EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000002090 (Gene tree)
Gene ID: 108276782
Gene Symbol: wrn
Alias: -
Full Name: Werner syndrome RecQ like helicase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 40376 bases
Position: chr16:8478281-8518656
Accession: 108276782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000002963	HRDC	PF00570.23	8.9e-10	1	1
ENSIPUP00000002941	HRDC	PF00570.23	9.1e-10	1	1
ENSIPUP00000002921	HRDC	PF00570.23	9.4e-10	1	1
ENSIPUP00000002963	DEAD	PF00270.29	7.5e-16	1	1
ENSIPUP00000002941	DEAD	PF00270.29	8.5e-16	1	1
ENSIPUP00000002921	DEAD	PF00270.29	8.5e-16	1	1
ENSIPUP00000002963	DNA_pol_A_exo1	PF01612.20	7.8e-27	1	1
ENSIPUP00000002941	DNA_pol_A_exo1	PF01612.20	7.9e-27	1	1
ENSIPUP00000002921	DNA_pol_A_exo1	PF01612.20	8.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003119	-	4719	XM_017488734	ENSIPUP00000002963	1381 (aa)	XP_017344223	A0A2D0SNE1
ENSIPUT00000003075	-	5389	XM_017488731	ENSIPUP00000002921	1429 (aa)	XP_017344220	A0A2D0SPL4
ENSIPUT00000003097	-	5254	XM_017488732	ENSIPUP00000002941	1384 (aa)	XP_017344221	A0A2D0SP03

Gene Model

Click here to download ENSIPUG00000002090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002090	wrn	92	47.935	ENSG00000165392	WRN	94	47.985	Homo_sapiens
ENSIPUG00000002090	wrn	62	55.312	ENSAMEG00000000475	-	69	56.138	Ailuropoda_melanoleuca
ENSIPUG00000002090	wrn	98	48.478	ENSAPLG00000001616	WRN	98	49.138	Anas_platyrhynchos
ENSIPUG00000002090	wrn	92	45.765	ENSACAG00000003109	WRN	100	45.840	Anolis_carolinensis
ENSIPUG00000002090	wrn	90	48.647	ENSANAG00000032806	WRN	98	48.317	Aotus_nancymaae
ENSIPUG00000002090	wrn	99	71.685	ENSAMXG00000010066	wrn	99	71.843	Astyanax_mexicanus
ENSIPUG00000002090	wrn	99	47.917	ENSBTAG00000021592	WRN	94	49.813	Bos_taurus
ENSIPUG00000002090	wrn	56	33.041	WBGene00006944	wrn-1	72	34.278	Caenorhabditis_elegans
ENSIPUG00000002090	wrn	92	48.352	ENSCJAG00000012511	WRN	94	47.956	Callithrix_jacchus
ENSIPUG00000002090	wrn	97	51.268	ENSCAFG00000006410	WRN	99	49.402	Canis_familiaris
ENSIPUG00000002090	wrn	99	47.303	ENSCAFG00020001236	WRN	94	49.628	Canis_lupus_dingo
ENSIPUG00000002090	wrn	92	49.211	ENSCHIG00000014991	WRN	94	49.104	Capra_hircus
ENSIPUG00000002090	wrn	92	49.210	ENSTSYG00000012689	WRN	94	49.135	Carlito_syrichta
ENSIPUG00000002090	wrn	73	59.144	ENSCAPG00000016803	WRN	88	49.560	Cavia_aperea
ENSIPUG00000002090	wrn	99	46.804	ENSCPOG00000002943	WRN	97	46.749	Cavia_porcellus
ENSIPUG00000002090	wrn	93	47.574	ENSCCAG00000023793	WRN	95	47.437	Cebus_capucinus
ENSIPUG00000002090	wrn	92	49.137	ENSCATG00000040557	WRN	97	48.514	Cercocebus_atys
ENSIPUG00000002090	wrn	98	46.159	ENSCLAG00000000817	WRN	97	46.075	Chinchilla_lanigera
ENSIPUG00000002090	wrn	92	48.200	ENSCSAG00000015810	WRN	97	47.804	Chlorocebus_sabaeus
ENSIPUG00000002090	wrn	54	68.889	ENSCHOG00000008966	WRN	56	68.889	Choloepus_hoffmanni
ENSIPUG00000002090	wrn	99	48.031	ENSCPBG00000013421	WRN	98	48.554	Chrysemys_picta_bellii
ENSIPUG00000002090	wrn	71	37.001	ENSCING00000002232	-	67	42.488	Ciona_intestinalis
ENSIPUG00000002090	wrn	92	47.686	ENSCANG00000037137	WRN	95	47.581	Colobus_angolensis_palliatus
