EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000002559 (Gene tree)
Gene ID: 108267861
Gene Symbol: sall2
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 37563 bases
Position: chr7:19833491-19871053
Accession: 108267861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003651	zf-C2H2	PF00096.26	9e-19	1	2
ENSIPUP00000003651	zf-C2H2	PF00096.26	9e-19	2	2
ENSIPUP00000003660	zf-C2H2	PF00096.26	7.3e-17	1	1
ENSIPUP00000003651	zf-met	PF12874.7	1.1e-11	1	2
ENSIPUP00000003651	zf-met	PF12874.7	1.1e-11	2	2
ENSIPUP00000003660	zf-met	PF12874.7	2.6e-11	1	2
ENSIPUP00000003660	zf-met	PF12874.7	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003829	-	5465	XM_017472332	ENSIPUP00000003651	1205 (aa)	XP_017327821	A0A2D0RCG2
ENSIPUT00000003839	-	3447	-	ENSIPUP00000003660	1148 (aa)	-	-
ENSIPUT00000003819	-	567	-	ENSIPUP00000003642	189 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000002559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002559	sall2	99	51.759	ENSAPOG00000013387	si:ch211-212k18.5	98	52.669	Acanthochromis_polyacanthus
ENSIPUG00000002559	sall2	50	50.323	ENSAPOG00000015347	sall2	73	45.116	Acanthochromis_polyacanthus
ENSIPUG00000002559	sall2	75	60.233	ENSACIG00000019922	si:ch211-212k18.5	95	61.229	Amphilophus_citrinellus
ENSIPUG00000002559	sall2	64	49.433	ENSAOCG00000016559	sall2	76	44.513	Amphiprion_ocellaris
ENSIPUG00000002559	sall2	99	52.055	ENSAOCG00000010737	si:ch211-212k18.5	99	53.191	Amphiprion_ocellaris
ENSIPUG00000002559	sall2	53	49.123	ENSAPEG00000020215	sall2	83	47.158	Amphiprion_percula
ENSIPUG00000002559	sall2	99	51.974	ENSAPEG00000006751	si:ch211-212k18.5	99	53.028	Amphiprion_percula
ENSIPUG00000002559	sall2	52	46.164	ENSATEG00000007303	sall2	51	72.727	Anabas_testudineus
ENSIPUG00000002559	sall2	69	63.448	ENSATEG00000001254	si:ch211-212k18.5	92	65.434	Anabas_testudineus
ENSIPUG00000002559	sall2	56	64.865	ENSACLG00000019867	sall2	51	78.571	Astatotilapia_calliptera
ENSIPUG00000002559	sall2	99	50.778	ENSACLG00000009709	si:ch211-212k18.5	99	52.236	Astatotilapia_calliptera
ENSIPUG00000002559	sall2	82	42.793	ENSAMXG00000020956	sall2	90	41.432	Astyanax_mexicanus
ENSIPUG00000002559	sall2	100	72.512	ENSAMXG00000010979	si:ch211-212k18.5	99	73.780	Astyanax_mexicanus
ENSIPUG00000002559	sall2	99	50.827	ENSCSEG00000004426	si:ch211-212k18.5	99	53.218	Cynoglossus_semilaevis
ENSIPUG00000002559	sall2	56	45.714	ENSCSEG00000021148	sall2	56	46.097	Cynoglossus_semilaevis
ENSIPUG00000002559	sall2	99	51.339	ENSCVAG00000007475	si:ch211-212k18.5	99	52.126	Cyprinodon_variegatus
ENSIPUG00000002559	sall2	56	46.388	ENSCVAG00000006032	sall2	62	45.522	Cyprinodon_variegatus
ENSIPUG00000002559	sall2	96	65.845	ENSDARG00000103316	si:ch211-212k18.5	97	64.877	Danio_rerio
