EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002022 (Gene tree)
Gene ID: 108258631
Gene Symbol: -
Alias: -
Full Name: interferon-induced GTP-binding protein Mx1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 14735 bases
Position: chr26:1081991-1096725
Accession: 108258631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000005308	MMR_HSR1	PF01926.23	2.1e-07	1	1
ENSIPUP00000005083	MMR_HSR1	PF01926.23	7.8e-07	1	1
ENSIPUP00000005118	MMR_HSR1	PF01926.23	8e-07	1	1
ENSIPUP00000005340	MMR_HSR1	PF01926.23	8.3e-07	1	1
ENSIPUP00000005544	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSIPUP00000005446	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000005788	-	1860	-	ENSIPUP00000005544	619 (aa)	-	-
ENSIPUT00000005341	-	1863	XM_017457391	ENSIPUP00000005118	620 (aa)	XP_017312880	-
ENSIPUT00000005306	-	1878	-	ENSIPUP00000005083	625 (aa)	-	-
ENSIPUT00000005545	-	1704	-	ENSIPUP00000005308	567 (aa)	-	-
ENSIPUT00000005575	-	1866	XM_017457393	ENSIPUP00000005340	621 (aa)	XP_017312882	-
ENSIPUT00000005687	-	1827	-	ENSIPUP00000005446	608 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000002022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002022	-	99	87.159	ENSIPUG00000017098	-	99	87.159
ENSIPUG00000002022	-	99	86.817	ENSIPUG00000017075	-	99	86.817
ENSIPUG00000002022	-	100	87.942	ENSIPUG00000003930	-	100	87.942
ENSIPUG00000002022	-	65	32.464	ENSIPUG00000006021	dnm1l	59	32.464
ENSIPUG00000002022	-	75	31.798	ENSIPUG00000007113	si:dkey-32e23.4	66	31.798
ENSIPUG00000002022	-	99	70.579	ENSIPUG00000004815	-	99	70.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002022	-	99	56.982	ENSAPOG00000009473	mxb	96	56.982	Acanthochromis_polyacanthus
ENSIPUG00000002022	-	99	60.674	ENSACIG00000007486	mxa	99	60.863	Amphilophus_citrinellus
ENSIPUG00000002022	-	99	56.844	ENSAOCG00000000359	mxb	91	56.981	Amphiprion_ocellaris
ENSIPUG00000002022	-	99	54.649	ENSAPEG00000001712	mxb	96	54.649	Amphiprion_percula
ENSIPUG00000002022	-	99	46.916	ENSDARG00000014427	mxe	96	47.154	Danio_rerio
ENSIPUG00000002022	-	99	45.469	ENSDARG00000024789	mxc	96	45.469	Danio_rerio
ENSIPUG00000002022	-	99	56.613	ENSFHEG00000004383	mxb	97	56.613	Fundulus_heteroclitus
ENSIPUG00000002022	-	99	44.462	ENSGALG00000016142	MX1	92	44.427	Gallus_gallus
ENSIPUG00000002022	-	99	60.161	ENSHBUG00000006779	-	99	60.161	Haplochromis_burtoni
ENSIPUG00000002022	-	97	61.148	ENSLBEG00000025587	mxa	98	61.248	Labrus_bergylta
ENSIPUG00000002022	-	99	51.942	ENSMAMG00000019747	-	96	51.858	Mastacembelus_armatus
ENSIPUG00000002022	-	99	60.680	ENSMZEG00005012013	-	99	60.680	Maylandia_zebra
ENSIPUG00000002022	-	99	44.695	ENSMGAG00000014565	-	87	44.695	Meleagris_gallopavo
ENSIPUG00000002022	-	99	57.987	ENSNBRG00000020639	-	99	57.987	Neolamprologus_brichardi
ENSIPUG00000002022	-	100	58.786	ENSPMGG00000001118	mxa	100	58.824	Periophthalmus_magnuspinnatus
ENSIPUG00000002022	-	98	57.749	ENSPREG00000019545	-	97	57.468	Poecilia_reticulata
ENSIPUG00000002022	-	99	56.634	ENSSPAG00000001106	mxb	96	56.634	Stegastes_partitus