENSIPUG00000001941	-	93	53.759	ENSIPUG00000021527	-	93	56.148
ENSIPUG00000001941	-	89	58.065	ENSIPUG00000021484	-	98	58.065
ENSIPUG00000001941	-	93	44.444	ENSIPUG00000004905	znf236	65	44.444
ENSIPUG00000001941	-	89	62.128	ENSIPUG00000009750	-	93	62.128
ENSIPUG00000001941	-	82	31.694	ENSIPUG00000024004	-	80	31.694
ENSIPUG00000001941	-	83	46.639	ENSIPUG00000019205	-	75	46.639
ENSIPUG00000001941	-	83	59.091	ENSIPUG00000022741	-	79	59.091
ENSIPUG00000001941	-	93	56.667	ENSIPUG00000021472	-	87	55.242
ENSIPUG00000001941	-	85	32.941	ENSIPUG00000002510	-	55	32.941
ENSIPUG00000001941	-	84	38.579	ENSIPUG00000011399	zbtb47b	81	38.579
ENSIPUG00000001941	-	88	59.596	ENSIPUG00000003960	-	84	59.596
ENSIPUG00000001941	-	83	51.282	ENSIPUG00000016009	znf596	63	51.282
ENSIPUG00000001941	-	83	61.353	ENSIPUG00000002655	-	98	61.353
ENSIPUG00000001941	-	90	56.561	ENSIPUG00000006936	-	95	56.410
ENSIPUG00000001941	-	83	60.759	ENSIPUG00000005581	-	71	60.759
ENSIPUG00000001941	-	90	64.035	ENSIPUG00000005733	-	76	64.035
ENSIPUG00000001941	-	93	63.095	ENSIPUG00000012960	-	91	63.095
ENSIPUG00000001941	-	91	56.701	ENSIPUG00000015203	-	63	61.404
ENSIPUG00000001941	-	98	39.924	ENSIPUG00000008581	znf319b	94	42.128
ENSIPUG00000001941	-	88	60.199	ENSIPUG00000011073	-	98	60.199
ENSIPUG00000001941	-	83	55.319	ENSIPUG00000013083	-	52	55.319
ENSIPUG00000001941	-	80	41.053	ENSIPUG00000015844	snai1b	58	41.053
ENSIPUG00000001941	-	93	55.747	ENSIPUG00000017575	-	64	55.747
ENSIPUG00000001941	-	86	60.215	ENSIPUG00000005339	-	83	60.215
ENSIPUG00000001941	-	87	62.245	ENSIPUG00000021556	-	97	55.497
ENSIPUG00000001941	-	92	38.614	ENSIPUG00000007076	-	91	38.462
ENSIPUG00000001941	-	93	59.535	ENSIPUG00000003011	-	55	59.535
ENSIPUG00000001941	-	93	65.517	ENSIPUG00000015601	-	63	65.517
ENSIPUG00000001941	-	83	50.820	ENSIPUG00000013315	-	94	50.820
ENSIPUG00000001941	-	82	41.667	ENSIPUG00000012769	gfi1b	51	41.667
ENSIPUG00000001941	-	84	44.175	ENSIPUG00000011652	znf648	74	45.000
ENSIPUG00000001941	-	89	59.052	ENSIPUG00000006916	-	80	59.052
ENSIPUG00000001941	-	99	58.947	ENSIPUG00000022751	-	99	58.333
ENSIPUG00000001941	-	93	56.641	ENSIPUG00000021441	-	98	60.262
ENSIPUG00000001941	-	93	56.398	ENSIPUG00000023635	-	95	58.996
ENSIPUG00000001941	-	82	40.278	ENSIPUG00000003040	zbtb47a	76	40.278
ENSIPUG00000001941	-	94	63.333	ENSIPUG00000015468	-	92	61.290
ENSIPUG00000001941	-	90	37.879	ENSIPUG00000011258	-	86	38.077
ENSIPUG00000001941	-	88	60.584	ENSIPUG00000013065	-	94	58.721
ENSIPUG00000001941	-	84	33.621	ENSIPUG00000015037	znf711	52	30.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001941	-	93	50.216	ENSACIG00000011153	-	82	50.769	Amphilophus_citrinellus
ENSIPUG00000001941	-	99	53.361	ENSACIG00000019791	-	92	52.885	Amphilophus_citrinellus
ENSIPUG00000001941	-	93	48.387	ENSANAG00000032414	-	81	48.387	Aotus_nancymaae
ENSIPUG00000001941	-	83	50.000	ENSACLG00000017329	-	85	50.000	Astatotilapia_calliptera
