EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000002453 (Gene tree)
Gene ID
108267407
Gene Symbol
puf60a
Alias
fc21a05|wu:fc21a05|wu:fi43a08
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
15998 bases
Position
chr7:3952980-3968977
Accession
108267407
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000003491RRM_1PF00076.223.4e-4412
ENSIPUP00000003491RRM_1PF00076.223.4e-4422
ENSIPUP00000003476RRM_1PF00076.223.8e-4412
ENSIPUP00000003476RRM_1PF00076.223.8e-4422
ENSIPUP00000003519RRM_1PF00076.223.8e-4412
ENSIPUP00000003519RRM_1PF00076.223.8e-4422
ENSIPUP00000003513RRM_1PF00076.224e-4412
ENSIPUP00000003513RRM_1PF00076.224e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000003650-3731XM_017471450ENSIPUP00000003476536 (aa)XP_017326939A0A2D0RAQ7
ENSIPUT00000003687-1575-ENSIPUP00000003513524 (aa)--
ENSIPUT00000003665-3674XM_017471452ENSIPUP00000003491517 (aa)XP_017326941A0A2D0RA20
ENSIPUT00000003693-3662-ENSIPUP00000003519536 (aa)-A0A2D0RAQ7
Gene Model
Click here to download ENSIPUG00000002453's gene model file
Pathways
Pathway IDPathway NameSource
ipu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002453's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000002453puf60a6236.275ENSIPUG00000009077u2af27236.275
ENSIPUG00000002453puf60a6037.255ENSIPUG00000009844-8237.255
ENSIPUG00000002453puf60a10077.570ENSIPUG00000004660puf60b10077.210
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000002453puf60a9983.202ENSG00000179950PUF6010082.806Homo_sapiens
ENSIPUG00000002453puf60a9985.941ENSAPOG00000001713puf60b9985.941Acanthochromis_polyacanthus
ENSIPUG00000002453puf60a9980.718ENSAMEG00000006406PUF609280.151Ailuropoda_melanoleuca
ENSIPUG00000002453puf60a9985.029ENSACIG00000021705puf60b10085.221Amphilophus_citrinellus
ENSIPUG00000002453puf60a10077.159ENSACIG00000003263-10077.395Amphilophus_citrinellus
ENSIPUG00000002453puf60a9985.605ENSAOCG00000005395puf60b10085.605Amphiprion_ocellaris
ENSIPUG00000002453puf60a10083.877ENSAOCG00000015558-9883.493Amphiprion_ocellaris
ENSIPUG00000002453puf60a9983.564ENSAPEG00000011923puf60b9983.564Amphiprion_percula
ENSIPUG00000002453puf60a9976.494ENSAPEG00000001836-10077.535Amphiprion_percula
ENSIPUG00000002453puf60a10082.342ENSATEG00000006303-9882.150Anabas_testudineus
ENSIPUG00000002453puf60a9985.029ENSATEG00000001730puf60b9885.221Anabas_testudineus
ENSIPUG00000002453puf60a9982.987ENSAPLG00000010150PUF609982.609Anas_platyrhynchos
ENSIPUG00000002453puf60a9981.767ENSACAG00000001645PUF609681.767Anolis_carolinensis
ENSIPUG00000002453puf60a9982.609ENSANAG00000018626PUF6010082.231Aotus_nancymaae
ENSIPUG00000002453puf60a9985.542ENSACLG00000004462puf60b10085.743Astatotilapia_calliptera
ENSIPUG00000002453puf60a9995.194ENSAMXG00000036570puf60a10095.194Astyanax_mexicanus
