EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000001991 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3378 bases
Position: chr8:15150541-15153918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002816	RRM_1	PF00076.22	3.5e-35	1	2
ENSIPUP00000002816	RRM_1	PF00076.22	3.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000002962	-	708	-	ENSIPUP00000002816	235 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000001991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000001991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000001991	-	79	40.782	ENSIPUG00000003732	msi2b	55	36.517
ENSIPUG00000001991	-	87	38.424	ENSIPUG00000006899	dazap1	52	40.761
ENSIPUG00000001991	-	69	40.230	ENSIPUG00000007089	RBM3	58	36.634
ENSIPUG00000001991	-	72	35.882	ENSIPUG00000024954	hnrnpd	56	35.393
ENSIPUG00000001991	-	72	32.353	ENSIPUG00000024951	hnrnpdl	55	32.353
ENSIPUG00000001991	-	75	33.939	ENSIPUG00000012602	pabpc1l	61	33.939
ENSIPUG00000001991	-	72	36.364	ENSIPUG00000001757	rbms2a	50	34.211
ENSIPUG00000001991	-	77	58.553	ENSIPUG00000002023	hnrnpa1a	79	57.714
ENSIPUG00000001991	-	75	58.757	ENSIPUG00000019815	RO32	53	58.757
ENSIPUG00000001991	-	76	60.112	ENSIPUG00000022440	-	71	59.639
ENSIPUG00000001991	-	74	35.227	ENSIPUG00000020220	hnrnpab	52	35.196
ENSIPUG00000001991	-	78	41.304	ENSIPUG00000001976	msi1	57	39.394
ENSIPUG00000001991	-	79	41.341	ENSIPUG00000021097	msi2a	55	41.279
ENSIPUG00000001991	-	76	58.659	ENSIPUG00000022432	hnrnpa1b	63	58.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000001991	-	80	61.780	ENSAPOG00000019369	-	55	62.360	Acanthochromis_polyacanthus
ENSIPUG00000001991	-	77	75.138	ENSACIG00000021815	-	88	75.138	Amphilophus_citrinellus
ENSIPUG00000001991	-	80	61.780	ENSAOCG00000005289	-	55	62.360	Amphiprion_ocellaris
ENSIPUG00000001991	-	80	61.780	ENSAPEG00000004179	-	55	62.360	Amphiprion_percula
ENSIPUG00000001991	-	81	61.053	ENSATEG00000022918	hnrnpa1a	86	61.798	Anabas_testudineus
ENSIPUG00000001991	-	75	81.988	ENSATEG00000003423	-	76	81.988	Anabas_testudineus
ENSIPUG00000001991	-	75	69.492	ENSACAG00000017109	-	55	68.333	Anolis_carolinensis
ENSIPUG00000001991	-	77	62.921	ENSACLG00000006940	-	55	62.921	Astatotilapia_calliptera
ENSIPUG00000001991	-	75	84.659	ENSAMXG00000037730	-	54	84.270	Astyanax_mexicanus
ENSIPUG00000001991	-	79	58.974	ENSCSEG00000007589	hnrnpa1a	68	60.112	Cynoglossus_semilaevis
ENSIPUG00000001991	-	78	75.410	ENSCSEG00000014051	-	72	76.705	Cynoglossus_semilaevis
ENSIPUG00000001991	-	77	62.921	ENSCVAG00000012637	hnrnpa1a	54	63.277	Cyprinodon_variegatus
ENSIPUG00000001991	-	82	69.948	ENSDORG00000026425	-	52	70.879	Dipodomys_ordii
ENSIPUG00000001991	-	87	56.098	ENSELUG00000007372	-	51	60.452	Esox_lucius
ENSIPUG00000001991	-	76	80.899	ENSGMOG00000020353	-	93	80.899	Gadus_morhua
ENSIPUG00000001991	-	77	72.222	ENSGAFG00000016803	-	54	71.823	Gambusia_affinis
ENSIPUG00000001991	-	80	62.304	ENSGAFG00000007751	-	54	63.277	Gambusia_affinis
ENSIPUG00000001991	-	77	62.921	ENSHBUG00000005647	hnrnpa1a	55	62.921	Haplochromis_burtoni
