EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000002088 (Gene tree)
Gene ID
108272177
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin-1-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
10250 bases
Position
chr1:5951323-5961572
Accession
108272177
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000002914AXHPF08517.121.2e-4111
ENSIPUP00000002917AXHPF08517.121.2e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000003066-2771XM_017480448ENSIPUP00000002914823 (aa)XP_017335937A0A2D0S0F0
ENSIPUT00000003069-3433XM_017480432ENSIPUP00000002917823 (aa)XP_017335921A0A2D0S0F0
Gene Model
Click here to download ENSIPUG00000002088's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002088's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000002088atxn1b9940.000ENSIPUG00000001402atxn19939.653
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000002088atxn1b9338.080ENSG00000124788ATXN19934.254Homo_sapiens
ENSIPUG00000002088atxn1b10043.144ENSAPOG00000005003atxn1b9943.464Acanthochromis_polyacanthus
ENSIPUG00000002088atxn1b9939.485ENSAPOG00000018662atxn1a9939.310Acanthochromis_polyacanthus
ENSIPUG00000002088atxn1b9934.671ENSAMEG00000004299ATXN19935.340Ailuropoda_melanoleuca
ENSIPUG00000002088atxn1b8640.080ENSACIG00000016088atxn1a9937.471Amphilophus_citrinellus
ENSIPUG00000002088atxn1b10041.392ENSACIG00000014661atxn1b9941.529Amphilophus_citrinellus
ENSIPUG00000002088atxn1b9938.384ENSAOCG00000015796atxn1a9939.441Amphiprion_ocellaris
ENSIPUG00000002088atxn1b10042.346ENSAOCG00000019715atxn1b9942.777Amphiprion_ocellaris
ENSIPUG00000002088atxn1b9938.565ENSAPEG00000011313atxn1a9939.665Amphiprion_percula
ENSIPUG00000002088atxn1b10042.649ENSAPEG00000022436atxn1b9943.032Amphiprion_percula
ENSIPUG00000002088atxn1b9939.842ENSATEG00000013601atxn1a9939.683Anabas_testudineus
ENSIPUG00000002088atxn1b10043.695ENSATEG00000002982atxn1b9944.009Anabas_testudineus
ENSIPUG00000002088atxn1b9934.855ENSACAG00000003919ATXN19934.967Anolis_carolinensis
ENSIPUG00000002088atxn1b8130.374ENSANAG00000025424-9630.812Aotus_nancymaae
ENSIPUG00000002088atxn1b9934.116ENSANAG00000025206-9534.792Aotus_nancymaae
ENSIPUG00000002088atxn1b10040.929ENSACLG00000005697atxn1b9941.436Astatotilapia_calliptera
ENSIPUG00000002088atxn1b9938.546ENSACLG00000015429atxn1a9939.391Astatotilapia_calliptera
ENSIPUG00000002088atxn1b9974.496ENSAMXG00000017432atxn1b9875.326Astyanax_mexicanus
ENSIPUG00000002088atxn1b9938.444ENSAMXG00000042368atxn1a9939.631Astyanax_mexicanus
ENSIPUG00000002088atxn1b9935.347ENSBTAG00000019675ATXN19935.153Bos_taurus
ENSIPUG00000002088atxn1b9934.225ENSCJAG00000006563ATXN19434.989Callithrix_jacchus
ENSIPUG00000002088atxn1b9935.221ENSCAFG00000009934ATXN19935.674Canis_familiaris
ENSIPUG00000002088atxn1b9935.254ENSCAFG00020012647ATXN19535.520Canis_lupus_dingo
ENSIPUG00000002088atxn1b9935.386ENSCHIG00000018697ATXN19936.154Capra_hircus
ENSIPUG00000002088atxn1b9934.816ENSCAPG00000013095ATXN19935.039Cavia_aperea
ENSIPUG00000002088atxn1b9935.017ENSCPOG00000022869ATXN19935.466Cavia_porcellus
