EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003528	zf-C2H2	PF00096.26	4.3e-18	1	2
ENSIPUP00000003528	zf-C2H2	PF00096.26	4.3e-18	2	2
ENSIPUP00000003528	zf-met	PF12874.7	5.4e-09	1	2
ENSIPUP00000003528	zf-met	PF12874.7	5.4e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003702	-	1912	XM_017475097	ENSIPUP00000003528	568 (aa)	XP_017330586	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002510	-	65	32.258	ENSIPUG00000001248	prdm5	76	32.258
ENSIPUG00000002510	-	57	31.122	ENSIPUG00000003011	-	56	31.122
ENSIPUG00000002510	-	53	30.769	ENSIPUG00000021434	-	92	30.769
ENSIPUG00000002510	-	54	30.481	ENSIPUG00000012769	gfi1b	56	30.481
ENSIPUG00000002510	-	71	32.065	ENSIPUG00000005581	-	78	32.065
ENSIPUG00000002510	-	56	31.214	ENSIPUG00000021527	-	94	31.214
ENSIPUG00000002510	-	61	30.435	ENSIPUG00000022751	-	99	31.159
ENSIPUG00000002510	-	56	30.137	ENSIPUG00000015037	znf711	53	30.137
ENSIPUG00000002510	-	55	34.667	ENSIPUG00000005733	-	66	30.328
ENSIPUG00000002510	-	55	31.959	ENSIPUG00000021518	-	86	31.959
ENSIPUG00000002510	-	58	31.250	ENSIPUG00000021515	-	85	31.250
ENSIPUG00000002510	-	54	30.994	ENSIPUG00000015233	-	74	30.814
ENSIPUG00000002510	-	60	31.217	ENSIPUG00000011073	-	99	32.639
ENSIPUG00000002510	-	55	32.941	ENSIPUG00000001941	-	85	32.941
ENSIPUG00000002510	-	57	30.435	ENSIPUG00000021472	-	90	30.435
ENSIPUG00000002510	-	59	31.579	ENSIPUG00000015601	-	70	31.579
ENSIPUG00000002510	-	57	31.068	ENSIPUG00000021998	-	96	31.068
ENSIPUG00000002510	-	63	31.847	ENSIPUG00000016009	znf596	61	31.646
ENSIPUG00000002510	-	55	30.252	ENSIPUG00000009750	-	93	30.000
ENSIPUG00000002510	-	53	32.474	ENSIPUG00000021484	-	98	32.474
ENSIPUG00000002510	-	63	34.641	ENSIPUG00000013065	-	99	33.939
ENSIPUG00000002510	-	56	30.534	ENSIPUG00000011399	zbtb47b	74	30.534
ENSIPUG00000002510	-	56	31.169	ENSIPUG00000006916	-	77	30.719
ENSIPUG00000002510	-	57	31.193	ENSIPUG00000004905	znf236	57	31.193
ENSIPUG00000002510	-	53	30.208	ENSIPUG00000021556	-	84	30.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002510	-	62	33.094	ENSCSAVG00000009574	-	99	33.094	Ciona_savignyi
ENSIPUG00000002510	-	55	31.858	ENSFHEG00000020889	-	75	31.858	Fundulus_heteroclitus
ENSIPUG00000002510	-	57	40.625	ENSFHEG00000012990	-	70	32.456	Fundulus_heteroclitus
ENSIPUG00000002510	-	51	34.314	ENSMMOG00000001961	-	96	34.314	Mola_mola
ENSIPUG00000002510	-	54	30.481	ENSONIG00000009894	-	99	30.481	Oreochromis_niloticus
ENSIPUG00000002510	-	66	50.621	ENSPMGG00000013602	-	53	50.621	Periophthalmus_magnuspinnatus
ENSIPUG00000002510	-	55	32.231	ENSPMGG00000000458	-	64	32.558	Periophthalmus_magnuspinnatus
ENSIPUG00000002510	-	62	32.558	ENSPMGG00000022524	-	77	32.558	Periophthalmus_magnuspinnatus
ENSIPUG00000002510	-	55	30.070	ENSPMGG00000019842	-	72	30.496	Periophthalmus_magnuspinnatus
ENSIPUG00000002510	-	61	30.357	ENSPFOG00000002879	-	99	30.357	Poecilia_formosa
ENSIPUG00000002510	-	57	52.439	ENSSMAG00000001359	-	90	52.439	Scophthalmus_maximus
ENSIPUG00000002510	-	61	53.943	ENSSLDG00000015796	-	73	53.943	Seriola_lalandi_dorsalis
ENSIPUG00000002510	-	58	54.180	ENSTRUG00000019941	-	54	54.180	Takifugu_rubripes
ENSIPUG00000002510	-	58	50.898	ENSTNIG00000008154	-	99	50.898	Tetraodon_nigroviridis