EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000002573 (Gene tree)
Gene ID: 108268836
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 3264 bases
Position: chr8:15350065-15353328
Accession: 108268836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000003617	PTS_2-RNA	PF01885.16	5.1e-61	1	1
ENSIPUP00000003621	PTS_2-RNA	PF01885.16	5.4e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000003798	-	869	-	ENSIPUP00000003621	234 (aa)	-	-
ENSIPUT00000003794	-	854	XM_017474084	ENSIPUP00000003617	229 (aa)	XP_017329573	A0A2D0RGB3

Gene Model

Click here to download ENSIPUG00000002573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000002573	trpt1	99	52.863	ENSG00000149743	TRPT1	88	53.254	Homo_sapiens
ENSIPUG00000002573	trpt1	90	63.768	ENSAPOG00000012925	trpt1	90	63.768	Acanthochromis_polyacanthus
ENSIPUG00000002573	trpt1	90	55.024	ENSAMEG00000018040	TRPT1	82	54.762	Ailuropoda_melanoleuca
ENSIPUG00000002573	trpt1	86	67.677	ENSACIG00000022413	trpt1	89	67.000	Amphilophus_citrinellus
ENSIPUG00000002573	trpt1	90	65.700	ENSAOCG00000001163	trpt1	80	65.403	Amphiprion_ocellaris
ENSIPUG00000002573	trpt1	90	64.734	ENSAPEG00000009873	trpt1	92	64.455	Amphiprion_percula
ENSIPUG00000002573	trpt1	91	68.750	ENSATEG00000014371	trpt1	91	68.750	Anabas_testudineus
ENSIPUG00000002573	trpt1	88	55.941	ENSACAG00000000696	TRPT1	92	55.072	Anolis_carolinensis
ENSIPUG00000002573	trpt1	99	53.509	ENSANAG00000019580	TRPT1	82	54.286	Aotus_nancymaae
ENSIPUG00000002573	trpt1	90	67.150	ENSACLG00000016893	trpt1	90	67.150	Astatotilapia_calliptera
ENSIPUG00000002573	trpt1	100	78.166	ENSAMXG00000010533	trpt1	100	77.729	Astyanax_mexicanus
ENSIPUG00000002573	trpt1	96	56.306	ENSBTAG00000016555	TRPT1	88	56.284	Bos_taurus
ENSIPUG00000002573	trpt1	99	52.838	ENSCJAG00000018169	TRPT1	82	54.286	Callithrix_jacchus
ENSIPUG00000002573	trpt1	90	56.459	ENSCAFG00000014591	TRPT1	82	56.311	Canis_familiaris
ENSIPUG00000002573	trpt1	90	56.459	ENSCAFG00020014101	TRPT1	84	56.190	Canis_lupus_dingo
ENSIPUG00000002573	trpt1	96	55.405	ENSCHIG00000021308	TRPT1	83	56.667	Capra_hircus
ENSIPUG00000002573	trpt1	77	54.190	ENSTSYG00000026766	TRPT1	98	48.235	Carlito_syrichta
ENSIPUG00000002573	trpt1	92	55.660	ENSCAPG00000016934	TRPT1	87	55.714	Cavia_aperea
ENSIPUG00000002573	trpt1	92	55.924	ENSCPOG00000002923	TRPT1	82	56.250	Cavia_porcellus
ENSIPUG00000002573	trpt1	77	53.631	ENSCCAG00000025683	TRPT1	88	53.631	Cebus_capucinus
ENSIPUG00000002573	trpt1	99	52.863	ENSCATG00000031563	TRPT1	82	53.110	Cercocebus_atys