ENSIPUG00000002090	wrn	99	46.132	ENSCGRG00001016491	Wrn	95	47.305	Cricetulus_griseus_chok1gshd
ENSIPUG00000002090	wrn	83	45.029	ENSCGRG00000016821	Wrn	94	46.357	Cricetulus_griseus_crigri
ENSIPUG00000002090	wrn	99	63.040	ENSDARG00000098211	wrn	99	63.040	Danio_rerio
ENSIPUG00000002090	wrn	95	46.390	ENSDNOG00000008481	WRN	99	47.072	Dasypus_novemcinctus
ENSIPUG00000002090	wrn	93	47.513	ENSDORG00000002696	Wrn	98	46.333	Dipodomys_ordii
ENSIPUG00000002090	wrn	65	60.622	ENSETEG00000019854	WRN	64	60.622	Echinops_telfairi
ENSIPUG00000002090	wrn	92	47.504	ENSEASG00005016813	WRN	93	64.264	Equus_asinus_asinus
ENSIPUG00000002090	wrn	99	46.716	ENSECAG00000000110	WRN	97	46.355	Equus_caballus
ENSIPUG00000002090	wrn	63	65.766	ENSEEUG00000004926	WRN	69	65.766	Erinaceus_europaeus
ENSIPUG00000002090	wrn	99	57.344	ENSELUG00000017817	wrn	96	72.947	Esox_lucius
ENSIPUG00000002090	wrn	92	47.594	ENSFCAG00000024759	WRN	94	46.981	Felis_catus
ENSIPUG00000002090	wrn	99	46.164	ENSFDAG00000008637	WRN	97	46.612	Fukomys_damarensis
ENSIPUG00000002090	wrn	99	45.216	ENSGALG00000040909	WRN	96	46.228	Gallus_gallus
ENSIPUG00000002090	wrn	99	49.222	ENSGAGG00000022647	WRN	98	49.277	Gopherus_agassizii
ENSIPUG00000002090	wrn	93	48.250	ENSGGOG00000022154	WRN	95	48.189	Gorilla_gorilla
ENSIPUG00000002090	wrn	92	48.823	ENSHGLG00000003638	WRN	93	50.039	Heterocephalus_glaber_female
ENSIPUG00000002090	wrn	99	46.731	ENSSTOG00000013599	WRN	99	46.785	Ictidomys_tridecemlineatus
ENSIPUG00000002090	wrn	92	47.626	ENSJJAG00000015655	Wrn	94	47.380	Jaculus_jaculus
ENSIPUG00000002090	wrn	99	46.995	ENSLACG00000001569	-	98	47.159	Latimeria_chalumnae
ENSIPUG00000002090	wrn	97	55.954	ENSLOCG00000010792	wrn	99	54.590	Lepisosteus_oculatus
ENSIPUG00000002090	wrn	99	46.792	ENSLAFG00000004434	WRN	94	48.433	Loxodonta_africana
ENSIPUG00000002090	wrn	92	49.059	ENSMFAG00000043428	WRN	95	48.657	Macaca_fascicularis
ENSIPUG00000002090	wrn	92	48.015	ENSMMUG00000022655	WRN	95	47.956	Macaca_mulatta
ENSIPUG00000002090	wrn	92	47.868	ENSMNEG00000032617	WRN	95	47.810	Macaca_nemestrina
ENSIPUG00000002090	wrn	92	48.987	ENSMLEG00000038296	WRN	95	48.586	Mandrillus_leucophaeus
ENSIPUG00000002090	wrn	99	45.467	ENSMGAG00000004960	WRN	96	46.290	Meleagris_gallopavo
ENSIPUG00000002090	wrn	92	47.719	ENSMAUG00000016235	Wrn	95	47.491	Mesocricetus_auratus
ENSIPUG00000002090	wrn	92	47.404	ENSMICG00000010630	WRN	94	46.868	Microcebus_murinus
ENSIPUG00000002090	wrn	99	46.331	ENSMOCG00000013972	Wrn	95	47.726	Microtus_ochrogaster
ENSIPUG00000002090	wrn	99	48.159	ENSMODG00000018997	WRN	94	52.054	Monodelphis_domestica
ENSIPUG00000002090	wrn	99	45.436	MGP_CAROLIEiJ_G0030961	Wrn	95	47.191	Mus_caroli
ENSIPUG00000002090	wrn	99	45.334	ENSMUSG00000031583	Wrn	95	47.041	Mus_musculus
ENSIPUG00000002090	wrn	99	45.461	MGP_PahariEiJ_G0021430	Wrn	95	47.054	Mus_pahari
ENSIPUG00000002090	wrn	92	47.168	MGP_SPRETEiJ_G0032079	Wrn	95	47.168	Mus_spretus
ENSIPUG00000002090	wrn	92	50.152	ENSMPUG00000010201	WRN	94	50.188	Mustela_putorius_furo
ENSIPUG00000002090	wrn	92	50.344	ENSMLUG00000005863	WRN	94	50.076	Myotis_lucifugus
ENSIPUG00000002090	wrn	92	47.046	ENSNGAG00000018413	Wrn	94	47.270	Nannospalax_galili
