EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002483 (Gene tree)
Gene ID: 108267731
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7385 bases
Position: chr7:19780894-19788278
Accession: 108267731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003487	zf-U11-48K	PF05253.12	1.2e-18	1	2
ENSIPUP00000003487	zf-U11-48K	PF05253.12	1.2e-18	2	2
ENSIPUP00000003478	zf-U11-48K	PF05253.12	1.9e-18	1	2
ENSIPUP00000003478	zf-U11-48K	PF05253.12	1.9e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003652	-	4668	-	ENSIPUP00000003478	225 (aa)	-	-
ENSIPUT00000003661	-	3222	XM_017472094	ENSIPUP00000003487	185 (aa)	XP_017327583	A0A2D0RAJ8

Gene Model

Click here to download ENSIPUG00000002483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002483	-	87	45.342	ENSIPUG00000011498	zgc:56699	85	45.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002483	-	84	49.068	ENSG00000170627	GTSF1	96	48.780	Homo_sapiens
ENSIPUG00000002483	-	82	54.305	ENSAPOG00000022724	-	99	54.305	Acanthochromis_polyacanthus
ENSIPUG00000002483	-	82	48.052	ENSAMEG00000000939	GTSF1	92	47.771	Ailuropoda_melanoleuca
ENSIPUG00000002483	-	82	54.305	ENSAOCG00000022214	-	72	54.545	Amphiprion_ocellaris
ENSIPUG00000002483	-	68	48.462	ENSAPLG00000004814	GTSF1	91	48.462	Anas_platyrhynchos
ENSIPUG00000002483	-	65	44.628	ENSACAG00000029590	-	97	44.628	Anolis_carolinensis
ENSIPUG00000002483	-	86	45.122	ENSACAG00000014260	-	95	45.122	Anolis_carolinensis
ENSIPUG00000002483	-	84	50.610	ENSANAG00000024529	GTSF1	96	50.299	Aotus_nancymaae
ENSIPUG00000002483	-	84	47.799	ENSBTAG00000018085	GTSF1	94	47.799	Bos_taurus
ENSIPUG00000002483	-	84	50.000	ENSCJAG00000018968	-	94	50.000	Callithrix_jacchus
ENSIPUG00000002483	-	84	48.148	ENSCJAG00000039915	-	83	48.148	Callithrix_jacchus
ENSIPUG00000002483	-	84	47.799	ENSCAFG00000006465	-	96	47.531	Canis_familiaris
ENSIPUG00000002483	-	84	47.799	ENSCAFG00020020373	-	90	47.799	Canis_lupus_dingo
ENSIPUG00000002483	-	82	47.403	ENSCHIG00000012215	-	91	47.134	Capra_hircus
ENSIPUG00000002483	-	84	47.170	ENSTSYG00000004679	-	95	47.170	Carlito_syrichta
ENSIPUG00000002483	-	84	37.037	ENSTSYG00000035266	-	95	37.037	Carlito_syrichta
ENSIPUG00000002483	-	82	48.052	ENSCPOG00000008743	GTSF1	93	47.771	Cavia_porcellus
ENSIPUG00000002483	-	81	41.026	ENSCCAG00000032808	GTSF1	96	40.260	Cebus_capucinus
ENSIPUG00000002483	-	84	49.068	ENSCATG00000036328	GTSF1	96	48.780	Cercocebus_atys
ENSIPUG00000002483	-	82	48.052	ENSCLAG00000012811	GTSF1	93	47.771	Chinchilla_lanigera