ENSIPUG00000002088atxn1b9934.413ENSCCAG00000018590ATXN19934.972Cebus_capucinus
ENSIPUG00000002088atxn1b9934.487ENSCATG00000042777ATXN19934.938Cercocebus_atys
ENSIPUG00000002088atxn1b9935.135ENSCLAG00000002212ATXN19935.360Chinchilla_lanigera
ENSIPUG00000002088atxn1b9934.228ENSCSAG00000007589ATXN19934.905Chlorocebus_sabaeus
ENSIPUG00000002088atxn1b9935.561ENSCPBG00000022373ATXN19936.508Chrysemys_picta_bellii
ENSIPUG00000002088atxn1b9934.719ENSCANG00000033673ATXN19935.287Colobus_angolensis_palliatus
ENSIPUG00000002088atxn1b9934.602ENSCGRG00001022108Atxn19934.753Cricetulus_griseus_chok1gshd
ENSIPUG00000002088atxn1b9934.955ENSCGRG00000014084Atxn19935.068Cricetulus_griseus_crigri
ENSIPUG00000002088atxn1b10042.582ENSCSEG00000004666atxn1b9942.955Cynoglossus_semilaevis
ENSIPUG00000002088atxn1b9936.678ENSCSEG00000017647atxn1a9937.755Cynoglossus_semilaevis
ENSIPUG00000002088atxn1b9939.220ENSCVAG00000023240atxn1a9938.991Cyprinodon_variegatus
ENSIPUG00000002088atxn1b10042.333ENSCVAG00000010945atxn1b9942.508Cyprinodon_variegatus
ENSIPUG00000002088atxn1b9959.620ENSDARG00000060862atxn1b9959.264Danio_rerio
ENSIPUG00000002088atxn1b9939.795ENSDARG00000061687atxn1a9941.332Danio_rerio
ENSIPUG00000002088atxn1b5642.706ENSDNOG00000048471ATXN16045.023Dasypus_novemcinctus
ENSIPUG00000002088atxn1b9934.787ENSDORG00000005940Atxn19935.301Dipodomys_ordii
ENSIPUG00000002088atxn1b8246.369ENSETEG00000003815ATXN18648.128Echinops_telfairi
ENSIPUG00000002088atxn1b9935.714ENSEASG00005011799ATXN19936.323Equus_asinus_asinus
ENSIPUG00000002088atxn1b9935.754ENSECAG00000009251ATXN19936.435Equus_caballus
ENSIPUG00000002088atxn1b9935.006ENSEEUG00000007120ATXN19935.340Erinaceus_europaeus
ENSIPUG00000002088atxn1b9937.920ENSELUG00000003691atxn1a9637.283Esox_lucius
ENSIPUG00000002088atxn1b9065.957ENSELUG00000001311atxn1b7165.957Esox_lucius
ENSIPUG00000002088atxn1b9934.529ENSFCAG00000011298ATXN19935.593Felis_catus
ENSIPUG00000002088atxn1b9936.457ENSFALG00000013400ATXN19936.800Ficedula_albicollis
ENSIPUG00000002088atxn1b8343.304ENSFDAG00000020905ATXN19744.196Fukomys_damarensis
ENSIPUG00000002088atxn1b9942.969ENSFHEG00000017226atxn1b9943.337Fundulus_heteroclitus
ENSIPUG00000002088atxn1b9937.783ENSFHEG00000019419atxn1a9937.430Fundulus_heteroclitus
ENSIPUG00000002088atxn1b10040.023ENSGMOG00000013508atxn1b10040.023Gadus_morhua
ENSIPUG00000002088atxn1b9935.488ENSGALG00000012709ATXN19935.601Gallus_gallus
ENSIPUG00000002088atxn1b8640.000ENSGAFG00000010544atxn1a9938.143Gambusia_affinis
ENSIPUG00000002088atxn1b9941.676ENSGAFG00000007295atxn1b9943.924Gambusia_affinis
ENSIPUG00000002088atxn1b10043.897ENSGACG00000008747atxn1b10043.427Gasterosteus_aculeatus
ENSIPUG00000002088atxn1b9937.020ENSGACG00000003472atxn1a9936.806Gasterosteus_aculeatus
ENSIPUG00000002088atxn1b9935.561ENSGAGG00000006868ATXN19936.095Gopherus_agassizii
ENSIPUG00000002088atxn1b9933.556ENSGGOG00000004169ATXN19934.448Gorilla_gorilla
ENSIPUG00000002088atxn1b9938.326ENSHBUG00000002508atxn1a9939.052Haplochromis_burtoni
ENSIPUG00000002088atxn1b10040.929ENSHBUG00000016081atxn1b9941.436Haplochromis_burtoni