ENSIPUG00000002559	sall2	66	46.356	ENSDARG00000075116	sall2	53	66.102	Danio_rerio
ENSIPUG00000002559	sall2	99	51.467	ENSELUG00000024534	si:ch211-212k18.5	99	52.298	Esox_lucius
ENSIPUG00000002559	sall2	74	50.263	ENSELUG00000004389	sall2	58	58.031	Esox_lucius
ENSIPUG00000002559	sall2	96	55.074	ENSFHEG00000017264	si:ch211-212k18.5	96	55.035	Fundulus_heteroclitus
ENSIPUG00000002559	sall2	53	47.137	ENSFHEG00000017550	sall2	67	46.746	Fundulus_heteroclitus
ENSIPUG00000002559	sall2	99	52.128	ENSGAFG00000003746	si:ch211-212k18.5	99	52.451	Gambusia_affinis
ENSIPUG00000002559	sall2	53	47.114	ENSGAFG00000015194	sall2	55	49.164	Gambusia_affinis
ENSIPUG00000002559	sall2	71	64.865	ENSHBUG00000002882	sall2	73	43.984	Haplochromis_burtoni
ENSIPUG00000002559	sall2	99	50.896	ENSHBUG00000019672	si:ch211-212k18.5	99	53.705	Haplochromis_burtoni
ENSIPUG00000002559	sall2	74	59.277	ENSHCOG00000002842	si:ch211-212k18.5	81	57.835	Hippocampus_comes
ENSIPUG00000002559	sall2	95	53.339	ENSKMAG00000019657	si:ch211-212k18.5	97	53.081	Kryptolebias_marmoratus
ENSIPUG00000002559	sall2	58	51.613	ENSKMAG00000020172	sall2	71	42.923	Kryptolebias_marmoratus
ENSIPUG00000002559	sall2	99	53.367	ENSLBEG00000020887	si:ch211-212k18.5	99	53.206	Labrus_bergylta
ENSIPUG00000002559	sall2	69	63.426	ENSMAMG00000015887	si:ch211-212k18.5	99	65.143	Mastacembelus_armatus
ENSIPUG00000002559	sall2	57	60.000	ENSMAMG00000016229	sall2	62	58.696	Mastacembelus_armatus
ENSIPUG00000002559	sall2	99	50.855	ENSMZEG00005021214	si:ch211-212k18.5	99	52.316	Maylandia_zebra
ENSIPUG00000002559	sall2	71	64.865	ENSMZEG00005012103	sall2	73	43.984	Maylandia_zebra
ENSIPUG00000002559	sall2	84	62.045	ENSMMOG00000012726	si:ch211-212k18.5	95	63.982	Mola_mola
ENSIPUG00000002559	sall2	92	51.607	ENSMALG00000000979	si:ch211-212k18.5	89	62.810	Monopterus_albus
ENSIPUG00000002559	sall2	94	41.888	ENSNBRG00000017645	sall2	99	41.652	Neolamprologus_brichardi
ENSIPUG00000002559	sall2	94	54.505	ENSNBRG00000023948	si:ch211-212k18.5	96	54.625	Neolamprologus_brichardi
ENSIPUG00000002559	sall2	96	50.166	ENSORLG00000030429	si:ch211-212k18.5	97	52.145	Oryzias_latipes
ENSIPUG00000002559	sall2	53	47.028	ENSORLG00000026871	sall2	63	64.286	Oryzias_latipes
ENSIPUG00000002559	sall2	96	51.436	ENSORLG00020008145	si:ch211-212k18.5	97	52.265	Oryzias_latipes_hni
ENSIPUG00000002559	sall2	53	46.103	ENSORLG00020007873	sall2	63	64.286	Oryzias_latipes_hni
ENSIPUG00000002559	sall2	53	46.509	ENSORLG00015002422	sall2	60	45.141	Oryzias_latipes_hsok
ENSIPUG00000002559	sall2	96	50.209	ENSORLG00015004982	si:ch211-212k18.5	97	52.071	Oryzias_latipes_hsok
ENSIPUG00000002559	sall2	96	50.458	ENSOMEG00000013949	si:ch211-212k18.5	97	52.159	Oryzias_melastigma
