EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002023 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6367 bases
Position: chr21:9528699-9535065
Accession: 108255131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003011	RRM_1	PF00076.22	7.6e-36	1	2
ENSIPUP00000003011	RRM_1	PF00076.22	7.6e-36	2	2
ENSIPUP00000003038	RRM_1	PF00076.22	8.7e-36	1	2
ENSIPUP00000003038	RRM_1	PF00076.22	8.7e-36	2	2
ENSIPUP00000002997	RRM_1	PF00076.22	9e-36	1	2
ENSIPUP00000002997	RRM_1	PF00076.22	9e-36	2	2
ENSIPUP00000003025	RRM_1	PF00076.22	1.4e-35	1	2
ENSIPUP00000003025	RRM_1	PF00076.22	1.4e-35	2	2
ENSIPUP00000002971	RRM_1	PF00076.22	2.2e-35	1	2
ENSIPUP00000002971	RRM_1	PF00076.22	2.2e-35	2	2
ENSIPUP00000002964	RRM_1	PF00076.22	2.4e-35	1	2
ENSIPUP00000002964	RRM_1	PF00076.22	2.4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003168	-	792	-	ENSIPUP00000003011	263 (aa)	-	-
ENSIPUT00000003196	-	792	-	ENSIPUP00000003038	263 (aa)	-	-
ENSIPUT00000003182	-	741	-	ENSIPUP00000003025	246 (aa)	-	-
ENSIPUT00000003127	-	1095	XM_017450837	ENSIPUP00000002971	364 (aa)	XP_017306326	-
ENSIPUT00000003120	-	1101	-	ENSIPUP00000002964	366 (aa)	-	-
ENSIPUT00000003154	-	831	-	ENSIPUP00000002997	276 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000002023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002023	hnrnpa1a	75	78.889	ENSIPUG00000022432	hnrnpa1b	66	80.000
ENSIPUG00000002023	hnrnpa1a	75	79.444	ENSIPUG00000022440	-	75	79.310
ENSIPUG00000002023	hnrnpa1a	83	34.934	ENSIPUG00000024954	hnrnpd	72	35.088
ENSIPUG00000002023	hnrnpa1a	69	38.202	ENSIPUG00000024951	hnrnpdl	63	37.500
ENSIPUG00000002023	hnrnpa1a	87	36.842	ENSIPUG00000001976	msi1	55	39.855
ENSIPUG00000002023	hnrnpa1a	69	44.068	ENSIPUG00000003732	msi2b	55	46.154
ENSIPUG00000002023	hnrnpa1a	83	66.029	ENSIPUG00000019815	RO32	90	64.151
ENSIPUG00000002023	hnrnpa1a	71	40.000	ENSIPUG00000021097	msi2a	59	43.919
ENSIPUG00000002023	hnrnpa1a	78	32.432	ENSIPUG00000004992	tardbp	55	30.058
ENSIPUG00000002023	hnrnpa1a	64	40.764	ENSIPUG00000018218	HNRNPAB	59	39.326
ENSIPUG00000002023	hnrnpa1a	79	57.714	ENSIPUG00000001991	-	77	58.553
ENSIPUG00000002023	hnrnpa1a	75	39.130	ENSIPUG00000006899	dazap1	55	44.776
ENSIPUG00000002023	hnrnpa1a	65	41.176	ENSIPUG00000020220	hnrnpab	75	37.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002023	hnrnpa1a	75	83.889	ENSAPOG00000019369	-	61	81.095	Acanthochromis_polyacanthus
ENSIPUG00000002023	hnrnpa1a	69	52.273	ENSACIG00000021815	-	94	50.262	Amphilophus_citrinellus
ENSIPUG00000002023	hnrnpa1a	75	83.889	ENSAOCG00000005289	-	60	81.095	Amphiprion_ocellaris
ENSIPUG00000002023	hnrnpa1a	75	83.889	ENSAPEG00000004179	-	60	81.095	Amphiprion_percula
ENSIPUG00000002023	hnrnpa1a	75	85.714	ENSATEG00000022918	hnrnpa1a	92	81.633	Anabas_testudineus
ENSIPUG00000002023	hnrnpa1a	75	57.595	ENSATEG00000003423	-	75	57.595	Anabas_testudineus
ENSIPUG00000002023	hnrnpa1a	68	55.866	ENSACAG00000017109	-	67	51.818	Anolis_carolinensis
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSACLG00000006940	-	57	84.409	Astatotilapia_calliptera
ENSIPUG00000002023	hnrnpa1a	76	80.000	ENSAMXG00000006296	hnrnpa1a	58	36.508	Astyanax_mexicanus
ENSIPUG00000002023	hnrnpa1a	76	60.000	ENSAMXG00000037730	-	57	56.186	Astyanax_mexicanus
ENSIPUG00000002023	hnrnpa1a	76	53.179	ENSCSEG00000014051	-	77	52.571	Cynoglossus_semilaevis
ENSIPUG00000002023	hnrnpa1a	76	84.659	ENSCSEG00000007589	hnrnpa1a	70	84.699	Cynoglossus_semilaevis
ENSIPUG00000002023	hnrnpa1a	75	84.831	ENSCVAG00000012637	hnrnpa1a	69	72.961	Cyprinodon_variegatus
ENSIPUG00000002023	hnrnpa1a	72	93.889	ENSDARG00000011020	hnrnpa1a	56	86.574	Danio_rerio
ENSIPUG00000002023	hnrnpa1a	73	54.639	ENSDORG00000026425	-	56	54.359	Dipodomys_ordii
ENSIPUG00000002023	hnrnpa1a	75	88.000	ENSELUG00000007372	-	51	87.432	Esox_lucius