ENSIPUG00000002090	wrn	92	49.400	ENSNLEG00000012006	WRN	94	49.400	Nomascus_leucogenys
ENSIPUG00000002090	wrn	54	59.709	ENSMEUG00000008271	-	54	59.709	Notamacropus_eugenii
ENSIPUG00000002090	wrn	86	43.800	ENSOPRG00000001480	WRN	87	44.283	Ochotona_princeps
ENSIPUG00000002090	wrn	92	48.190	ENSODEG00000004076	WRN	94	48.190	Octodon_degus
ENSIPUG00000002090	wrn	91	49.040	ENSOANG00000005952	-	98	48.944	Ornithorhynchus_anatinus
ENSIPUG00000002090	wrn	93	49.584	ENSOCUG00000012620	WRN	85	49.584	Oryctolagus_cuniculus
ENSIPUG00000002090	wrn	92	48.554	ENSOGAG00000009600	WRN	97	48.375	Otolemur_garnettii
ENSIPUG00000002090	wrn	92	49.735	ENSOARG00000000163	WRN	94	49.625	Ovis_aries
ENSIPUG00000002090	wrn	92	48.832	ENSPPAG00000036871	WRN	94	48.764	Pan_paniscus
ENSIPUG00000002090	wrn	92	50.264	ENSPPRG00000010928	WRN	94	49.738	Panthera_pardus
ENSIPUG00000002090	wrn	92	50.490	ENSPTIG00000020609	WRN	94	49.963	Panthera_tigris_altaica
ENSIPUG00000002090	wrn	92	48.874	ENSPTRG00000020145	WRN	94	48.806	Pan_troglodytes
ENSIPUG00000002090	wrn	92	47.686	ENSPANG00000018594	WRN	95	47.414	Papio_anubis
ENSIPUG00000002090	wrn	85	76.471	ENSPKIG00000025497	wrn	98	76.471	Paramormyrops_kingsleyae
ENSIPUG00000002090	wrn	99	48.021	ENSPSIG00000013411	WRN	98	48.331	Pelodiscus_sinensis
ENSIPUG00000002090	wrn	99	44.584	ENSPEMG00000020615	Wrn	94	46.455	Peromyscus_maniculatus_bairdii
ENSIPUG00000002090	wrn	92	50.038	ENSPCIG00000020146	WRN	96	51.605	Phascolarctos_cinereus
ENSIPUG00000002090	wrn	93	47.944	ENSPPYG00000018494	WRN	95	48.026	Pongo_abelii
ENSIPUG00000002090	wrn	88	57.429	ENSPCAG00000013763	WRN	80	57.429	Procavia_capensis
ENSIPUG00000002090	wrn	78	47.399	ENSPCOG00000012938	WRN	98	47.399	Propithecus_coquereli
ENSIPUG00000002090	wrn	82	65.217	ENSPVAG00000012909	WRN	86	46.834	Pteropus_vampyrus
ENSIPUG00000002090	wrn	99	72.361	ENSPNAG00000021848	wrn	99	72.222	Pygocentrus_nattereri
ENSIPUG00000002090	wrn	92	46.637	ENSRNOG00000015440	Wrn	95	46.712	Rattus_norvegicus
ENSIPUG00000002090	wrn	92	48.839	ENSRBIG00000031825	WRN	97	48.124	Rhinopithecus_bieti
ENSIPUG00000002090	wrn	92	48.273	ENSRROG00000045381	WRN	95	47.877	Rhinopithecus_roxellana
ENSIPUG00000002090	wrn	92	48.423	ENSSBOG00000027238	WRN	94	48.099	Saimiri_boliviensis_boliviensis
ENSIPUG00000002090	wrn	92	50.830	ENSSHAG00000005577	WRN	95	50.830	Sarcophilus_harrisii
ENSIPUG00000002090	wrn	97	59.033	ENSSFOG00015006123	wrn	97	60.045	Scleropages_formosus
ENSIPUG00000002090	wrn	76	54.585	ENSSARG00000006157	WRN	78	54.585	Sorex_araneus
ENSIPUG00000002090	wrn	98	46.575	ENSSSCG00000015840	WRN	97	48.992	Sus_scrofa
ENSIPUG00000002090	wrn	70	52.326	ENSTGUG00000001765	WRN	100	52.907	Taeniopygia_guttata
ENSIPUG00000002090	wrn	55	55.924	ENSTBEG00000012702	-	54	55.924	Tupaia_belangeri
ENSIPUG00000002090	wrn	92	47.958	ENSUAMG00000021324	WRN	94	48.048	Ursus_americanus
ENSIPUG00000002090	wrn	83	49.120	ENSUMAG00000007159	WRN	97	49.210	Ursus_maritimus
ENSIPUG00000002090	wrn	91	49.673	ENSVPAG00000011004	WRN	88	49.070	Vicugna_pacos
ENSIPUG00000002090	wrn	99	46.984	ENSVVUG00000019867	WRN	98	47.524	Vulpes_vulpes
ENSIPUG00000002090	wrn	93	49.144	ENSXETG00000018302	wrn	99	51.646	Xenopus_tropicalis