ENSIPUG00000002559	sall2	53	47.036	ENSOMEG00000012904	sall2	64	64.286	Oryzias_melastigma
ENSIPUG00000002559	sall2	64	58.059	ENSPKIG00000009207	sall2	92	43.533	Paramormyrops_kingsleyae
ENSIPUG00000002559	sall2	94	51.644	ENSPMGG00000018714	si:ch211-212k18.5	99	51.644	Periophthalmus_magnuspinnatus
ENSIPUG00000002559	sall2	99	51.629	ENSPFOG00000023705	si:ch211-212k18.5	100	53.659	Poecilia_formosa
ENSIPUG00000002559	sall2	57	45.769	ENSPFOG00000016504	sall2	62	60.976	Poecilia_formosa
ENSIPUG00000002559	sall2	53	45.989	ENSPLAG00000018320	sall2	65	60.976	Poecilia_latipinna
ENSIPUG00000002559	sall2	99	51.404	ENSPLAG00000002577	si:ch211-212k18.5	99	51.875	Poecilia_latipinna
ENSIPUG00000002559	sall2	99	51.852	ENSPMEG00000016395	si:ch211-212k18.5	100	54.584	Poecilia_mexicana
ENSIPUG00000002559	sall2	53	46.205	ENSPMEG00000006335	sall2	62	60.976	Poecilia_mexicana
ENSIPUG00000002559	sall2	99	51.383	ENSPREG00000005292	si:ch211-212k18.5	99	52.054	Poecilia_reticulata
ENSIPUG00000002559	sall2	53	46.257	ENSPREG00000021908	sall2	64	46.087	Poecilia_reticulata
ENSIPUG00000002559	sall2	99	52.181	ENSPNYG00000021576	si:ch211-212k18.5	99	53.179	Pundamilia_nyererei
ENSIPUG00000002559	sall2	100	76.264	ENSPNAG00000006123	si:ch211-212k18.5	100	76.427	Pygocentrus_nattereri
ENSIPUG00000002559	sall2	57	47.979	ENSPNAG00000021463	sall2	60	49.931	Pygocentrus_nattereri
ENSIPUG00000002559	sall2	99	53.834	ENSSMAG00000006241	si:ch211-212k18.5	99	53.922	Scophthalmus_maximus
ENSIPUG00000002559	sall2	72	65.000	ENSSMAG00000014157	sall2	73	45.723	Scophthalmus_maximus
ENSIPUG00000002559	sall2	78	44.842	ENSSDUG00000012274	sall2	75	43.744	Seriola_dumerili
ENSIPUG00000002559	sall2	99	52.862	ENSSDUG00000006164	si:ch211-212k18.5	98	54.184	Seriola_dumerili
ENSIPUG00000002559	sall2	77	44.227	ENSSLDG00000001653	sall2	60	50.729	Seriola_lalandi_dorsalis
ENSIPUG00000002559	sall2	99	53.108	ENSSLDG00000003393	si:ch211-212k18.5	98	53.895	Seriola_lalandi_dorsalis
ENSIPUG00000002559	sall2	54	46.795	ENSSPAG00000023009	sall2	73	45.308	Stegastes_partitus
ENSIPUG00000002559	sall2	94	56.028	ENSSPAG00000013435	si:ch211-212k18.5	97	56.087	Stegastes_partitus
ENSIPUG00000002559	sall2	75	61.351	ENSTRUG00000025082	si:ch211-212k18.5	83	60.281	Takifugu_rubripes
ENSIPUG00000002559	sall2	54	45.370	ENSTRUG00000024556	sall2	59	45.672	Takifugu_rubripes
ENSIPUG00000002559	sall2	52	35.098	ENSTNIG00000007934	sall2	51	70.213	Tetraodon_nigroviridis
ENSIPUG00000002559	sall2	96	52.409	ENSXCOG00000000762	si:ch211-212k18.5	99	52.036	Xiphophorus_couchianus
ENSIPUG00000002559	sall2	95	52.314	ENSXMAG00000001461	si:ch211-212k18.5	99	51.724	Xiphophorus_maculatus
ENSIPUG00000002559	sall2	52	47.200	ENSXMAG00000000902	sall2	62	60.976	Xiphophorus_maculatus