EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000002548 (Gene tree)
Gene ID: 108265278
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: zinc finger protein 629-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11140 bases
Position: chr1:6408051-6419190
Accession: 108265278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	1	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	2	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	3	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	4	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	5	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	6	7
ENSIPUP00000003587	zf-C2H2	PF00096.26	8.3e-41	7	7
ENSIPUP00000003587	zf-met	PF12874.7	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003762	-	6591	XM_017467432	ENSIPUP00000003587	1360 (aa)	XP_017322921	A0A2D0QYU0

Gene Model

Click here to download ENSIPUG00000002548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000002548	zgc:66448	52	34.978	ENSIPUG00000015468	-	87	32.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002548	zgc:66448	68	67.259	ENSAMXG00000036663	zgc:66448	100	52.647	Astyanax_mexicanus
ENSIPUG00000002548	zgc:66448	88	48.270	ENSDARG00000022952	zgc:66448	81	49.366	Danio_rerio
ENSIPUG00000002548	zgc:66448	91	40.829	ENSGAFG00000003391	zgc:66448	74	43.655	Gambusia_affinis
ENSIPUG00000002548	zgc:66448	95	40.263	ENSKMAG00000014091	zgc:66448	72	44.663	Kryptolebias_marmoratus
ENSIPUG00000002548	zgc:66448	51	37.059	ENSLBEG00000013570	-	99	42.778	Labrus_bergylta
ENSIPUG00000002548	zgc:66448	50	32.157	ENSMZEG00005014355	-	94	44.928	Maylandia_zebra
ENSIPUG00000002548	zgc:66448	84	42.963	ENSORLG00015018781	zgc:66448	95	39.634	Oryzias_latipes_hsok
ENSIPUG00000002548	zgc:66448	83	42.699	ENSOMEG00000010575	zgc:66448	99	46.301	Oryzias_melastigma
ENSIPUG00000002548	zgc:66448	86	42.591	ENSSMAG00000001305	zgc:66448	85	42.330	Scophthalmus_maximus
ENSIPUG00000002548	zgc:66448	88	41.032	ENSXMAG00000022364	zgc:66448	85	47.059	Xiphophorus_maculatus