ENSIPUG00000002483	-	82	49.359	ENSCSAG00000005394	GTSF1	98	49.057	Chlorocebus_sabaeus
ENSIPUG00000002483	-	84	47.468	ENSCHOG00000001659	GTSF1	96	47.205	Choloepus_hoffmanni
ENSIPUG00000002483	-	83	39.610	ENSCPBG00000024905	-	83	39.610	Chrysemys_picta_bellii
ENSIPUG00000002483	-	86	42.331	ENSCPBG00000005134	-	70	42.331	Chrysemys_picta_bellii
ENSIPUG00000002483	-	84	45.912	ENSCANG00000031776	-	96	45.679	Colobus_angolensis_palliatus
ENSIPUG00000002483	-	84	48.447	ENSCANG00000033118	GTSF1	94	48.447	Colobus_angolensis_palliatus
ENSIPUG00000002483	-	82	48.052	ENSCGRG00001013814	Gtsf1	91	48.052	Cricetulus_griseus_chok1gshd
ENSIPUG00000002483	-	82	48.052	ENSCGRG00000007733	Gtsf1	91	48.052	Cricetulus_griseus_crigri
ENSIPUG00000002483	-	82	47.403	ENSDNOG00000001438	-	77	47.134	Dasypus_novemcinctus
ENSIPUG00000002483	-	82	48.718	ENSDORG00000003228	Gtsf1	93	48.428	Dipodomys_ordii
ENSIPUG00000002483	-	84	45.912	ENSETEG00000009310	GTSF1	96	45.679	Echinops_telfairi
ENSIPUG00000002483	-	82	47.403	ENSEASG00005010260	GTSF1	82	47.403	Equus_asinus_asinus
ENSIPUG00000002483	-	82	47.403	ENSECAG00000013618	GTSF1	93	47.134	Equus_caballus
ENSIPUG00000002483	-	84	47.799	ENSEEUG00000005185	GTSF1	96	47.531	Erinaceus_europaeus
ENSIPUG00000002483	-	84	47.799	ENSFCAG00000010156	-	94	47.799	Felis_catus
ENSIPUG00000002483	-	64	47.059	ENSFALG00000007613	-	93	47.059	Ficedula_albicollis
ENSIPUG00000002483	-	82	48.077	ENSFDAG00000009383	GTSF1	91	48.077	Fukomys_damarensis
ENSIPUG00000002483	-	83	47.403	ENSGALG00000001109	GTSF1	96	47.403	Gallus_gallus
ENSIPUG00000002483	-	84	54.194	ENSGACG00000010783	-	85	54.194	Gasterosteus_aculeatus
ENSIPUG00000002483	-	56	44.762	ENSGAGG00000016342	-	98	44.762	Gopherus_agassizii
ENSIPUG00000002483	-	85	45.912	ENSGAGG00000011062	GTSF1	82	45.912	Gopherus_agassizii
ENSIPUG00000002483	-	84	49.068	ENSGGOG00000016063	GTSF1	96	48.780	Gorilla_gorilla
ENSIPUG00000002483	-	81	49.045	ENSHGLG00000002436	GTSF1	93	49.045	Heterocephalus_glaber_female
ENSIPUG00000002483	-	81	49.045	ENSHGLG00100017301	GTSF1	93	49.045	Heterocephalus_glaber_male
ENSIPUG00000002483	-	82	48.052	ENSSTOG00000025170	GTSF1	91	48.052	Ictidomys_tridecemlineatus
ENSIPUG00000002483	-	82	46.753	ENSJJAG00000003323	-	96	46.497	Jaculus_jaculus
ENSIPUG00000002483	-	78	44.898	ENSJJAG00000017442	-	93	44.667	Jaculus_jaculus
ENSIPUG00000002483	-	91	53.846	ENSKMAG00000006038	-	93	53.846	Kryptolebias_marmoratus
ENSIPUG00000002483	-	80	46.753	ENSLACG00000008870	GTSF1	77	46.753	Latimeria_chalumnae
ENSIPUG00000002483	-	82	48.052	ENSLAFG00000016318	GTSF1	91	48.052	Loxodonta_africana