ENSIPUG00000002023	hnrnpa1a	70	83.696	ENSGMOG00000017950	hnrnpa1a	50	83.648	Gadus_morhua
ENSIPUG00000002023	hnrnpa1a	76	58.286	ENSGMOG00000020353	-	98	55.789	Gadus_morhua
ENSIPUG00000002023	hnrnpa1a	89	73.222	ENSGAFG00000007751	-	59	82.090	Gambusia_affinis
ENSIPUG00000002023	hnrnpa1a	68	51.429	ENSGAFG00000016803	-	57	49.206	Gambusia_affinis
ENSIPUG00000002023	hnrnpa1a	76	87.429	ENSGACG00000009435	-	54	86.525	Gasterosteus_aculeatus
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSHBUG00000005647	hnrnpa1a	56	84.865	Haplochromis_burtoni
ENSIPUG00000002023	hnrnpa1a	76	84.831	ENSKMAG00000020859	-	69	72.845	Kryptolebias_marmoratus
ENSIPUG00000002023	hnrnpa1a	75	86.857	ENSLBEG00000010010	hnrnpa1a	57	82.323	Labrus_bergylta
ENSIPUG00000002023	hnrnpa1a	74	68.362	ENSMFAG00000028351	-	59	64.179	Macaca_fascicularis
ENSIPUG00000002023	hnrnpa1a	76	85.000	ENSMAMG00000007606	-	59	82.000	Mastacembelus_armatus
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSMZEG00005027173	hnrnpa1a	57	83.770	Maylandia_zebra
ENSIPUG00000002023	hnrnpa1a	75	85.556	ENSMMOG00000008251	hnrnpa1a	80	84.536	Mola_mola
ENSIPUG00000002023	hnrnpa1a	69	51.705	ENSMALG00000008886	-	90	50.532	Monopterus_albus
ENSIPUG00000002023	hnrnpa1a	76	84.444	ENSMALG00000014091	hnrnpa1a	68	72.650	Monopterus_albus
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSNBRG00000018441	-	56	86.286	Neolamprologus_brichardi
ENSIPUG00000002023	hnrnpa1a	72	57.714	ENSNBRG00000014469	-	88	57.714	Neolamprologus_brichardi
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSORLG00000008001	-	60	83.163	Oryzias_latipes
ENSIPUG00000002023	hnrnpa1a	78	48.020	ENSORLG00000029240	-	99	51.163	Oryzias_latipes
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSORLG00020006582	hnrnpa1a	88	82.540	Oryzias_latipes_hni
ENSIPUG00000002023	hnrnpa1a	78	48.020	ENSORLG00020022498	-	91	50.581	Oryzias_latipes_hni
ENSIPUG00000002023	hnrnpa1a	70	49.180	ENSORLG00020006043	-	66	46.939	Oryzias_latipes_hni
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSORLG00015022294	-	60	83.163	Oryzias_latipes_hsok
ENSIPUG00000002023	hnrnpa1a	76	86.286	ENSOMEG00000015959	-	78	86.667	Oryzias_melastigma
ENSIPUG00000002023	hnrnpa1a	70	55.000	ENSPMGG00000016392	-	93	56.322	Periophthalmus_magnuspinnatus
ENSIPUG00000002023	hnrnpa1a	75	84.868	ENSPMGG00000011804	hnrnpa1a	80	74.211	Periophthalmus_magnuspinnatus
ENSIPUG00000002023	hnrnpa1a	75	85.000	ENSPFOG00000001825	-	59	82.090	Poecilia_formosa
ENSIPUG00000002023	hnrnpa1a	75	85.000	ENSPMEG00000002425	-	59	82.090	Poecilia_mexicana
ENSIPUG00000002023	hnrnpa1a	72	57.714	ENSPNYG00000020729	-	96	57.714	Pundamilia_nyererei
ENSIPUG00000002023	hnrnpa1a	75	94.444	ENSPNAG00000007752	hnrnpa1a	78	92.821	Pygocentrus_nattereri
ENSIPUG00000002023	hnrnpa1a	75	79.330	ENSPNAG00000021630	-	70	68.722	Pygocentrus_nattereri
ENSIPUG00000002023	hnrnpa1a	75	85.143	ENSSMAG00000004641	hnrnpa1a	60	84.699	Scophthalmus_maximus
ENSIPUG00000002023	hnrnpa1a	76	49.246	ENSSMAG00000010246	-	82	50.820	Scophthalmus_maximus
ENSIPUG00000002023	hnrnpa1a	75	56.970	ENSSMAG00000010279	-	93	57.516	Scophthalmus_maximus
ENSIPUG00000002023	hnrnpa1a	85	87.500	ENSSDUG00000013908	hnrnpa1a	87	83.511	Seriola_dumerili
ENSIPUG00000002023	hnrnpa1a	75	56.667	ENSSDUG00000002431	-	82	58.382	Seriola_dumerili
ENSIPUG00000002023	hnrnpa1a	75	88.235	ENSSLDG00000003718	hnrnpa1a	80	87.943	Seriola_lalandi_dorsalis
ENSIPUG00000002023	hnrnpa1a	85	75.893	ENSSPAG00000018518	-	63	83.333	Stegastes_partitus
ENSIPUG00000002023	hnrnpa1a	76	84.571	ENSTRUG00000020491	-	58	85.000	Takifugu_rubripes
ENSIPUG00000002023	hnrnpa1a	75	56.571	ENSTNIG00000007398	-	79	56.863	Tetraodon_nigroviridis
ENSIPUG00000002023	hnrnpa1a	75	87.500	ENSXCOG00000009001	-	87	82.090	Xiphophorus_couchianus
ENSIPUG00000002023	hnrnpa1a	75	85.000	ENSXMAG00000008076	-	59	82.090	Xiphophorus_maculatus