ENSIPUG00000002573	trpt1	96	54.751	ENSCLAG00000016380	TRPT1	82	55.024	Chinchilla_lanigera
ENSIPUG00000002573	trpt1	99	53.070	ENSCSAG00000006952	TRPT1	82	53.333	Chlorocebus_sabaeus
ENSIPUG00000002573	trpt1	62	46.207	ENSCING00000002405	-	77	46.207	Ciona_intestinalis
ENSIPUG00000002573	trpt1	88	37.561	ENSCING00000024241	-	82	37.561	Ciona_intestinalis
ENSIPUG00000002573	trpt1	85	40.609	ENSCSAVG00000011071	-	61	40.609	Ciona_savignyi
ENSIPUG00000002573	trpt1	93	37.900	ENSCSAVG00000003949	-	87	39.286	Ciona_savignyi
ENSIPUG00000002573	trpt1	96	54.299	ENSCANG00000042980	TRPT1	82	53.589	Colobus_angolensis_palliatus
ENSIPUG00000002573	trpt1	96	53.153	ENSCGRG00001008474	Trpt1	83	54.286	Cricetulus_griseus_chok1gshd
ENSIPUG00000002573	trpt1	96	53.153	ENSCGRG00000009793	Trpt1	83	54.286	Cricetulus_griseus_crigri
ENSIPUG00000002573	trpt1	88	67.164	ENSCSEG00000005840	trpt1	87	67.164	Cynoglossus_semilaevis
ENSIPUG00000002573	trpt1	95	63.134	ENSCVAG00000006318	trpt1	95	65.196	Cyprinodon_variegatus
ENSIPUG00000002573	trpt1	90	73.430	ENSDARG00000037628	trpt1	92	73.430	Danio_rerio
ENSIPUG00000002573	trpt1	93	45.581	ENSDNOG00000044923	TRPT1	70	46.701	Dasypus_novemcinctus
ENSIPUG00000002573	trpt1	97	52.252	ENSDORG00000001624	Trpt1	85	53.810	Dipodomys_ordii
ENSIPUG00000002573	trpt1	85	40.609	FBgn0053057	CG33057	92	40.609	Drosophila_melanogaster
ENSIPUG00000002573	trpt1	96	48.858	ENSEBUG00000012569	-	94	51.412	Eptatretus_burgeri
ENSIPUG00000002573	trpt1	97	55.263	ENSEASG00005019983	TRPT1	82	55.714	Equus_asinus_asinus
ENSIPUG00000002573	trpt1	96	55.405	ENSECAG00000009917	TRPT1	89	56.373	Equus_caballus
ENSIPUG00000002573	trpt1	96	57.207	ENSEEUG00000012739	TRPT1	82	56.667	Erinaceus_europaeus
ENSIPUG00000002573	trpt1	90	69.565	ENSELUG00000007385	trpt1	90	69.565	Esox_lucius
ENSIPUG00000002573	trpt1	96	54.054	ENSFCAG00000024621	TRPT1	88	53.005	Felis_catus
ENSIPUG00000002573	trpt1	96	55.856	ENSFDAG00000002738	TRPT1	82	56.190	Fukomys_damarensis
ENSIPUG00000002573	trpt1	92	66.190	ENSFHEG00000002434	trpt1	90	67.647	Fundulus_heteroclitus
ENSIPUG00000002573	trpt1	84	66.667	ENSGMOG00000008716	trpt1	93	66.667	Gadus_morhua
ENSIPUG00000002573	trpt1	88	49.751	ENSGALG00000050256	TRPT1	68	49.510	Gallus_gallus
ENSIPUG00000002573	trpt1	91	65.385	ENSGAFG00000016762	trpt1	93	65.385	Gambusia_affinis
ENSIPUG00000002573	trpt1	86	66.162	ENSGACG00000016927	trpt1	96	64.943	Gasterosteus_aculeatus
ENSIPUG00000002573	trpt1	99	52.863	ENSGGOG00000012163	TRPT1	82	53.110	Gorilla_gorilla