ENSIPUG00000002088atxn1b9935.779ENSHGLG00000009360ATXN19936.005Heterocephalus_glaber_female
ENSIPUG00000002088atxn1b9935.440ENSHGLG00100003038ATXN19935.892Heterocephalus_glaber_male
ENSIPUG00000002088atxn1b9935.322ENSHCOG00000019032atxn1a9934.677Hippocampus_comes
ENSIPUG00000002088atxn1b9943.051ENSHCOG00000014835atxn1b9943.560Hippocampus_comes
ENSIPUG00000002088atxn1b9935.108ENSSTOG00000025423ATXN19935.561Ictidomys_tridecemlineatus
ENSIPUG00000002088atxn1b9935.200ENSJJAG00000000377Atxn19935.074Jaculus_jaculus
ENSIPUG00000002088atxn1b9936.077ENSKMAG00000007216atxn1a9937.332Kryptolebias_marmoratus
ENSIPUG00000002088atxn1b10042.053ENSKMAG00000013507atxn1b9943.128Kryptolebias_marmoratus
ENSIPUG00000002088atxn1b9939.294ENSLBEG00000024388atxn1a9939.522Labrus_bergylta
ENSIPUG00000002088atxn1b9943.632ENSLBEG00000024264atxn1b9943.834Labrus_bergylta
ENSIPUG00000002088atxn1b9938.462ENSLACG00000005371ATXN19937.745Latimeria_chalumnae
ENSIPUG00000002088atxn1b9158.333ENSLOCG00000002910atxn1a8958.333Lepisosteus_oculatus
ENSIPUG00000002088atxn1b9935.000ENSLAFG00000015231ATXN19935.414Loxodonta_africana
ENSIPUG00000002088atxn1b9934.076ENSMFAG00000032779ATXN19934.749Macaca_fascicularis
ENSIPUG00000002088atxn1b9934.076ENSMMUG00000002940ATXN19934.749Macaca_mulatta
ENSIPUG00000002088atxn1b9934.487ENSMNEG00000036667ATXN19934.938Macaca_nemestrina
ENSIPUG00000002088atxn1b7338.080ENSMLEG00000040480ATXN18538.193Mandrillus_leucophaeus
ENSIPUG00000002088atxn1b10043.249ENSMAMG00000011503atxn1b9942.920Mastacembelus_armatus
ENSIPUG00000002088atxn1b9937.823ENSMAMG00000014004atxn1a9938.914Mastacembelus_armatus
ENSIPUG00000002088atxn1b10041.040ENSMZEG00005015064atxn1b9941.215Maylandia_zebra
ENSIPUG00000002088atxn1b9938.546ENSMZEG00005003602atxn1a9939.391Maylandia_zebra
ENSIPUG00000002088atxn1b9935.034ENSMGAG00000003028ATXN19934.921Meleagris_gallopavo
ENSIPUG00000002088atxn1b9935.561ENSMAUG00000011491Atxn19935.633Mesocricetus_auratus
ENSIPUG00000002088atxn1b9935.135ENSMICG00000011875ATXN19934.983Microcebus_murinus
ENSIPUG00000002088atxn1b9934.655ENSMOCG00000001527Atxn19934.710Microtus_ochrogaster
ENSIPUG00000002088atxn1b9938.769ENSMMOG00000018593atxn1a9939.657Mola_mola
ENSIPUG00000002088atxn1b10042.571ENSMMOG00000002884atxn1b9952.308Mola_mola
ENSIPUG00000002088atxn1b9936.607ENSMODG00000010827ATXN19936.384Monodelphis_domestica
ENSIPUG00000002088atxn1b9938.644ENSMALG00000005209atxn1a9939.057Monopterus_albus
ENSIPUG00000002088atxn1b10042.525ENSMALG00000012137atxn1b9943.142Monopterus_albus
ENSIPUG00000002088atxn1b9935.819MGP_CAROLIEiJ_G0018479Atxn19935.141Mus_caroli
ENSIPUG00000002088atxn1b9935.706ENSMUSG00000046876Atxn19935.028Mus_musculus
ENSIPUG00000002088atxn1b9935.860MGP_PahariEiJ_G0019546Atxn19935.181Mus_pahari
ENSIPUG00000002088atxn1b9935.819MGP_SPRETEiJ_G0019357Atxn19935.141Mus_spretus
ENSIPUG00000002088atxn1b9935.794ENSMPUG00000005398ATXN19936.045Mustela_putorius_furo
ENSIPUG00000002088atxn1b9935.360ENSMLUG00000000896ATXN19934.797Myotis_lucifugus