ENSIPUG00000002453puf60a9977.362ENSAMXG00000041030puf60b10077.165Astyanax_mexicanus
ENSIPUG00000002453puf60a9982.609ENSBTAG00000037493PUF609882.231Bos_taurus
ENSIPUG00000002453puf60a8348.571WBGene00004389rnp-68951.961Caenorhabditis_elegans
ENSIPUG00000002453puf60a9982.798ENSCJAG00000021485PUF609782.420Callithrix_jacchus
ENSIPUG00000002453puf60a9982.490ENSCAFG00000001400PUF609978.428Canis_familiaris
ENSIPUG00000002453puf60a9982.798ENSCAFG00020018754PUF609782.420Canis_lupus_dingo
ENSIPUG00000002453puf60a9982.609ENSCHIG00000001618PUF608682.231Capra_hircus
ENSIPUG00000002453puf60a9982.798ENSTSYG00000011912PUF6010082.420Carlito_syrichta
ENSIPUG00000002453puf60a9977.861ENSCPOG00000014613PUF609476.834Cavia_porcellus
ENSIPUG00000002453puf60a9982.609ENSCCAG00000007744PUF609782.609Cebus_capucinus
ENSIPUG00000002453puf60a9982.798ENSCATG00000035405PUF609782.420Cercocebus_atys
ENSIPUG00000002453puf60a9982.798ENSCLAG00000009154PUF609382.101Chinchilla_lanigera
ENSIPUG00000002453puf60a9982.798ENSCSAG00000008878PUF6010082.420Chlorocebus_sabaeus
ENSIPUG00000002453puf60a9982.798ENSCPBG00000005595PUF609782.420Chrysemys_picta_bellii
ENSIPUG00000002453puf60a6455.143ENSCING00000002156-8760.127Ciona_intestinalis
ENSIPUG00000002453puf60a9851.859ENSCING00000008436-9550.791Ciona_intestinalis
ENSIPUG00000002453puf60a9754.335ENSCSAVG00000001385-9954.054Ciona_savignyi
ENSIPUG00000002453puf60a9748.907ENSCSAVG00000004765-9751.875Ciona_savignyi
ENSIPUG00000002453puf60a8180.930ENSCANG00000041843PUF6010080.465Colobus_angolensis_palliatus
ENSIPUG00000002453puf60a9982.609ENSCGRG00001017442Puf609381.907Cricetulus_griseus_chok1gshd
ENSIPUG00000002453puf60a9982.609ENSCGRG00000003717Puf609282.231Cricetulus_griseus_crigri
ENSIPUG00000002453puf60a9985.029ENSCSEG00000019887puf60b9185.029Cynoglossus_semilaevis
ENSIPUG00000002453puf60a10076.448ENSCSEG00000014845-9278.516Cynoglossus_semilaevis
ENSIPUG00000002453puf60a9984.318ENSCVAG00000001560-9683.696Cyprinodon_variegatus
ENSIPUG00000002453puf60a9985.743ENSCVAG00000009386puf60b10086.145Cyprinodon_variegatus
ENSIPUG00000002453puf60a10093.161ENSDARG00000032175puf60a10095.359Danio_rerio
ENSIPUG00000002453puf60a10077.341ENSDARG00000001241puf60b10090.870Danio_rerio
ENSIPUG00000002453puf60a9868.462ENSDNOG00000043278PUF609068.077Dasypus_novemcinctus
ENSIPUG00000002453puf60a9982.609ENSDORG00000004585Puf609581.907Dipodomys_ordii
ENSIPUG00000002453puf60a8760.518FBgn0028577hfp7960.000Drosophila_melanogaster
ENSIPUG00000002453puf60a9766.408ENSEBUG00000005470-9465.730Eptatretus_burgeri
ENSIPUG00000002453puf60a9957.763ENSEBUG00000014291puf60b8461.498Eptatretus_burgeri
ENSIPUG00000002453puf60a9982.798ENSEASG00005009695PUF609782.420Equus_asinus_asinus
ENSIPUG00000002453puf60a9982.798ENSECAG00000024681PUF609682.420Equus_caballus