ENSIPUG00000002573	trpt1	90	67.633	ENSHBUG00000012772	trpt1	90	67.633	Haplochromis_burtoni
ENSIPUG00000002573	trpt1	96	55.405	ENSHGLG00000013748	TRPT1	82	55.714	Heterocephalus_glaber_female
ENSIPUG00000002573	trpt1	96	55.405	ENSHGLG00100013048	TRPT1	82	55.714	Heterocephalus_glaber_male
ENSIPUG00000002573	trpt1	90	64.734	ENSHCOG00000000218	trpt1	90	64.734	Hippocampus_comes
ENSIPUG00000002573	trpt1	99	52.402	ENSSTOG00000014285	TRPT1	82	54.762	Ictidomys_tridecemlineatus
ENSIPUG00000002573	trpt1	99	52.193	ENSJJAG00000010855	Trpt1	84	54.545	Jaculus_jaculus
ENSIPUG00000002573	trpt1	91	65.385	ENSKMAG00000004214	trpt1	91	65.072	Kryptolebias_marmoratus
ENSIPUG00000002573	trpt1	88	68.657	ENSLBEG00000005640	trpt1	88	68.657	Labrus_bergylta
ENSIPUG00000002573	trpt1	89	56.863	ENSLACG00000016922	TRPT1	84	56.863	Latimeria_chalumnae
ENSIPUG00000002573	trpt1	89	60.784	ENSLOCG00000001345	trpt1	83	60.784	Lepisosteus_oculatus
ENSIPUG00000002573	trpt1	98	52.863	ENSLAFG00000009075	TRPT1	81	55.024	Loxodonta_africana
ENSIPUG00000002573	trpt1	99	52.863	ENSMFAG00000036828	TRPT1	82	53.110	Macaca_fascicularis
ENSIPUG00000002573	trpt1	99	53.304	ENSMMUG00000012940	TRPT1	82	53.589	Macaca_mulatta
ENSIPUG00000002573	trpt1	99	52.863	ENSMNEG00000033348	TRPT1	82	53.110	Macaca_nemestrina
ENSIPUG00000002573	trpt1	99	53.304	ENSMLEG00000031438	TRPT1	88	49.254	Mandrillus_leucophaeus
ENSIPUG00000002573	trpt1	90	67.150	ENSMAMG00000021617	trpt1	90	67.150	Mastacembelus_armatus
ENSIPUG00000002573	trpt1	90	67.633	ENSMZEG00005004773	trpt1	90	67.633	Maylandia_zebra
ENSIPUG00000002573	trpt1	74	52.601	ENSMAUG00000014107	Trpt1	82	52.601	Mesocricetus_auratus
ENSIPUG00000002573	trpt1	99	53.712	ENSMICG00000016950	TRPT1	88	50.746	Microcebus_murinus
ENSIPUG00000002573	trpt1	96	53.153	ENSMOCG00000021342	Trpt1	83	54.286	Microtus_ochrogaster
ENSIPUG00000002573	trpt1	88	68.159	ENSMMOG00000002896	trpt1	87	67.327	Mola_mola
ENSIPUG00000002573	trpt1	93	54.884	ENSMODG00000010226	TRPT1	89	57.071	Monodelphis_domestica
ENSIPUG00000002573	trpt1	90	68.599	ENSMALG00000012208	trpt1	84	68.599	Monopterus_albus
ENSIPUG00000002573	trpt1	96	51.584	MGP_CAROLIEiJ_G0022627	Trpt1	83	52.632	Mus_caroli
ENSIPUG00000002573	trpt1	96	51.584	ENSMUSG00000047656	Trpt1	83	52.632	Mus_musculus
ENSIPUG00000002573	trpt1	97	52.018	MGP_PahariEiJ_G0014121	Trpt1	83	53.333	Mus_pahari
ENSIPUG00000002573	trpt1	96	50.909	MGP_SPRETEiJ_G0023537	Trpt1	83	51.923	Mus_spretus
ENSIPUG00000002573	trpt1	96	53.604	ENSMPUG00000013272	TRPT1	76	52.857	Mustela_putorius_furo