ENSIPUG00000002088atxn1b9934.541ENSNGAG00000020481Atxn19935.141Nannospalax_galili
ENSIPUG00000002088atxn1b9938.852ENSNBRG00000013216atxn1a9939.593Neolamprologus_brichardi
ENSIPUG00000002088atxn1b10041.549ENSNBRG00000014776atxn1b9942.204Neolamprologus_brichardi
ENSIPUG00000002088atxn1b9934.263ENSNLEG00000001064ATXN19934.714Nomascus_leucogenys
ENSIPUG00000002088atxn1b9935.181ENSMEUG00000014680ATXN19634.955Notamacropus_eugenii
ENSIPUG00000002088atxn1b9933.296ENSOPRG00000004813ATXN19934.905Ochotona_princeps
ENSIPUG00000002088atxn1b9935.183ENSODEG00000006297ATXN19935.255Octodon_degus
ENSIPUG00000002088atxn1b10043.310ENSONIG00000003094atxn1b10043.845Oreochromis_niloticus
ENSIPUG00000002088atxn1b9934.641ENSOCUG00000015360ATXN19934.938Oryctolagus_cuniculus
ENSIPUG00000002088atxn1b9939.543ENSORLG00000013003atxn1a9939.061Oryzias_latipes
ENSIPUG00000002088atxn1b10042.572ENSORLG00000008288atxn1b9942.778Oryzias_latipes
ENSIPUG00000002088atxn1b10042.562ENSORLG00020013514atxn1b9942.982Oryzias_latipes_hni
ENSIPUG00000002088atxn1b9938.977ENSORLG00020006722atxn1a9938.155Oryzias_latipes_hni
ENSIPUG00000002088atxn1b9939.425ENSORLG00015014668atxn1a9938.825Oryzias_latipes_hsok
ENSIPUG00000002088atxn1b10042.730ENSORLG00015019876atxn1b9943.080Oryzias_latipes_hsok
ENSIPUG00000002088atxn1b10043.315ENSOMEG00000003259atxn1b9943.522Oryzias_melastigma
ENSIPUG00000002088atxn1b9937.615ENSOMEG00000012883atxn1a9838.514Oryzias_melastigma
ENSIPUG00000002088atxn1b9935.706ENSOGAG00000028623ATXN110035.102Otolemur_garnettii
ENSIPUG00000002088atxn1b7655.556ENSOARG00000012141ATXN19935.465Ovis_aries
ENSIPUG00000002088atxn1b9338.080ENSPPAG00000028993ATXN19934.368Pan_paniscus
ENSIPUG00000002088atxn1b9937.821ENSPPRG00000004547ATXN19438.560Panthera_pardus
ENSIPUG00000002088atxn1b9934.487ENSPANG00000024249ATXN19934.826Papio_anubis
ENSIPUG00000002088atxn1b9940.278ENSPKIG00000003054atxn1a9940.394Paramormyrops_kingsleyae
ENSIPUG00000002088atxn1b9940.878ENSPKIG00000018323atxn1b9942.040Paramormyrops_kingsleyae
ENSIPUG00000002088atxn1b7832.587ENSPSIG00000007158ATXN19233.286Pelodiscus_sinensis
ENSIPUG00000002088atxn1b7339.280ENSPMGG00000022926atxn1a7239.088Periophthalmus_magnuspinnatus
ENSIPUG00000002088atxn1b9934.797ENSPEMG00000014930Atxn19934.667Peromyscus_maniculatus_bairdii
ENSIPUG00000002088atxn1b9936.323ENSPCIG00000019413ATXN19936.170Phascolarctos_cinereus
ENSIPUG00000002088atxn1b8639.844ENSPFOG00000014422atxn1a9938.288Poecilia_formosa
ENSIPUG00000002088atxn1b8639.674ENSPLAG00000018978atxn1a9938.068Poecilia_latipinna
ENSIPUG00000002088atxn1b9942.431ENSPLAG00000018703atxn1b9943.757Poecilia_latipinna
ENSIPUG00000002088atxn1b9942.333ENSPMEG00000023723atxn1b9944.094Poecilia_mexicana
ENSIPUG00000002088atxn1b9938.176ENSPMEG00000002647atxn1a9938.288Poecilia_mexicana
ENSIPUG00000002088atxn1b9942.521ENSPREG00000020308atxn1b9943.862Poecilia_reticulata
ENSIPUG00000002088atxn1b9937.444ENSPREG00000008333atxn1a9938.229Poecilia_reticulata
ENSIPUG00000002088atxn1b6450.617ENSPCAG00000008196ATXN15950.617Procavia_capensis
ENSIPUG00000002088atxn1b9935.473ENSPCOG00000013612ATXN19935.321Propithecus_coquereli