ENSIPUG00000002483	-	84	49.068	ENSMFAG00000041178	GTSF1	96	48.780	Macaca_fascicularis
ENSIPUG00000002483	-	84	49.068	ENSMMUG00000003758	GTSF1	96	48.780	Macaca_mulatta
ENSIPUG00000002483	-	84	49.068	ENSMNEG00000036779	GTSF1	96	48.780	Macaca_nemestrina
ENSIPUG00000002483	-	84	48.447	ENSMLEG00000028375	GTSF1	96	48.171	Mandrillus_leucophaeus
ENSIPUG00000002483	-	70	47.692	ENSMGAG00000000685	GTSF1	91	47.692	Meleagris_gallopavo
ENSIPUG00000002483	-	82	37.821	ENSMAUG00000018746	Gtsf1	91	37.736	Mesocricetus_auratus
ENSIPUG00000002483	-	84	47.799	ENSMICG00000008444	-	96	47.531	Microcebus_murinus
ENSIPUG00000002483	-	82	48.052	ENSMOCG00000018889	Gtsf1	92	48.052	Microtus_ochrogaster
ENSIPUG00000002483	-	84	44.025	ENSMODG00000019422	GTSF1	94	44.025	Monodelphis_domestica
ENSIPUG00000002483	-	88	45.251	MGP_CAROLIEiJ_G0020379	Gtsf1	94	52.893	Mus_caroli
ENSIPUG00000002483	-	88	45.251	ENSMUSG00000022487	Gtsf1	94	52.893	Mus_musculus
ENSIPUG00000002483	-	94	44.318	MGP_PahariEiJ_G0020378	Gtsf1	94	52.893	Mus_pahari
ENSIPUG00000002483	-	88	45.251	MGP_SPRETEiJ_G0021272	Gtsf1	94	52.893	Mus_spretus
ENSIPUG00000002483	-	84	46.541	ENSMPUG00000019323	-	96	46.296	Mustela_putorius_furo
ENSIPUG00000002483	-	80	45.455	ENSMPUG00000019140	-	92	45.455	Mustela_putorius_furo
ENSIPUG00000002483	-	82	46.753	ENSMPUG00000005669	-	91	46.753	Mustela_putorius_furo
ENSIPUG00000002483	-	84	45.679	ENSMLUG00000026557	-	96	45.679	Myotis_lucifugus
ENSIPUG00000002483	-	84	47.799	ENSMLUG00000012961	-	96	47.531	Myotis_lucifugus
ENSIPUG00000002483	-	82	48.077	ENSNGAG00000014213	Gtsf1	93	48.750	Nannospalax_galili
ENSIPUG00000002483	-	84	48.447	ENSNLEG00000017635	GTSF1	96	48.171	Nomascus_leucogenys
ENSIPUG00000002483	-	74	41.727	ENSMEUG00000016206	GTSF1	84	41.549	Notamacropus_eugenii
ENSIPUG00000002483	-	82	48.052	ENSODEG00000014220	GTSF1	93	47.771	Octodon_degus
ENSIPUG00000002483	-	82	49.673	ENSOANG00000011386	GTSF1	91	49.673	Ornithorhynchus_anatinus
ENSIPUG00000002483	-	84	47.170	ENSOCUG00000024495	GTSF1	94	47.170	Oryctolagus_cuniculus
ENSIPUG00000002483	-	81	46.309	ENSORLG00015005017	-	91	46.309	Oryzias_latipes_hsok
ENSIPUG00000002483	-	82	46.753	ENSOGAG00000017227	GTSF1	91	46.497	Otolemur_garnettii
ENSIPUG00000002483	-	84	47.799	ENSOARG00000016162	GTSF1	94	47.799	Ovis_aries
ENSIPUG00000002483	-	84	49.068	ENSPPAG00000028506	GTSF1	96	48.780	Pan_paniscus
ENSIPUG00000002483	-	84	44.654	ENSPPRG00000017612	-	87	44.444	Panthera_pardus
ENSIPUG00000002483	-	84	47.799	ENSPPRG00000004344	-	96	47.531	Panthera_pardus