ENSIPUG00000002573	trpt1	90	55.981	ENSMLUG00000024858	TRPT1	82	55.714	Myotis_lucifugus
ENSIPUG00000002573	trpt1	79	53.552	ENSNGAG00000007665	Trpt1	88	53.552	Nannospalax_galili
ENSIPUG00000002573	trpt1	90	62.613	ENSNBRG00000001528	trpt1	91	62.613	Neolamprologus_brichardi
ENSIPUG00000002573	trpt1	89	42.647	ENSNLEG00000033525	-	88	40.331	Nomascus_leucogenys
ENSIPUG00000002573	trpt1	86	55.276	ENSMEUG00000000943	TRPT1	82	53.589	Notamacropus_eugenii
ENSIPUG00000002573	trpt1	96	55.856	ENSOPRG00000015917	TRPT1	83	55.714	Ochotona_princeps
ENSIPUG00000002573	trpt1	97	53.509	ENSODEG00000015724	TRPT1	83	55.714	Octodon_degus
ENSIPUG00000002573	trpt1	90	67.150	ENSONIG00000005333	trpt1	90	67.150	Oreochromis_niloticus
ENSIPUG00000002573	trpt1	87	50.246	ENSOANG00000010375	TRPT1	89	50.000	Ornithorhynchus_anatinus
ENSIPUG00000002573	trpt1	99	52.402	ENSOCUG00000022244	TRPT1	82	55.288	Oryctolagus_cuniculus
ENSIPUG00000002573	trpt1	93	63.551	ENSORLG00000025159	trpt1	93	64.078	Oryzias_latipes
ENSIPUG00000002573	trpt1	99	62.281	ENSORLG00020018944	trpt1	93	63.462	Oryzias_latipes_hni
ENSIPUG00000002573	trpt1	90	60.870	ENSORLG00015017108	trpt1	92	60.577	Oryzias_latipes_hsok
ENSIPUG00000002573	trpt1	94	61.860	ENSOMEG00000018645	trpt1	92	63.285	Oryzias_melastigma
ENSIPUG00000002573	trpt1	92	56.808	ENSOGAG00000007134	TRPT1	82	55.714	Otolemur_garnettii
ENSIPUG00000002573	trpt1	96	55.856	ENSOARG00000004961	TRPT1	81	57.212	Ovis_aries
ENSIPUG00000002573	trpt1	80	53.261	ENSPPAG00000027600	TRPT1	88	52.198	Pan_paniscus
ENSIPUG00000002573	trpt1	79	53.005	ENSPPRG00000022870	TRPT1	88	53.005	Panthera_pardus
ENSIPUG00000002573	trpt1	77	53.073	ENSPTIG00000018872	TRPT1	96	47.093	Panthera_tigris_altaica
ENSIPUG00000002573	trpt1	80	53.261	ENSPTRG00000003822	TRPT1	88	52.198	Pan_troglodytes
ENSIPUG00000002573	trpt1	99	52.863	ENSPANG00000011001	TRPT1	82	53.110	Papio_anubis
ENSIPUG00000002573	trpt1	90	69.903	ENSPKIG00000008323	trpt1	91	69.524	Paramormyrops_kingsleyae
ENSIPUG00000002573	trpt1	93	53.917	ENSPSIG00000009910	TRPT1	87	54.106	Pelodiscus_sinensis
ENSIPUG00000002573	trpt1	97	60.538	ENSPMGG00000005037	trpt1	92	63.592	Periophthalmus_magnuspinnatus
ENSIPUG00000002573	trpt1	99	50.877	ENSPEMG00000013720	Trpt1	83	52.857	Peromyscus_maniculatus_bairdii
ENSIPUG00000002573	trpt1	89	54.412	ENSPMAG00000001449	trpt1	98	54.412	Petromyzon_marinus
ENSIPUG00000002573	trpt1	97	54.018	ENSPCIG00000008060	TRPT1	84	53.333	Phascolarctos_cinereus
ENSIPUG00000002573	trpt1	91	63.942	ENSPFOG00000009475	trpt1	92	63.942	Poecilia_formosa