ENSIPUG00000002453puf60a10089.905ENSELUG00000018443-10090.239Esox_lucius
ENSIPUG00000002453puf60a10083.302ENSELUG00000006507puf60b10081.522Esox_lucius
ENSIPUG00000002453puf60a9982.420ENSFCAG00000001045PUF6010082.042Felis_catus
ENSIPUG00000002453puf60a9973.346ENSFALG00000001136PUF609773.346Ficedula_albicollis
ENSIPUG00000002453puf60a9982.609ENSFDAG00000017177PUF609381.907Fukomys_damarensis
ENSIPUG00000002453puf60a9985.141ENSFHEG00000020046puf60b10085.542Fundulus_heteroclitus
ENSIPUG00000002453puf60a9980.249ENSFHEG00000021687PUF6010082.582Fundulus_heteroclitus
ENSIPUG00000002453puf60a9971.456ENSGMOG00000006392puf60b10071.063Gadus_morhua
ENSIPUG00000002453puf60a6685.755ENSGALG00000039901PUF609585.470Gallus_gallus
ENSIPUG00000002453puf60a9984.645ENSGAFG00000021040puf60b10085.029Gambusia_affinis
ENSIPUG00000002453puf60a10080.460ENSGAFG00000004334-10080.522Gambusia_affinis
ENSIPUG00000002453puf60a9973.704ENSGACG00000004717puf60b9773.704Gasterosteus_aculeatus
ENSIPUG00000002453puf60a10070.913ENSGACG00000001484-10070.962Gasterosteus_aculeatus
ENSIPUG00000002453puf60a9982.798ENSGAGG00000013289PUF609282.031Gopherus_agassizii
ENSIPUG00000002453puf60a9982.798ENSGGOG00000004646PUF609782.420Gorilla_gorilla
ENSIPUG00000002453puf60a9985.542ENSHBUG00000015118puf60b10085.743Haplochromis_burtoni
ENSIPUG00000002453puf60a10082.534ENSHBUG00000009634-10083.669Haplochromis_burtoni
ENSIPUG00000002453puf60a9982.609ENSHGLG00000006111PUF609381.907Heterocephalus_glaber_female
ENSIPUG00000002453puf60a9982.609ENSHGLG00100012362PUF609381.907Heterocephalus_glaber_male
ENSIPUG00000002453puf60a9869.094ENSHCOG00000000378-9966.478Hippocampus_comes
ENSIPUG00000002453puf60a9983.057ENSHCOG00000015541puf60b10083.559Hippocampus_comes
ENSIPUG00000002453puf60a9982.798ENSSTOG00000025037PUF609976.335Ictidomys_tridecemlineatus
ENSIPUG00000002453puf60a9982.609ENSJJAG00000001076Puf609381.907Jaculus_jaculus
ENSIPUG00000002453puf60a9979.317ENSKMAG00000010106-10079.317Kryptolebias_marmoratus
ENSIPUG00000002453puf60a9984.837ENSKMAG00000016745puf60b10085.221Kryptolebias_marmoratus
ENSIPUG00000002453puf60a9988.312ENSLBEG00000012505puf60b10088.312Labrus_bergylta
ENSIPUG00000002453puf60a8478.976ENSLACG00000005456PUF6010077.628Latimeria_chalumnae
ENSIPUG00000002453puf60a10086.069ENSLOCG00000010106puf60b9886.069Lepisosteus_oculatus
ENSIPUG00000002453puf60a9981.664ENSLAFG00000022929PUF609381.285Loxodonta_africana
ENSIPUG00000002453puf60a9982.798ENSMFAG00000043373PUF609882.420Macaca_fascicularis
ENSIPUG00000002453puf60a9982.798ENSMMUG00000013558PUF609782.420Macaca_mulatta
ENSIPUG00000002453puf60a9982.798ENSMNEG00000031099PUF609782.420Macaca_nemestrina
ENSIPUG00000002453puf60a9983.202ENSMLEG00000040009PUF6010082.806Mandrillus_leucophaeus