ENSIPUG00000002088atxn1b8239.615ENSPVAG00000016937ATXN17340.385Pteropus_vampyrus
ENSIPUG00000002088atxn1b10041.315ENSPNYG00000017095atxn1b9941.686Pundamilia_nyererei
ENSIPUG00000002088atxn1b9938.656ENSPNYG00000011920atxn1a9939.391Pundamilia_nyererei
ENSIPUG00000002088atxn1b9939.840ENSPNAG00000010587atxn1a9940.297Pygocentrus_nattereri
ENSIPUG00000002088atxn1b10077.818ENSPNAG00000001226atxn1b10078.909Pygocentrus_nattereri
ENSIPUG00000002088atxn1b9935.666ENSRNOG00000016998Atxn19934.967Rattus_norvegicus
ENSIPUG00000002088atxn1b9933.960ENSRBIG00000028213ATXN19934.406Rhinopithecus_bieti
ENSIPUG00000002088atxn1b9934.372ENSRROG00000032751ATXN19934.821Rhinopithecus_roxellana
ENSIPUG00000002088atxn1b9934.298ENSSBOG00000017381-9934.749Saimiri_boliviensis_boliviensis
ENSIPUG00000002088atxn1b9943.021ENSSFOG00015000179atxn1b9943.736Scleropages_formosus
ENSIPUG00000002088atxn1b9941.509ENSSFOG00015005189atxn19942.267Scleropages_formosus
ENSIPUG00000002088atxn1b9937.813ENSSMAG00000007731atxn1a9438.983Scophthalmus_maximus
ENSIPUG00000002088atxn1b10042.576ENSSMAG00000019621atxn1b9943.938Scophthalmus_maximus
ENSIPUG00000002088atxn1b10041.501ENSSDUG00000006990atxn1b9942.968Seriola_dumerili
ENSIPUG00000002088atxn1b9939.302ENSSDUG00000011376atxn1a9939.506Seriola_dumerili
ENSIPUG00000002088atxn1b10042.239ENSSLDG00000016306atxn1b9942.668Seriola_lalandi_dorsalis
ENSIPUG00000002088atxn1b9939.057ENSSLDG00000013505atxn1a9939.394Seriola_lalandi_dorsalis
ENSIPUG00000002088atxn1b9935.964ENSSPUG00000016650ATXN19936.117Sphenodon_punctatus
ENSIPUG00000002088atxn1b9938.634ENSSPAG00000019849atxn1a9939.242Stegastes_partitus
ENSIPUG00000002088atxn1b10045.165ENSSPAG00000003388atxn1b9945.283Stegastes_partitus
ENSIPUG00000002088atxn1b9935.730ENSSSCG00000001065ATXN19936.504Sus_scrofa
ENSIPUG00000002088atxn1b9934.868ENSTGUG00000005986ATXN19935.098Taeniopygia_guttata
ENSIPUG00000002088atxn1b10040.646ENSTRUG00000024789atxn1b9941.356Takifugu_rubripes
ENSIPUG00000002088atxn1b7040.527ENSTRUG00000014645atxn1a9938.286Takifugu_rubripes
ENSIPUG00000002088atxn1b9937.616ENSTNIG00000005089atxn1a9939.125Tetraodon_nigroviridis
ENSIPUG00000002088atxn1b9942.556ENSTNIG00000018398atxn1b9942.506Tetraodon_nigroviridis
ENSIPUG00000002088atxn1b9935.811ENSTTRG00000014678ATXN19636.149Tursiops_truncatus
ENSIPUG00000002088atxn1b9934.155ENSUAMG00000004064ATXN19934.831Ursus_americanus
ENSIPUG00000002088atxn1b5640.326ENSUMAG00000017635-9240.580Ursus_maritimus
ENSIPUG00000002088atxn1b9935.327ENSVVUG00000003386ATXN19935.593Vulpes_vulpes
ENSIPUG00000002088atxn1b9935.851ENSXETG00000014184atxn19936.077Xenopus_tropicalis
ENSIPUG00000002088atxn1b9942.124ENSXCOG00000019714atxn1b9843.059Xiphophorus_couchianus
ENSIPUG00000002088atxn1b9938.506ENSXCOG00000020061atxn1a9939.261Xiphophorus_couchianus
ENSIPUG00000002088atxn1b9941.776ENSXMAG00000014270atxn1b9943.862Xiphophorus_maculatus
ENSIPUG00000002088atxn1b8638.889ENSXMAG00000003615atxn1a9938.652Xiphophorus_maculatus

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