ENSIPUG00000002573	trpt1	91	62.981	ENSPMEG00000003682	trpt1	92	62.981	Poecilia_mexicana
ENSIPUG00000002573	trpt1	91	64.423	ENSPREG00000015408	trpt1	92	64.423	Poecilia_reticulata
ENSIPUG00000002573	trpt1	90	53.846	ENSPPYG00000003116	TRPT1	82	53.589	Pongo_abelii
ENSIPUG00000002573	trpt1	96	53.125	ENSPCAG00000000762	TRPT1	82	53.302	Procavia_capensis
ENSIPUG00000002573	trpt1	98	54.867	ENSPCOG00000010370	TRPT1	88	50.739	Propithecus_coquereli
ENSIPUG00000002573	trpt1	90	63.514	ENSPNYG00000014805	trpt1	91	63.514	Pundamilia_nyererei
ENSIPUG00000002573	trpt1	100	79.476	ENSPNAG00000008548	trpt1	100	79.039	Pygocentrus_nattereri
ENSIPUG00000002573	trpt1	96	52.703	ENSRNOG00000023023	Trpt1	83	53.810	Rattus_norvegicus
ENSIPUG00000002573	trpt1	96	54.299	ENSRBIG00000040432	TRPT1	82	53.333	Rhinopithecus_bieti
ENSIPUG00000002573	trpt1	96	54.751	ENSRROG00000044905	TRPT1	82	53.810	Rhinopithecus_roxellana
ENSIPUG00000002573	trpt1	79	33.690	YOL102C	TPT1	80	33.690	Saccharomyces_cerevisiae
ENSIPUG00000002573	trpt1	99	53.070	ENSSBOG00000021466	TRPT1	82	53.810	Saimiri_boliviensis_boliviensis
ENSIPUG00000002573	trpt1	91	68.750	ENSSFOG00015005844	trpt1	92	68.750	Scleropages_formosus
ENSIPUG00000002573	trpt1	90	65.700	ENSSMAG00000017744	trpt1	91	65.700	Scophthalmus_maximus
ENSIPUG00000002573	trpt1	90	66.667	ENSSDUG00000017106	trpt1	92	66.667	Seriola_dumerili
ENSIPUG00000002573	trpt1	88	67.164	ENSSLDG00000015957	trpt1	87	66.337	Seriola_lalandi_dorsalis
ENSIPUG00000002573	trpt1	81	64.865	ENSSPAG00000007557	trpt1	75	64.865	Stegastes_partitus
ENSIPUG00000002573	trpt1	96	55.656	ENSSSCG00000013040	TRPT1	79	56.190	Sus_scrofa
ENSIPUG00000002573	trpt1	90	66.019	ENSTRUG00000023723	trpt1	90	65.700	Takifugu_rubripes
ENSIPUG00000002573	trpt1	90	65.700	ENSTNIG00000003381	trpt1	90	65.700	Tetraodon_nigroviridis
ENSIPUG00000002573	trpt1	92	53.081	ENSTBEG00000006023	TRPT1	82	53.110	Tupaia_belangeri
ENSIPUG00000002573	trpt1	96	53.846	ENSTTRG00000010252	TRPT1	82	54.067	Tursiops_truncatus
ENSIPUG00000002573	trpt1	99	52.193	ENSUAMG00000015208	TRPT1	82	54.286	Ursus_americanus
ENSIPUG00000002573	trpt1	99	52.193	ENSUMAG00000001410	TRPT1	82	54.286	Ursus_maritimus
ENSIPUG00000002573	trpt1	92	56.132	ENSVVUG00000029774	TRPT1	85	56.190	Vulpes_vulpes
ENSIPUG00000002573	trpt1	98	52.889	ENSXETG00000007196	trpt1	88	55.122	Xenopus_tropicalis
ENSIPUG00000002573	trpt1	86	64.646	ENSXCOG00000001614	trpt1	94	61.722	Xiphophorus_couchianus
ENSIPUG00000002573	trpt1	90	63.768	ENSXMAG00000003142	trpt1	93	63.768	Xiphophorus_maculatus