EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000002613 (Gene tree)
Gene ID
108273729
Gene Symbol
Polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
11575 bases
Position
chr13:2069475-2081049
Accession
108273729
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000003791RNA_pol_Rpb1_5PF04998.177.6e-10211
ENSIPUP00000003782RNA_pol_Rpb1_5PF04998.178e-10211
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29131
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29231
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29331
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29431
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29531
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29631
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29731
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29831
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-29931
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291031
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291131
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291231
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291331
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291431
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291531
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291631
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291731
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291831
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-291931
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292031
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292131
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292231
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292331
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292431
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292531
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292631
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292731
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292831
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-292931
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-293031
ENSIPUP00000003791RNA_pol_Rpb1_RPF05001.134e-293131
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23132
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23232
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23332
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23432
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23532
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23632
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23732
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23832
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-23932
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231032
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231132
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231232
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231332
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231432
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231532
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231632
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231732
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231832
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-231932
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232032
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232132
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232232
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232332
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232432
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232532
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232632
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232732
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232832
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-232932
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-233032
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-233132
ENSIPUP00000003782RNA_pol_Rpb1_RPF05001.138.5e-233232
ENSIPUP00000003791RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSIPUP00000003782RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSIPUP00000003791RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSIPUP00000003782RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSIPUP00000003791RNA_pol_Rpb1_3PF04983.183.2e-5011
ENSIPUP00000003782RNA_pol_Rpb1_3PF04983.183.3e-5011
ENSIPUP00000003791RNA_pol_Rpb1_1PF04997.129.8e-10811
ENSIPUP00000003782RNA_pol_Rpb1_1PF04997.121e-10711
ENSIPUP00000003791RNA_pol_Rpb1_7PF04990.121.6e-5411
ENSIPUP00000003782RNA_pol_Rpb1_7PF04990.121.6e-5411
ENSIPUP00000003791RNA_pol_Rpb1_6PF04992.146.6e-6711
ENSIPUP00000003782RNA_pol_Rpb1_6PF04992.146.9e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000003961-5901XM_017483182ENSIPUP000000037821966 (aa)XP_017338671W5UD45
ENSIPUT00000003971-5787-ENSIPUP000000037911928 (aa)--
Gene Model
Click here to download ENSIPUG00000002613's gene model file
Pathways
Pathway IDPathway NameSource
ipu03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000002613's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000002613Polr2a5733.040ENSIPUG00000013174polr1a6733.223
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000002613Polr2a8797.022ENSAPOG00000006552polr2a9097.022Acanthochromis_polyacanthus
ENSIPUG00000002613Polr2a8293.804ENSAMEG00000016265-8293.812Ailuropoda_melanoleuca
ENSIPUG00000002613Polr2a10097.303ENSACIG00000015982polr2a10097.303Amphilophus_citrinellus
ENSIPUG00000002613Polr2a9597.205ENSAOCG00000004255polr2a9397.205Amphiprion_ocellaris
ENSIPUG00000002613Polr2a10097.718ENSAPEG00000012623polr2a10097.718Amphiprion_percula
ENSIPUG00000002613Polr2a10097.407ENSATEG00000019644polr2a10097.407Anabas_testudineus
ENSIPUG00000002613Polr2a8294.286ENSACAG00000014561POLR2A8294.293Anolis_carolinensis
ENSIPUG00000002613Polr2a8294.165ENSANAG00000020093-8294.222Aotus_nancymaae
ENSIPUG00000002613Polr2a10097.355ENSACLG00000006735polr2a10097.355Astatotilapia_calliptera
ENSIPUG00000002613Polr2a10098.728ENSAMXG00000020046polr2a10098.728Astyanax_mexicanus
ENSIPUG00000002613Polr2a8294.165ENSBTAG00000046765POLR2A8294.172Bos_taurus
ENSIPUG00000002613Polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSIPUG00000002613Polr2a8694.103ENSCAFG00000016532POLR2A9994.110Canis_familiaris
ENSIPUG00000002613Polr2a8293.238ENSCAFG00020007929-8293.247Canis_lupus_dingo
ENSIPUG00000002613Polr2a8294.165ENSCHIG00000027173-8294.172Capra_hircus
ENSIPUG00000002613Polr2a9291.731ENSTSYG00000012803-8591.460Carlito_syrichta
ENSIPUG00000002613Polr2a9890.828ENSCAPG00000001882-10093.363Cavia_aperea
ENSIPUG00000002613Polr2a9988.495ENSCPOG00000014812-10092.994Cavia_porcellus
ENSIPUG00000002613Polr2a8294.165ENSCCAG00000020938-8294.222Cebus_capucinus
ENSIPUG00000002613Polr2a8294.165ENSCATG00000013680-8294.172Cercocebus_atys
ENSIPUG00000002613Polr2a8294.041ENSCLAG00000012196-8294.095Chinchilla_lanigera
ENSIPUG00000002613Polr2a8285.441ENSCSAG00000011644-8285.459Chlorocebus_sabaeus
ENSIPUG00000002613Polr2a9084.025ENSCPBG00000012697POLR2A9985.788Chrysemys_picta_bellii
ENSIPUG00000002613Polr2a9876.988ENSCING00000007884-9977.551Ciona_intestinalis
ENSIPUG00000002613Polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSIPUG00000002613Polr2a8293.482ENSCANG00000010622-8293.490Colobus_angolensis_palliatus
ENSIPUG00000002613Polr2a8188.938ENSCGRG00001003538Polr2a8586.463Cricetulus_griseus_chok1gshd
ENSIPUG00000002613Polr2a8290.429ENSCGRG00000012105Polr2a9390.441Cricetulus_griseus_crigri
ENSIPUG00000002613Polr2a9996.886ENSCSEG00000002635polr2a10096.886Cynoglossus_semilaevis
ENSIPUG00000002613Polr2a10097.406ENSCVAG00000005156polr2a10097.406Cyprinodon_variegatus
ENSIPUG00000002613Polr2a10097.509ENSDARG00000099966polr2a10097.509Danio_rerio
ENSIPUG00000002613Polr2a8291.248ENSDNOG00000016482-8290.623Dasypus_novemcinctus
ENSIPUG00000002613Polr2a8294.165ENSDORG00000008667Polr2a8294.222Dipodomys_ordii