ENSIPUG00000002453puf60a9984.261ENSMAMG00000010394puf60b10082.243Mastacembelus_armatus
ENSIPUG00000002453puf60a10083.333ENSMAMG00000019476-9882.950Mastacembelus_armatus
ENSIPUG00000002453puf60a9985.542ENSMZEG00005018515puf60b10085.743Maylandia_zebra
ENSIPUG00000002453puf60a10082.726ENSMZEG00005019425-9882.917Maylandia_zebra
ENSIPUG00000002453puf60a9982.987ENSMGAG00000013070PUF609585.511Meleagris_gallopavo
ENSIPUG00000002453puf60a6984.330ENSMAUG00000014267-9084.330Mesocricetus_auratus
ENSIPUG00000002453puf60a9665.878ENSMAUG00000018549-9567.959Mesocricetus_auratus
ENSIPUG00000002453puf60a9982.798ENSMICG00000012226PUF609882.420Microcebus_murinus
ENSIPUG00000002453puf60a9982.609ENSMOCG00000018780Puf609381.907Microtus_ochrogaster
ENSIPUG00000002453puf60a9985.029ENSMMOG00000004217puf60b10085.029Mola_mola
ENSIPUG00000002453puf60a9976.552ENSMMOG00000018059-9975.402Mola_mola
ENSIPUG00000002453puf60a9982.231ENSMODG00000009161PUF609979.259Monodelphis_domestica
ENSIPUG00000002453puf60a10082.342ENSMALG00000000200-9881.574Monopterus_albus
ENSIPUG00000002453puf60a9978.776ENSMALG00000006797puf60b10075.849Monopterus_albus
ENSIPUG00000002453puf60a9982.798MGP_CAROLIEiJ_G0019910Puf609382.101Mus_caroli
ENSIPUG00000002453puf60a9982.798ENSMUSG00000002524Puf609382.101Mus_musculus
ENSIPUG00000002453puf60a9982.798MGP_PahariEiJ_G0019920Puf609382.101Mus_pahari
ENSIPUG00000002453puf60a9982.798MGP_SPRETEiJ_G0020812Puf609382.101Mus_spretus
ENSIPUG00000002453puf60a9982.798ENSMPUG00000008137PUF609182.420Mustela_putorius_furo
ENSIPUG00000002453puf60a9979.492ENSMLUG00000013032-9879.102Myotis_lucifugus
ENSIPUG00000002453puf60a9982.042ENSMLUG00000000238-9281.664Myotis_lucifugus
ENSIPUG00000002453puf60a9982.609ENSNGAG00000000712Puf6010082.231Nannospalax_galili
ENSIPUG00000002453puf60a10082.726ENSNBRG00000017223-9882.726Neolamprologus_brichardi
ENSIPUG00000002453puf60a8381.757ENSNBRG00000013047puf60b9783.294Neolamprologus_brichardi
ENSIPUG00000002453puf60a9982.798ENSNLEG00000002156PUF609882.031Nomascus_leucogenys
ENSIPUG00000002453puf60a7389.753ENSOPRG00000002147PUF607289.753Ochotona_princeps
ENSIPUG00000002453puf60a9762.008ENSODEG00000015513-9560.904Octodon_degus
ENSIPUG00000002453puf60a7290.625ENSODEG00000014024-9090.625Octodon_degus
ENSIPUG00000002453puf60a10082.917ENSONIG00000014030-9883.109Oreochromis_niloticus
ENSIPUG00000002453puf60a9985.029ENSONIG00000006247puf60b9785.221Oreochromis_niloticus
ENSIPUG00000002453puf60a9770.553ENSOANG00000006962PUF609769.368Ornithorhynchus_anatinus
ENSIPUG00000002453puf60a9980.614ENSORLG00000028655-9980.614Oryzias_latipes
ENSIPUG00000002453puf60a9985.605ENSORLG00000012279puf60b10085.413Oryzias_latipes
ENSIPUG00000002453puf60a9985.605ENSORLG00020007333puf6010085.413Oryzias_latipes_hni