ENSIPUG00000001941	-	88	45.000	ENSACLG00000014167	-	63	45.000	Astatotilapia_calliptera
ENSIPUG00000001941	-	93	47.619	ENSACLG00000022499	-	90	47.619	Astatotilapia_calliptera
ENSIPUG00000001941	-	83	48.684	ENSACLG00000020474	-	84	48.684	Astatotilapia_calliptera
ENSIPUG00000001941	-	82	50.000	ENSACLG00000001507	-	85	50.000	Astatotilapia_calliptera
ENSIPUG00000001941	-	99	58.929	ENSAMXG00000038324	-	77	58.929	Astyanax_mexicanus
ENSIPUG00000001941	-	83	61.187	ENSAMXG00000031646	-	94	61.187	Astyanax_mexicanus
ENSIPUG00000001941	-	83	64.854	ENSAMXG00000031501	-	88	64.854	Astyanax_mexicanus
ENSIPUG00000001941	-	88	60.630	ENSAMXG00000010078	-	86	60.630	Astyanax_mexicanus
ENSIPUG00000001941	-	97	58.333	ENSAMXG00000031844	-	92	58.333	Astyanax_mexicanus
ENSIPUG00000001941	-	83	63.525	ENSAMXG00000039162	-	94	63.525	Astyanax_mexicanus
ENSIPUG00000001941	-	97	58.333	ENSAMXG00000036849	-	86	60.759	Astyanax_mexicanus
ENSIPUG00000001941	-	88	55.882	ENSAMXG00000039770	-	88	55.882	Astyanax_mexicanus
ENSIPUG00000001941	-	92	47.034	ENSCHIG00000015741	-	94	47.034	Capra_hircus
ENSIPUG00000001941	-	89	53.535	ENSCCAG00000035188	-	84	53.535	Cebus_capucinus
ENSIPUG00000001941	-	83	53.892	ENSCPBG00000001258	-	97	53.892	Chrysemys_picta_bellii
ENSIPUG00000001941	-	92	50.628	ENSDNOG00000048084	-	99	50.628	Dasypus_novemcinctus
ENSIPUG00000001941	-	89	45.798	ENSETEG00000002865	-	81	45.798	Echinops_telfairi
ENSIPUG00000001941	-	97	51.667	ENSEBUG00000012748	-	68	53.488	Eptatretus_burgeri
ENSIPUG00000001941	-	88	42.739	ENSEBUG00000011582	-	72	42.739	Eptatretus_burgeri
ENSIPUG00000001941	-	98	51.626	ENSEBUG00000011479	-	79	51.626	Eptatretus_burgeri
ENSIPUG00000001941	-	88	51.092	ENSEBUG00000008157	-	99	51.092	Eptatretus_burgeri
ENSIPUG00000001941	-	92	48.760	ENSECAG00000035557	-	74	48.760	Equus_caballus
ENSIPUG00000001941	-	92	43.860	ENSFHEG00000016184	-	73	43.860	Fundulus_heteroclitus
ENSIPUG00000001941	-	93	44.033	ENSGMOG00000004315	-	96	44.033	Gadus_morhua
ENSIPUG00000001941	-	83	43.348	ENSGACG00000019863	-	98	43.348	Gasterosteus_aculeatus
ENSIPUG00000001941	-	87	54.357	ENSGAGG00000013851	-	73	54.357	Gopherus_agassizii
ENSIPUG00000001941	-	83	54.357	ENSGAGG00000007230	-	90	54.357	Gopherus_agassizii
ENSIPUG00000001941	-	93	42.802	ENSHBUG00000006238	-	96	42.802	Haplochromis_burtoni
ENSIPUG00000001941	-	84	44.215	ENSHBUG00000013264	-	88	44.215	Haplochromis_burtoni
ENSIPUG00000001941	-	93	51.042	ENSHBUG00000021028	-	87	45.560	Haplochromis_burtoni
ENSIPUG00000001941	-	93	50.481	ENSHBUG00000000146	-	80	50.481	Haplochromis_burtoni
ENSIPUG00000001941	-	89	51.250	ENSHBUG00000017372	-	91	50.413	Haplochromis_burtoni
ENSIPUG00000001941	-	83	50.588	ENSHBUG00000019800	-	93	50.588	Haplochromis_burtoni
ENSIPUG00000001941	-	89	47.826	ENSHGLG00000018394	-	98	49.160	Heterocephalus_glaber_female
ENSIPUG00000001941	-	96	54.733	ENSSTOG00000034297	-	73	54.733	Ictidomys_tridecemlineatus