ENSIPUG00000001991	-	76	62.147	ENSKMAG00000020859	-	54	62.147	Kryptolebias_marmoratus
ENSIPUG00000001991	-	77	61.798	ENSLBEG00000010010	hnrnpa1a	53	61.798	Labrus_bergylta
ENSIPUG00000001991	-	76	52.778	ENSMFAG00000028351	-	52	52.778	Macaca_fascicularis
ENSIPUG00000001991	-	79	61.053	ENSMAMG00000007606	-	54	62.360	Mastacembelus_armatus
ENSIPUG00000001991	-	77	62.921	ENSMZEG00005027173	hnrnpa1a	55	62.921	Maylandia_zebra
ENSIPUG00000001991	-	77	62.011	ENSMMOG00000008251	hnrnpa1a	76	61.798	Mola_mola
ENSIPUG00000001991	-	79	61.053	ENSMALG00000014091	hnrnpa1a	53	61.798	Monopterus_albus
ENSIPUG00000001991	-	77	76.111	ENSMALG00000008886	-	88	75.691	Monopterus_albus
ENSIPUG00000001991	-	79	80.108	ENSNBRG00000014469	-	83	82.584	Neolamprologus_brichardi
ENSIPUG00000001991	-	77	62.921	ENSNBRG00000018441	-	55	62.921	Neolamprologus_brichardi
ENSIPUG00000001991	-	78	64.130	ENSORLG00000029240	-	95	63.536	Oryzias_latipes
ENSIPUG00000001991	-	76	62.360	ENSORLG00000008001	-	56	62.360	Oryzias_latipes
ENSIPUG00000001991	-	85	61.029	ENSORLG00020022498	-	85	61.878	Oryzias_latipes_hni
ENSIPUG00000001991	-	76	62.360	ENSORLG00020006582	hnrnpa1a	83	62.360	Oryzias_latipes_hni
ENSIPUG00000001991	-	77	64.045	ENSORLG00020006043	-	61	64.045	Oryzias_latipes_hni
ENSIPUG00000001991	-	77	62.921	ENSORLG00015022294	-	56	62.921	Oryzias_latipes_hsok
ENSIPUG00000001991	-	76	62.921	ENSOMEG00000015959	-	56	62.921	Oryzias_melastigma
ENSIPUG00000001991	-	77	61.453	ENSPMGG00000011804	hnrnpa1a	76	61.582	Periophthalmus_magnuspinnatus
ENSIPUG00000001991	-	77	76.923	ENSPMGG00000016392	-	88	77.348	Periophthalmus_magnuspinnatus
ENSIPUG00000001991	-	80	62.304	ENSPFOG00000001825	-	54	63.277	Poecilia_formosa
ENSIPUG00000001991	-	80	62.304	ENSPMEG00000002425	-	54	63.277	Poecilia_mexicana
ENSIPUG00000001991	-	79	80.541	ENSPNYG00000020729	-	91	82.584	Pundamilia_nyererei
ENSIPUG00000001991	-	77	57.714	ENSPNAG00000007752	hnrnpa1a	72	57.386	Pygocentrus_nattereri
ENSIPUG00000001991	-	80	60.963	ENSPNAG00000021630	-	56	62.147	Pygocentrus_nattereri
ENSIPUG00000001991	-	77	60.674	ENSSMAG00000004641	hnrnpa1a	60	60.674	Scophthalmus_maximus
ENSIPUG00000001991	-	77	76.111	ENSSMAG00000010246	-	80	75.691	Scophthalmus_maximus
ENSIPUG00000001991	-	75	80.473	ENSSMAG00000010279	-	95	80.473	Scophthalmus_maximus
ENSIPUG00000001991	-	97	66.079	ENSSDUG00000002431	-	95	65.639	Seriola_dumerili
ENSIPUG00000001991	-	80	61.702	ENSSDUG00000013908	hnrnpa1a	84	61.878	Seriola_dumerili
ENSIPUG00000001991	-	80	61.702	ENSSLDG00000003718	hnrnpa1a	79	62.048	Seriola_lalandi_dorsalis
ENSIPUG00000001991	-	82	60.938	ENSSPAG00000018518	-	56	62.360	Stegastes_partitus
ENSIPUG00000001991	-	86	56.436	ENSTRUG00000020491	-	56	58.989	Takifugu_rubripes
ENSIPUG00000001991	-	79	82.796	ENSTNIG00000007398	-	69	82.873	Tetraodon_nigroviridis
ENSIPUG00000001991	-	77	62.570	ENSXCOG00000009001	-	78	62.712	Xiphophorus_couchianus
ENSIPUG00000001991	-	80	61.780	ENSXMAG00000008076	-	53	62.712	Xiphophorus_maculatus