ENSIPUG00000002613Polr2a9969.794FBgn0003277RpII2159974.051Drosophila_melanogaster
ENSIPUG00000002613Polr2a9489.593ENSETEG00000002540-8790.668Echinops_telfairi
ENSIPUG00000002613Polr2a8286.962ENSEBUG00000013967polr2a8286.948Eptatretus_burgeri
ENSIPUG00000002613Polr2a8292.179ENSEASG00005019114-8392.188Equus_asinus_asinus
ENSIPUG00000002613Polr2a8294.165ENSECAG00000018485POLR2A8294.172Equus_caballus
ENSIPUG00000002613Polr2a8593.925ENSEEUG00000001154-9593.925Erinaceus_europaeus
ENSIPUG00000002613Polr2a8895.205ENSELUG00000014284polr2a8495.205Esox_lucius
ENSIPUG00000002613Polr2a8294.227ENSFDAG00000008287-8294.234Fukomys_damarensis
ENSIPUG00000002613Polr2a9997.077ENSFHEG00000001768polr2a10097.077Fundulus_heteroclitus
ENSIPUG00000002613Polr2a9992.711ENSGMOG00000007725polr2a10092.736Gadus_morhua
ENSIPUG00000002613Polr2a99100.000ENSGAFG00000005389polr2a10093.859Gambusia_affinis
ENSIPUG00000002613Polr2a9992.926ENSGACG00000019366polr2a10092.696Gasterosteus_aculeatus
ENSIPUG00000002613Polr2a8292.074ENSGGOG00000014800-9692.792Gorilla_gorilla
ENSIPUG00000002613Polr2a9997.265ENSHBUG00000018937polr2a10097.219Haplochromis_burtoni
ENSIPUG00000002613Polr2a8294.227ENSHGLG00000012381POLR2A8294.286Heterocephalus_glaber_female
ENSIPUG00000002613Polr2a8294.227ENSHGLG00100014843POLR2A8294.286Heterocephalus_glaber_male
ENSIPUG00000002613Polr2a10096.999ENSHCOG00000011874polr2a10096.999Hippocampus_comes
ENSIPUG00000002613Polr2a8294.165ENSSTOG00000001304-8294.222Ictidomys_tridecemlineatus
ENSIPUG00000002613Polr2a8294.289ENSJJAG00000013049Polr2a8294.349Jaculus_jaculus
ENSIPUG00000002613Polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSIPUG00000002613Polr2a9997.353ENSLBEG00000027652polr2a10097.353Labrus_bergylta
ENSIPUG00000002613Polr2a8085.326ENSLACG00000012071POLR2A8185.398Latimeria_chalumnae
ENSIPUG00000002613Polr2a8996.723ENSLOCG00000013863polr2a9796.276Lepisosteus_oculatus
ENSIPUG00000002613Polr2a9990.953ENSLAFG00000008626-9794.172Loxodonta_africana
ENSIPUG00000002613Polr2a5193.054ENSMFAG00000007042-9993.054Macaca_fascicularis
ENSIPUG00000002613Polr2a8294.165ENSMMUG00000023620-9194.172Macaca_mulatta
ENSIPUG00000002613Polr2a8293.731ENSMNEG00000040407-8293.738Macaca_nemestrina
ENSIPUG00000002613Polr2a8089.937ENSMLEG00000030263-9993.054Mandrillus_leucophaeus
ENSIPUG00000002613Polr2a10097.304ENSMAMG00000003351polr2a10097.304Mastacembelus_armatus
ENSIPUG00000002613Polr2a10097.304ENSMZEG00005021429polr2a10097.304Maylandia_zebra
ENSIPUG00000002613Polr2a5194.292ENSMAUG00000021055-9994.292Mesocricetus_auratus
ENSIPUG00000002613Polr2a8294.165ENSMICG00000013372-9893.552Microcebus_murinus
ENSIPUG00000002613Polr2a9991.751ENSMOCG00000018279Polr2a10091.762Microtus_ochrogaster
ENSIPUG00000002613Polr2a9096.402ENSMMOG00000012515polr2a9296.402Mola_mola
ENSIPUG00000002613Polr2a8294.103ENSMODG00000007009-8294.110Monodelphis_domestica
ENSIPUG00000002613Polr2a9494.238ENSMALG00000008716polr2a9997.205Monopterus_albus
ENSIPUG00000002613Polr2a8294.165MGP_CAROLIEiJ_G0016587Polr2a8294.222Mus_caroli
ENSIPUG00000002613Polr2a8294.165ENSMUSG00000005198Polr2a8294.222Mus_musculus
ENSIPUG00000002613Polr2a8292.027MGP_PahariEiJ_G0017718Polr2a8292.037Mus_pahari
ENSIPUG00000002613Polr2a8294.165MGP_SPRETEiJ_G0017423Polr2a8294.222Mus_spretus
ENSIPUG00000002613Polr2a8294.165ENSMPUG00000009648-8294.172Mustela_putorius_furo
ENSIPUG00000002613Polr2a8293.552ENSMLUG00000009088-8293.560Myotis_lucifugus
ENSIPUG00000002613Polr2a8294.165ENSNGAG00000002543Polr2a8294.222Nannospalax_galili
ENSIPUG00000002613Polr2a10097.459ENSNBRG00000002005polr2a10097.459Neolamprologus_brichardi
ENSIPUG00000002613Polr2a8194.215ENSNLEG00000009460-8294.222Nomascus_leucogenys
ENSIPUG00000002613Polr2a9495.643ENSMEUG00000008611-9686.840Notamacropus_eugenii
ENSIPUG00000002613Polr2a8093.872ENSOPRG00000015116-9993.872Ochotona_princeps
ENSIPUG00000002613Polr2a8793.921ENSODEG00000017674-8589.367Octodon_degus
ENSIPUG00000002613Polr2a10097.457ENSONIG00000009231polr2a10097.457Oreochromis_niloticus
