EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002513 (Gene tree)
Gene ID: 108268204
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 84-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 10509 bases
Position: chr1:6310232-6320740
Accession: 108268204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	1	6
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	2	6
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	3	6
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	4	6
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	5	6
ENSIPUP00000003532	zf-C2H2	PF00096.26	4.6e-35	6	6
ENSIPUP00000003532	zf-met	PF12874.7	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003706	-	4288	XM_017473022	ENSIPUP00000003532	408 (aa)	XP_017328511	A0A2D0REE4

Gene Model

Click here to download ENSIPUG00000002513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002513	-	86	37.500	ENSIPUG00000015400	-	93	37.500
ENSIPUG00000002513	-	86	35.897	ENSIPUG00000022751	-	97	33.613
ENSIPUG00000002513	-	85	41.463	ENSIPUG00000015177	-	66	41.463
ENSIPUG00000002513	-	95	31.405	ENSIPUG00000015468	-	95	31.405
ENSIPUG00000002513	-	75	34.483	ENSIPUG00000023635	-	94	38.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002513	-	100	74.702	ENSAMXG00000038507	-	100	74.638	Astyanax_mexicanus
ENSIPUG00000002513	-	82	36.982	ENSCSEG00000012798	-	97	37.278	Cynoglossus_semilaevis
ENSIPUG00000002513	-	100	46.635	ENSELUG00000009258	-	100	45.854	Esox_lucius
ENSIPUG00000002513	-	97	59.954	ENSELUG00000020907	-	98	57.528	Esox_lucius
ENSIPUG00000002513	-	98	59.259	ENSFHEG00000005807	-	97	60.494	Fundulus_heteroclitus
ENSIPUG00000002513	-	98	62.683	ENSGAFG00000003348	-	97	62.927	Gambusia_affinis
ENSIPUG00000002513	-	98	61.614	ENSKMAG00000014028	-	91	61.125	Kryptolebias_marmoratus
ENSIPUG00000002513	-	99	60.723	ENSMMOG00000009859	-	99	60.723	Mola_mola
ENSIPUG00000002513	-	98	60.341	ENSORLG00000023072	-	98	60.341	Oryzias_latipes
ENSIPUG00000002513	-	98	61.314	ENSORLG00020002684	-	98	61.314	Oryzias_latipes_hni
ENSIPUG00000002513	-	98	60.584	ENSORLG00015018897	-	98	60.584	Oryzias_latipes_hsok
ENSIPUG00000002513	-	98	58.937	ENSOMEG00000010520	-	93	60.341	Oryzias_melastigma
ENSIPUG00000002513	-	98	62.347	ENSPLAG00000005849	-	97	62.103	Poecilia_latipinna
ENSIPUG00000002513	-	98	62.195	ENSPMEG00000020957	-	97	62.439	Poecilia_mexicana
ENSIPUG00000002513	-	98	62.287	ENSPREG00000007939	-	97	61.463	Poecilia_reticulata
ENSIPUG00000002513	-	100	79.227	ENSPNAG00000003839	-	100	80.147	Pygocentrus_nattereri
ENSIPUG00000002513	-	100	62.740	ENSSFOG00015019679	-	100	62.981	Scleropages_formosus
ENSIPUG00000002513	-	98	61.893	ENSXCOG00000015432	-	97	62.136	Xiphophorus_couchianus
ENSIPUG00000002513	-	98	62.379	ENSXMAG00000029995	-	87	62.621	Xiphophorus_maculatus