ENSIPUG00000002453puf60a9980.998ENSORLG00020018144-9880.998Oryzias_latipes_hni
ENSIPUG00000002453puf60a9982.688ENSORLG00015016833-9880.998Oryzias_latipes_hsok
ENSIPUG00000002453puf60a9985.605ENSORLG00015007718puf60b10085.605Oryzias_latipes_hsok
ENSIPUG00000002453puf60a10082.567ENSOMEG00000022185-9882.726Oryzias_melastigma
ENSIPUG00000002453puf60a9984.444ENSOMEG00000001643puf60b10084.444Oryzias_melastigma
ENSIPUG00000002453puf60a9982.798ENSOGAG00000006259PUF609282.420Otolemur_garnettii
ENSIPUG00000002453puf60a9980.608ENSOARG00000016235PUF609780.228Ovis_aries
ENSIPUG00000002453puf60a9982.798ENSPPAG00000029933PUF609782.420Pan_paniscus
ENSIPUG00000002453puf60a9982.806ENSPPRG00000003257PUF6010082.411Panthera_pardus
ENSIPUG00000002453puf60a9981.871ENSPTIG00000009795PUF609979.619Panthera_tigris_altaica
ENSIPUG00000002453puf60a9982.798ENSPTRG00000020670PUF609782.420Pan_troglodytes
ENSIPUG00000002453puf60a9982.798ENSPTRG00000043963-9782.420Pan_troglodytes
ENSIPUG00000002453puf60a9982.798ENSPANG00000021936PUF609782.420Papio_anubis
ENSIPUG00000002453puf60a10089.122ENSPKIG00000004295puf60a10089.122Paramormyrops_kingsleyae
ENSIPUG00000002453puf60a9986.733ENSPKIG00000012204puf60b10086.590Paramormyrops_kingsleyae
ENSIPUG00000002453puf60a9982.798ENSPSIG00000004679PUF609882.420Pelodiscus_sinensis
ENSIPUG00000002453puf60a10083.238ENSPMGG00000013444puf60b9983.429Periophthalmus_magnuspinnatus
ENSIPUG00000002453puf60a9982.609ENSPEMG00000008820Puf609381.907Peromyscus_maniculatus_bairdii
ENSIPUG00000002453puf60a9982.798ENSPCIG00000020270PUF609882.420Phascolarctos_cinereus
ENSIPUG00000002453puf60a10081.382ENSPFOG00000011118-9880.998Poecilia_formosa
ENSIPUG00000002453puf60a9984.950ENSPFOG00000019217puf60b9985.347Poecilia_formosa
ENSIPUG00000002453puf60a10081.418ENSPLAG00000017025-9081.034Poecilia_latipinna
ENSIPUG00000002453puf60a9985.141ENSPLAG00000010754puf60b10085.542Poecilia_latipinna
ENSIPUG00000002453puf60a10081.992ENSPMEG00000009767-9081.609Poecilia_mexicana
ENSIPUG00000002453puf60a9985.141ENSPMEG00000000838puf60b10085.542Poecilia_mexicana
ENSIPUG00000002453puf60a9983.333ENSPREG00000005440puf60b10083.735Poecilia_reticulata
ENSIPUG00000002453puf60a8179.070ENSPPYG00000018951-9578.605Pongo_abelii
ENSIPUG00000002453puf60a8180.698ENSPCAG00000014837PUF6010080.233Procavia_capensis
ENSIPUG00000002453puf60a9982.609ENSPCOG00000027981PUF609882.231Propithecus_coquereli
ENSIPUG00000002453puf60a9990.244ENSPVAG00000016167PUF608190.244Pteropus_vampyrus
ENSIPUG00000002453puf60a9985.029ENSPNYG00000002556puf60b10085.221Pundamilia_nyererei
ENSIPUG00000002453puf60a10082.726ENSPNYG00000004273-9882.917Pundamilia_nyererei
ENSIPUG00000002453puf60a9978.947ENSPNAG00000019415puf60b9278.363Pygocentrus_nattereri