ENSIPUG00000002483	-	84	45.283	ENSPTIG00000010868	-	87	45.062	Panthera_tigris_altaica
ENSIPUG00000002483	-	84	47.799	ENSPTIG00000020415	-	96	47.531	Panthera_tigris_altaica
ENSIPUG00000002483	-	84	49.068	ENSPTRG00000005041	GTSF1	96	48.780	Pan_troglodytes
ENSIPUG00000002483	-	84	49.068	ENSPANG00000020579	GTSF1	96	48.780	Papio_anubis
ENSIPUG00000002483	-	82	46.452	ENSPSIG00000009968	GTSF1	75	46.452	Pelodiscus_sinensis
ENSIPUG00000002483	-	63	44.915	ENSPSIG00000009839	-	72	46.218	Pelodiscus_sinensis
ENSIPUG00000002483	-	82	48.052	ENSPEMG00000009595	Gtsf1	91	48.052	Peromyscus_maniculatus_bairdii
ENSIPUG00000002483	-	84	44.444	ENSPCIG00000006731	GTSF1	96	44.444	Phascolarctos_cinereus
ENSIPUG00000002483	-	84	49.068	ENSPPYG00000004605	GTSF1	96	48.780	Pongo_abelii
ENSIPUG00000002483	-	87	38.037	ENSPCOG00000015201	-	92	39.073	Propithecus_coquereli
ENSIPUG00000002483	-	84	47.799	ENSPCOG00000016907	-	94	47.799	Propithecus_coquereli
ENSIPUG00000002483	-	84	47.799	ENSPVAG00000000333	GTSF1	96	47.531	Pteropus_vampyrus
ENSIPUG00000002483	-	99	66.120	ENSPNAG00000005737	-	99	66.120	Pygocentrus_nattereri
ENSIPUG00000002483	-	82	48.052	ENSRNOG00000036831	Gtsf1	80	48.052	Rattus_norvegicus
ENSIPUG00000002483	-	84	43.478	ENSRBIG00000039916	-	85	43.293	Rhinopithecus_bieti
ENSIPUG00000002483	-	84	48.447	ENSRBIG00000043438	-	94	48.447	Rhinopithecus_bieti
ENSIPUG00000002483	-	84	49.068	ENSRROG00000008137	GTSF1	96	48.780	Rhinopithecus_roxellana
ENSIPUG00000002483	-	84	50.000	ENSSBOG00000029460	GTSF1	96	49.701	Saimiri_boliviensis_boliviensis
ENSIPUG00000002483	-	84	44.025	ENSSHAG00000011633	GTSF1	94	44.025	Sarcophilus_harrisii
ENSIPUG00000002483	-	68	52.381	ENSSARG00000004928	GTSF1	74	52.381	Sorex_araneus
ENSIPUG00000002483	-	60	48.214	ENSSPUG00000010064	GTSF1	95	48.214	Sphenodon_punctatus
ENSIPUG00000002483	-	84	46.541	ENSSSCG00000026333	GTSF1	96	46.296	Sus_scrofa
ENSIPUG00000002483	-	64	47.899	ENSTGUG00000002008	-	91	47.899	Taeniopygia_guttata
ENSIPUG00000002483	-	82	47.712	ENSTBEG00000006154	GTSF1	96	47.436	Tupaia_belangeri
ENSIPUG00000002483	-	84	47.799	ENSTTRG00000004470	GTSF1	94	47.799	Tursiops_truncatus
ENSIPUG00000002483	-	84	47.799	ENSUAMG00000021669	GTSF1	92	47.531	Ursus_americanus
ENSIPUG00000002483	-	84	47.799	ENSUMAG00000011279	GTSF1	96	47.531	Ursus_maritimus
ENSIPUG00000002483	-	84	48.101	ENSVPAG00000007016	GTSF1	96	47.826	Vicugna_pacos
ENSIPUG00000002483	-	84	47.799	ENSVVUG00000023687	-	79	47.170	Vulpes_vulpes
ENSIPUG00000002483	-	97	44.385	ENSXETG00000033546	gtsf1	98	39.301	Xenopus_tropicalis