ENSIPUG00000002613Polr2a9990.115ENSOCUG00000017929-10094.048Oryctolagus_cuniculus
ENSIPUG00000002613Polr2a10097.407ENSORLG00000006431polr2a10097.407Oryzias_latipes
ENSIPUG00000002613Polr2a10097.407ENSORLG00020010235polr2a10097.407Oryzias_latipes_hni
ENSIPUG00000002613Polr2a10097.304ENSORLG00015007075polr2a10097.304Oryzias_latipes_hsok
ENSIPUG00000002613Polr2a9897.581ENSOMEG00000010713polr2a10096.640Oryzias_melastigma
ENSIPUG00000002613Polr2a8294.165ENSOGAG00000033608-8294.172Otolemur_garnettii
ENSIPUG00000002613Polr2a9194.165ENSOARG00000013874-9091.321Ovis_aries
ENSIPUG00000002613Polr2a8194.114ENSPPAG00000043734-8989.785Pan_paniscus
ENSIPUG00000002613Polr2a8194.215ENSPTRG00000008691POLR2A8294.222Pan_troglodytes
ENSIPUG00000002613Polr2a8293.482ENSPANG00000024099-8293.524Papio_anubis
ENSIPUG00000002613Polr2a7795.753ENSPKIG00000005727polr2a8580.702Paramormyrops_kingsleyae
ENSIPUG00000002613Polr2a9892.588ENSPSIG00000014006POLR2A10092.503Pelodiscus_sinensis
ENSIPUG00000002613Polr2a10096.166ENSPMGG00000019734polr2a10096.166Periophthalmus_magnuspinnatus
ENSIPUG00000002613Polr2a8294.165ENSPEMG00000012521Polr2a8294.222Peromyscus_maniculatus_bairdii
ENSIPUG00000002613Polr2a8694.107ENSPCIG00000028851-8294.107Phascolarctos_cinereus
ENSIPUG00000002613Polr2a9997.256ENSPFOG00000007890polr2a9997.256Poecilia_formosa
ENSIPUG00000002613Polr2a9997.256ENSPLAG00000007399polr2a9997.256Poecilia_latipinna
ENSIPUG00000002613Polr2a10097.254ENSPMEG00000002071polr2a9997.256Poecilia_mexicana
ENSIPUG00000002613Polr2a10097.304ENSPREG00000013122polr2a10097.304Poecilia_reticulata
ENSIPUG00000002613Polr2a8294.165ENSPPYG00000007924-8294.172Pongo_abelii
ENSIPUG00000002613Polr2a7395.132ENSPCAG00000006951-7495.132Procavia_capensis
ENSIPUG00000002613Polr2a8194.215ENSPCOG00000025260-8294.222Propithecus_coquereli
ENSIPUG00000002613Polr2a8293.855ENSPVAG00000005069-8293.862Pteropus_vampyrus
ENSIPUG00000002613Polr2a10097.355ENSPNYG00000022340polr2a10097.355Pundamilia_nyererei
ENSIPUG00000002613Polr2a10098.678ENSPNAG00000011237polr2a10098.678Pygocentrus_nattereri
ENSIPUG00000002613Polr2a8294.103ENSRNOG00000028834Polr2a8294.110Rattus_norvegicus
ENSIPUG00000002613Polr2a8293.793ENSRBIG00000002471-9193.800Rhinopithecus_bieti
ENSIPUG00000002613Polr2a8294.165ENSRROG00000029583-8993.304Rhinopithecus_roxellana
ENSIPUG00000002613Polr2a8449.908YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSIPUG00000002613Polr2a8294.165ENSSBOG00000000808-8294.222Saimiri_boliviensis_boliviensis
ENSIPUG00000002613Polr2a9394.103ENSSHAG00000002858-8494.110Sarcophilus_harrisii
ENSIPUG00000002613Polr2a9997.409ENSSFOG00015023275polr2a10097.409Scleropages_formosus
ENSIPUG00000002613Polr2a10094.812ENSSMAG00000009137polr2a10094.303Scophthalmus_maximus
ENSIPUG00000002613Polr2a10097.562ENSSDUG00000020466polr2a10097.562Seriola_dumerili
ENSIPUG00000002613Polr2a10097.562ENSSLDG00000020613polr2a10097.562Seriola_lalandi_dorsalis
ENSIPUG00000002613Polr2a9589.713ENSSARG00000005875-9990.520Sorex_araneus
ENSIPUG00000002613Polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSIPUG00000002613Polr2a8293.234ENSSSCG00000028278-8293.242Sus_scrofa
ENSIPUG00000002613Polr2a9891.569ENSTRUG00000012320polr2a8191.569Takifugu_rubripes
ENSIPUG00000002613Polr2a9595.782ENSTNIG00000010136polr2a10095.782Tetraodon_nigroviridis
ENSIPUG00000002613Polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSIPUG00000002613Polr2a8292.489ENSTTRG00000014273-8292.498Tursiops_truncatus
ENSIPUG00000002613Polr2a9393.786ENSUAMG00000014866-10091.218Ursus_americanus
ENSIPUG00000002613Polr2a7491.213ENSUMAG00000015732-8391.061Ursus_maritimus
ENSIPUG00000002613Polr2a6597.283ENSVPAG00000008842-7697.283Vicugna_pacos
ENSIPUG00000002613Polr2a8294.103ENSVVUG00000027878-8394.110Vulpes_vulpes
ENSIPUG00000002613Polr2a8193.896ENSXETG00000012465polr2a8293.903Xenopus_tropicalis
ENSIPUG00000002613Polr2a9396.887ENSXCOG00000001804polr2a9596.887Xiphophorus_couchianus
ENSIPUG00000002613Polr2a10097.459ENSXMAG00000015687polr2a10097.459Xiphophorus_maculatus

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