ENSIPUG00000002453puf60a9993.625ENSPNAG00000019909puf60a9994.422Pygocentrus_nattereri
ENSIPUG00000002453puf60a9982.798ENSRNOG00000009960Puf609382.101Rattus_norvegicus
ENSIPUG00000002453puf60a9982.798ENSRBIG00000035274PUF609782.420Rhinopithecus_bieti
ENSIPUG00000002453puf60a9982.798ENSRROG00000029360PUF609882.420Rhinopithecus_roxellana
ENSIPUG00000002453puf60a9981.474ENSSBOG00000027089PUF609781.096Saimiri_boliviensis_boliviensis
ENSIPUG00000002453puf60a9081.551ENSSHAG00000006668PUF609675.050Sarcophilus_harrisii
ENSIPUG00000002453puf60a10086.232ENSSFOG00015019371puf60a9889.157Scleropages_formosus
ENSIPUG00000002453puf60a9980.567ENSSFOG00015019619puf60b9983.000Scleropages_formosus
ENSIPUG00000002453puf60a7490.909ENSSMAG00000016381puf60b7490.909Scophthalmus_maximus
ENSIPUG00000002453puf60a9981.818ENSSDUG00000007048-9781.818Seriola_dumerili
ENSIPUG00000002453puf60a9983.271ENSSDUG00000009935puf60b10083.232Seriola_dumerili
ENSIPUG00000002453puf60a9985.029ENSSLDG00000024011puf60b10082.991Seriola_lalandi_dorsalis
ENSIPUG00000002453puf60a10080.998ENSSLDG00000007366-10081.165Seriola_lalandi_dorsalis
ENSIPUG00000002453puf60a6572.254ENSSPUG00000013518PUF609274.545Sphenodon_punctatus
ENSIPUG00000002453puf60a9983.846ENSSPAG00000020285-10083.846Stegastes_partitus
ENSIPUG00000002453puf60a9983.148ENSSPAG00000012144puf60b10083.178Stegastes_partitus
ENSIPUG00000002453puf60a9982.609ENSSSCG00000038800PUF609881.836Sus_scrofa
ENSIPUG00000002453puf60a5296.154ENSTGUG00000016423-10096.154Taeniopygia_guttata
ENSIPUG00000002453puf60a9981.524ENSTGUG00000012797-9981.524Taeniopygia_guttata
ENSIPUG00000002453puf60a9985.797ENSTRUG00000005420puf60b10083.738Takifugu_rubripes
ENSIPUG00000002453puf60a9979.038ENSTRUG00000008843-10081.653Takifugu_rubripes
ENSIPUG00000002453puf60a10079.304ENSTNIG00000003069-9979.497Tetraodon_nigroviridis
ENSIPUG00000002453puf60a9985.797ENSTNIG00000013675puf60b9985.988Tetraodon_nigroviridis
ENSIPUG00000002453puf60a7665.722ENSTBEG00000001899-10065.722Tupaia_belangeri
ENSIPUG00000002453puf60a6983.849ENSTBEG00000002751-9783.849Tupaia_belangeri
ENSIPUG00000002453puf60a9981.664ENSTTRG00000017088PUF6010081.474Tursiops_truncatus
ENSIPUG00000002453puf60a9982.798ENSUAMG00000024917PUF609782.420Ursus_americanus
ENSIPUG00000002453puf60a9977.694ENSUMAG00000000272PUF609277.127Ursus_maritimus
ENSIPUG00000002453puf60a9982.798ENSVVUG00000022527PUF6010082.420Vulpes_vulpes
ENSIPUG00000002453puf60a9980.354ENSXETG00000012469puf609979.961Xenopus_tropicalis
ENSIPUG00000002453puf60a9985.141ENSXCOG00000012355puf60b10085.542Xiphophorus_couchianus
ENSIPUG00000002453puf60a9981.746ENSXMAG00000010507-9980.952Xiphophorus_maculatus
ENSIPUG00000002453puf60a9984.645ENSXMAG00000001862puf60b10085.029Xiphophorus_maculatus

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