ENSIPUG00000001941	-	83	53.138	ENSMFAG00000046052	-	85	53.138	Macaca_fascicularis
ENSIPUG00000001941	-	83	53.138	ENSMNEG00000041636	-	85	53.138	Macaca_nemestrina
ENSIPUG00000001941	-	83	53.138	ENSMLEG00000032640	-	85	53.138	Mandrillus_leucophaeus
ENSIPUG00000001941	-	89	51.266	ENSMAMG00000009051	-	91	51.266	Mastacembelus_armatus
ENSIPUG00000001941	-	83	48.963	ENSMZEG00005020736	-	90	47.248	Maylandia_zebra
ENSIPUG00000001941	-	82	44.681	ENSMZEG00005019982	-	95	44.681	Maylandia_zebra
ENSIPUG00000001941	-	98	46.610	ENSMZEG00005027950	-	90	46.610	Maylandia_zebra
ENSIPUG00000001941	-	83	50.655	ENSMZEG00005021421	-	94	50.655	Maylandia_zebra
ENSIPUG00000001941	-	84	48.936	ENSMZEG00005012737	-	81	48.936	Maylandia_zebra
ENSIPUG00000001941	-	90	47.325	ENSMZEG00005027285	-	87	47.325	Maylandia_zebra
ENSIPUG00000001941	-	83	51.852	ENSMALG00000004413	-	94	52.500	Monopterus_albus
ENSIPUG00000001941	-	98	44.309	ENSNBRG00000016603	-	93	44.309	Neolamprologus_brichardi
ENSIPUG00000001941	-	83	49.587	ENSNBRG00000015652	-	83	49.587	Neolamprologus_brichardi
ENSIPUG00000001941	-	89	45.946	ENSNBRG00000016582	-	89	45.946	Neolamprologus_brichardi
ENSIPUG00000001941	-	93	51.630	ENSNBRG00000015873	-	98	48.404	Neolamprologus_brichardi
ENSIPUG00000001941	-	83	50.633	ENSNBRG00000013604	-	76	50.633	Neolamprologus_brichardi
ENSIPUG00000001941	-	92	46.091	ENSONIG00000000122	-	99	46.091	Oreochromis_niloticus
ENSIPUG00000001941	-	99	46.897	ENSONIG00000000093	-	99	46.897	Oreochromis_niloticus
ENSIPUG00000001941	-	83	54.795	ENSONIG00000021124	-	100	54.795	Oreochromis_niloticus
ENSIPUG00000001941	-	99	43.646	ENSONIG00000008953	-	97	43.646	Oreochromis_niloticus
ENSIPUG00000001941	-	89	42.775	ENSONIG00000007931	-	88	43.210	Oreochromis_niloticus
ENSIPUG00000001941	-	92	51.440	ENSONIG00000015166	-	100	51.440	Oreochromis_niloticus
ENSIPUG00000001941	-	89	43.421	ENSONIG00000001834	-	99	43.421	Oreochromis_niloticus
ENSIPUG00000001941	-	93	48.295	ENSONIG00000020516	-	99	48.295	Oreochromis_niloticus
ENSIPUG00000001941	-	92	53.521	ENSORLG00015012951	-	80	45.607	Oryzias_latipes_hsok
ENSIPUG00000001941	-	88	54.622	ENSOGAG00000025289	-	85	55.745	Otolemur_garnettii
ENSIPUG00000001941	-	83	53.138	ENSPANG00000030978	-	89	53.138	Papio_anubis
ENSIPUG00000001941	-	83	49.242	ENSPEMG00000016975	Zfp940	74	48.016	Peromyscus_maniculatus_bairdii
ENSIPUG00000001941	-	97	47.234	ENSPMEG00000004595	-	99	47.234	Poecilia_mexicana
ENSIPUG00000001941	-	98	59.414	ENSPPYG00000009906	-	77	59.414	Pongo_abelii
ENSIPUG00000001941	-	84	42.798	ENSPNYG00000024244	-	93	42.798	Pundamilia_nyererei
ENSIPUG00000001941	-	85	59.259	ENSPNAG00000011625	-	94	61.765	Pygocentrus_nattereri
ENSIPUG00000001941	-	88	62.705	ENSPNAG00000019338	-	97	62.705	Pygocentrus_nattereri
ENSIPUG00000001941	-	83	53.138	ENSSBOG00000029728	-	85	53.138	Saimiri_boliviensis_boliviensis
ENSIPUG00000001941	-	92	56.170	ENSSPUG00000010059	-	84	56.170	Sphenodon_punctatus